Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0569
         (678 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0FDQ8 Cluster: Putative uncharacterized protein; n=1; ...   116   5e-25
UniRef50_A6GC45 Cluster: Serine/threonine protein kinase Pkn6; n...    33   6.4  
UniRef50_A2C3Y0 Cluster: Putative uncharacterized protein; n=2; ...    33   6.4  
UniRef50_Q9RA04 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  
UniRef50_Q0RSY4 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  

>UniRef50_A0FDQ8 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 272

 Score =  116 bits (279), Expect = 5e-25
 Identities = 55/56 (98%), Positives = 56/56 (100%)
 Frame = -3

Query: 676 EGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPAD 509
           EGSADSAAIIPNMVKKIDLAPTVESDAAA+PEIKTPEAADAPKLADNPVDEDKPAD
Sbjct: 152 EGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPAD 207


>UniRef50_A6GC45 Cluster: Serine/threonine protein kinase Pkn6; n=1;
           Plesiocystis pacifica SIR-1|Rep: Serine/threonine
           protein kinase Pkn6 - Plesiocystis pacifica SIR-1
          Length = 609

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = -3

Query: 664 DSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPA 512
           D A  +P    +   APT  + A   PE     A + P  AD PV ED+PA
Sbjct: 458 DEAPTMPAAPVEPSPAPTQPAPAEPAPEEPAEPAPEEPAPADEPVVEDEPA 508


>UniRef50_A2C3Y0 Cluster: Putative uncharacterized protein; n=2;
           Prochlorococcus marinus|Rep: Putative uncharacterized
           protein - Prochlorococcus marinus (strain NATL1A)
          Length = 190

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = -3

Query: 670 SADSAAIIPNMV--KKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPAD 509
           S+DS++ I N+V  K I+    VE D     E   P   D P   D PV+EDKP +
Sbjct: 61  SSDSSSSIDNIVEIKPIEEDKPVEEDKPV--EEDKPVEEDKPVEEDKPVEEDKPVE 114


>UniRef50_Q9RA04 Cluster: Putative uncharacterized protein; n=1;
           Rhodococcus erythropolis|Rep: Putative uncharacterized
           protein - Rhodococcus erythropolis
          Length = 283

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +2

Query: 8   TKKPLLLLMLSEIR*FTSTNNY-IVGNF*FHYLNKSLGLGNRQLSTSV*RTPLSLTWGSF 184
           T K ++L  LS I   T+ N Y ++G F   Y  K+ GLG  +L  +      ++TWG F
Sbjct: 132 TPKQVVLAALSFIG--TNGNGYMVIGGFIVAYATKTYGLGKTELLIAT--LASAVTWGVF 187

Query: 185 THI 193
           T I
Sbjct: 188 TMI 190


>UniRef50_Q0RSY4 Cluster: Putative uncharacterized protein; n=1;
           Frankia alni ACN14a|Rep: Putative uncharacterized
           protein - Frankia alni (strain ACN14a)
          Length = 615

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -3

Query: 628 IDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPAD 509
           +DL     +D  A  ++  P  ADAP   D P D D PAD
Sbjct: 204 VDLDLDAPADLDAPADLDAPADADAPADLDAPADRDAPAD 243


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,036,282
Number of Sequences: 1657284
Number of extensions: 7461763
Number of successful extensions: 21706
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21651
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)