Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0568
         (593 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.5  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   4.5  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   5.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   5.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   5.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   5.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   7.8  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.8  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 443 DNVTNVCPYTLNVFDLNTDQIIVNTCYDQK 532
           +N+ +  PY+   F  N D +IVN    +K
Sbjct: 413 NNLLDKKPYSTYKFPTNFDALIVNEMRSEK 442


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 443 DNVTNVCPYTLNVFDLNTDQIIVNTCYDQK 532
           +N+ +  PY+   F  N D +IVN    +K
Sbjct: 305 NNLLDKKPYSTYKFPTNFDALIVNEMRSEK 334


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 348 NSLPSKLG*GVNFGDGSYGASS 283
           N+ PS      NF + S GASS
Sbjct: 129 NNTPSATNNNTNFNNNSNGASS 150


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory
          receptor candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 29 NGSEVFSFLWASLT 70
          NG +VF F W  LT
Sbjct: 42 NGKKVFKFAWWPLT 55


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory
          receptor candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 29 NGSEVFSFLWASLT 70
          NG +VF F W  LT
Sbjct: 42 NGKKVFKFAWWPLT 55


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 348 NSLPSKLG*GVNFGDGSYGASS 283
           N+ PS      NF + S GASS
Sbjct: 77  NNTPSATNNNTNFNNNSNGASS 98


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 348 NSLPSKLG*GVNFGDGSYGASS 283
           N+ PS      NF + S GASS
Sbjct: 260 NNTPSATNNNTNFNNNSNGASS 281


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 445 QRYKCVPVHAQCI*LEH*SNHRKYVLRPEDI 537
           +R +     AQ + LE   +H KY+ RP  I
Sbjct: 89  KRARTAYTSAQLVELEREFHHGKYLSRPRRI 119


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 164 DWCSDTRERTARWYRKVEEQIV 229
           D C+   ++T  W  K++EQ V
Sbjct: 299 DACTIASKQTISWCYKLQEQFV 320


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 164 DWCSDTRERTARWYRKVEEQIV 229
           D C+   ++T  W  K++EQ V
Sbjct: 299 DACTIASKQTISWCYKLQEQFV 320


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 445 QRYKCVPVHAQCI*LEH*SNHRKYVLRPEDI 537
           +R +     AQ + LE   +H KY+ RP  I
Sbjct: 80  KRARTAYTSAQLVELEREFHHGKYLSRPRRI 110


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 409 TITLVCFDPVYSSQSC 362
           T++  C+D  Y++Q C
Sbjct: 68  TLSKACYDCPYNTQDC 83


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +3

Query: 117 VDWNYPDQFSKQQALRTGALIPENALPVG 203
           +DW YP+   K+  +     I E   P G
Sbjct: 143 IDWEYPEAKDKENFITLLREIKEAFQPKG 171


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 214 GGTNCSSAFLGGAQYP 261
           GG++ S A+L  A YP
Sbjct: 25  GGSSSSMAYLKSAPYP 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,927
Number of Sequences: 336
Number of extensions: 3211
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)