Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0567
         (690 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014135-147|AAS64612.1| 1579|Drosophila melanogaster CG11148-PC...    30   3.4  
AE014135-146|AAS64611.1| 1579|Drosophila melanogaster CG11148-PB...    30   3.4  
AE014135-145|AAF59406.2| 1572|Drosophila melanogaster CG11148-PA...    30   3.4  

>AE014135-147|AAS64612.1| 1579|Drosophila melanogaster CG11148-PC,
           isoform C protein.
          Length = 1579

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +1

Query: 310 REQGDSLRACHVKITSTHSTLHHLIPT-VCIQEHNLGNIVDQLCTSLQDIKDHEDSVIGM 486
           R  G+ ++ CH  +  THS   HL+P+ + ++   +G I   L  SL  I  H+ S I +
Sbjct: 611 RPLGELIKFCHGNMPFTHS---HLLPSPIELENIPVGQIPAPLTASL-SITPHKPSPIPI 666

Query: 487 PTCSIEQE 510
               +EQ+
Sbjct: 667 ALSVVEQQ 674


>AE014135-146|AAS64611.1| 1579|Drosophila melanogaster CG11148-PB,
           isoform B protein.
          Length = 1579

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +1

Query: 310 REQGDSLRACHVKITSTHSTLHHLIPT-VCIQEHNLGNIVDQLCTSLQDIKDHEDSVIGM 486
           R  G+ ++ CH  +  THS   HL+P+ + ++   +G I   L  SL  I  H+ S I +
Sbjct: 611 RPLGELIKFCHGNMPFTHS---HLLPSPIELENIPVGQIPAPLTASL-SITPHKPSPIPI 666

Query: 487 PTCSIEQE 510
               +EQ+
Sbjct: 667 ALSVVEQQ 674


>AE014135-145|AAF59406.2| 1572|Drosophila melanogaster CG11148-PA,
           isoform A protein.
          Length = 1572

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +1

Query: 310 REQGDSLRACHVKITSTHSTLHHLIPT-VCIQEHNLGNIVDQLCTSLQDIKDHEDSVIGM 486
           R  G+ ++ CH  +  THS   HL+P+ + ++   +G I   L  SL  I  H+ S I +
Sbjct: 604 RPLGELIKFCHGNMPFTHS---HLLPSPIELENIPVGQIPAPLTASL-SITPHKPSPIPI 659

Query: 487 PTCSIEQE 510
               +EQ+
Sbjct: 660 ALSVVEQQ 667


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,235,940
Number of Sequences: 53049
Number of extensions: 718277
Number of successful extensions: 1556
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1556
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)