Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0567
         (690 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032623-15|CAJ76975.1|  260|Caenorhabditis elegans Hypothetical...    31   1.0  
AL032623-2|CAD54165.1|  312|Caenorhabditis elegans Hypothetical ...    31   1.0  
AL032623-1|CAA21508.2|  309|Caenorhabditis elegans Hypothetical ...    31   1.0  
U80843-9|AAB37969.1|  392|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z83106-6|CAB05497.2|  339|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical...    27   9.6  

>AL032623-15|CAJ76975.1|  260|Caenorhabditis elegans Hypothetical
           protein Y43F8B.1c protein.
          Length = 260

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = -1

Query: 594 QVEADNTAKVTLALSSELEMQRNIDVQPLLFYRTRWHTY--DRIFVIFYVLETSTQ 433
           +++     K+++   SE E+QR I  QP  +++ +W+ +  +  + I  V +T TQ
Sbjct: 37  EIQLPQVGKISIPELSEKEIQRTIVAQPASYHKVQWNEFPEEPKYEIGAVPKTKTQ 92


>AL032623-2|CAD54165.1|  312|Caenorhabditis elegans Hypothetical
           protein Y43F8B.1b protein.
          Length = 312

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = -1

Query: 594 QVEADNTAKVTLALSSELEMQRNIDVQPLLFYRTRWHTY--DRIFVIFYVLETSTQ 433
           +++     K+++   SE E+QR I  QP  +++ +W+ +  +  + I  V +T TQ
Sbjct: 86  EIQLPQVGKISIPELSEKEIQRTIVAQPASYHKVQWNEFPEEPKYEIGAVPKTKTQ 141


>AL032623-1|CAA21508.2|  309|Caenorhabditis elegans Hypothetical
           protein Y43F8B.1a protein.
          Length = 309

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = -1

Query: 594 QVEADNTAKVTLALSSELEMQRNIDVQPLLFYRTRWHTY--DRIFVIFYVLETSTQ 433
           +++     K+++   SE E+QR I  QP  +++ +W+ +  +  + I  V +T TQ
Sbjct: 86  EIQLPQVGKISIPELSEKEIQRTIVAQPASYHKVQWNEFPEEPKYEIGAVPKTKTQ 141


>U80843-9|AAB37969.1|  392|Caenorhabditis elegans Hypothetical
           protein C32B5.14 protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 415 GNIVDQLCTSLQDIKDHEDSVIGMPTCSIEQERLYVNITL 534
           G I      S+ D++D   S  G+P C +E  RL  N+TL
Sbjct: 90  GEIEQDPDESIIDVRDGFLSKKGIPECEMETARLVHNLTL 129


>Z83106-6|CAB05497.2|  339|Caenorhabditis elegans Hypothetical
           protein F22B8.7 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 191 KDRFIHTAHGDSKMDSRDLCARWCLITTDTIKGRMRK 301
           +D++     GD+ ++    C R  L T D +KG M K
Sbjct: 247 EDKWAEIRIGDAHLECFAPCTRCVLTTVDPVKGEMSK 283


>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
            protein Y26D4A.9 protein.
          Length = 1435

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 44   VHEVRYSLLASDNAIAKILRVKRCIISRIETLA 142
            VH V+ + +  +N I K +  KR ++  I TLA
Sbjct: 1394 VHSVQQNKVVLNNMIGKDVEAKRYVVDNIHTLA 1426


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,032,383
Number of Sequences: 27780
Number of extensions: 371303
Number of successful extensions: 924
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)