Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0566
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.52 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.69 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   2.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   3.7  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   4.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.9  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
 Frame = -1

Query: 198  TEKPSTLTGKLVV-PWSWTTPCMSTLTRDEAVTSWGSRP-RGDVSTCSSAVFRRAVICPV 25
            T KPST        PW  TT    T T     TS  +RP   +  T  + +   AV+ P 
Sbjct: 1036 TTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPE 1095

Query: 24   TPVVVQP 4
                 QP
Sbjct: 1096 VDKPSQP 1102



 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/40 (32%), Positives = 15/40 (37%)
 Frame = +3

Query: 129  WTCRASSRTRAPPTFRSTSKVSPCTRPCTRPVRTCAAWCT 248
            W   A    + P    STS     T+P  RP  T   W T
Sbjct: 1146 WPKSAKCEEKKPGHKPSTSSWQKPTKPSYRPPSTTNHWQT 1185


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -2

Query: 332  TSPRRAASWHRGRTPRRVADTARAEGHARAPRSAGPD 222
            TSPR+ A  H G   R  A  A ++  +  PRS   D
Sbjct: 917  TSPRQPAETHAGSPCRNSASPASSD-RSGTPRSTNGD 952


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 479 CRKASSSVAPQHSAPAPLSTTT 414
           C +ASSS  P HS+ +  S  +
Sbjct: 196 CSEASSSPTPSHSSESSFSAAS 217


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 287 RRVADTARAEGHARAPRSAGP 225
           R   D A A G ARA  + GP
Sbjct: 282 RAAGDAAAARGAARADGAGGP 302


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -1

Query: 630 GPRATCSRRGRLAGTPRT 577
           GP   C   G L GTP T
Sbjct: 58  GPSICCGPFGCLVGTPET 75


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 155 QGTTNFPVNVEGFSVHASVHA 217
           +GTT+  +NV    +H S  A
Sbjct: 429 EGTTSILINVPSLIIHVSTSA 449


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 147 SRTRAPPTFRSTSKVSPCTRPCTRP 221
           S T  PPT  +T++ +  T+  T+P
Sbjct: 157 SSTPLPPTTSTTTRTTLTTKFTTKP 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,652
Number of Sequences: 336
Number of extensions: 2262
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)