Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0566
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    27   0.49 
DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domai...    26   1.1  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    25   1.5  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    25   1.5  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    25   1.5  
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           24   4.6  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           24   4.6  

>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 27.1 bits (57), Expect = 0.49
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -1

Query: 270 GESGGPRTCTTQRRSGRAACTDACTE 193
           G S   RTC   RR    ACT  C E
Sbjct: 69  GSSCDDRTCENIRRGDHLACTKHCVE 94


>DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 270 GESGGPRTCTTQRRSGRAACTDAC 199
           G + G RTCT QR++  +AC  +C
Sbjct: 71  GPACGDRTCTNQRKND-SACRRSC 93


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 229 PALRGARAWPSALAVSATRRGVLP--LCQEAALLGEVAYHTLPYG 357
           P+ RG + W   L  +    G +P  L  +A+LLGE  + + PYG
Sbjct: 71  PSPRGTK-W--GLGGTCVNVGCIPKKLMHQASLLGEAIHDSQPYG 112



 Score = 23.8 bits (49), Expect = 4.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 397 LGPHAKVVVLSGAGALCCGATLE 465
           LGP A  V+   A AL CG T++
Sbjct: 471 LGPAAGEVIQGFAAALKCGLTMQ 493


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 229 PALRGARAWPSALAVSATRRGVLP--LCQEAALLGEVAYHTLPYG 357
           P+ RG + W   L  +    G +P  L  +A+LLGE  + + PYG
Sbjct: 47  PSPRGTK-W--GLGGTCVNVGCIPKKLMHQASLLGEAIHDSQPYG 88



 Score = 23.8 bits (49), Expect = 4.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 397 LGPHAKVVVLSGAGALCCGATLE 465
           LGP A  V+   A AL CG T++
Sbjct: 447 LGPAAGEVIQGFAAALKCGLTMQ 469


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 229 PALRGARAWPSALAVSATRRGVLP--LCQEAALLGEVAYHTLPYG 357
           P+ RG + W   L  +    G +P  L  +A+LLGE  + + PYG
Sbjct: 44  PSPRGTK-W--GLGGTCVNVGCIPKKLMHQASLLGEAIHDSQPYG 85



 Score = 23.8 bits (49), Expect = 4.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 397 LGPHAKVVVLSGAGALCCGATLE 465
           LGP A  V+   A AL CG T++
Sbjct: 444 LGPAAGEVIQGFAAALKCGLTMQ 466


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -2

Query: 470 ASSSVAPQHSAPAPLSTTTLA 408
           A+++VAP  +  AP +TTT+A
Sbjct: 32  ATTTVAPTTTTVAPTTTTTVA 52


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -2

Query: 470 ASSSVAPQHSAPAPLSTTTLA 408
           A+++VAP  +  AP +TTT+A
Sbjct: 32  ATTTVAPTTTTVAPTTTTTVA 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,525
Number of Sequences: 2352
Number of extensions: 11324
Number of successful extensions: 40
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)