BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0566 (630 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z75953-4|CAJ85747.1| 294|Caenorhabditis elegans Hypothetical pr... 85 4e-17 Z75953-3|CAB00100.1| 611|Caenorhabditis elegans Hypothetical pr... 85 4e-17 AF166171-1|AAD49860.1| 611|Caenorhabditis elegans adducin-head-... 85 4e-17 AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-relat... 70 1e-12 AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-relat... 70 1e-12 AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin prote... 70 1e-12 AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin prote... 70 1e-12 AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin prote... 70 1e-12 AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin prote... 70 1e-12 AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin prote... 70 1e-12 Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 29 2.1 Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 3.6 Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 29 3.6 X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 29 3.6 Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical pr... 28 6.3 Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein. 28 6.3 U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein... 28 6.3 U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein... 28 6.3 U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 27 8.4 >Z75953-4|CAJ85747.1| 294|Caenorhabditis elegans Hypothetical protein F57F5.4b protein. Length = 294 Score = 85.0 bits (201), Expect = 4e-17 Identities = 38/86 (44%), Positives = 59/86 (68%) Frame = +2 Query: 2 FGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQGVVQDQGTTNFPVN 181 F W+ G+ IT R++T +++L + G L EV+ASSL+KVD+ G V D G+TNF VN Sbjct: 54 FRWSQ-GIYNHITVRVSTDPDEILINAFGQLYSEVSASSLIKVDLDGTVIDGGSTNFGVN 112 Query: 182 VEGFSVHASVHAARPDLRCVVHVRGP 259 G+ +H+++H RP+++CVVH+ P Sbjct: 113 QAGYVLHSAIHNGRPEVKCVVHLHHP 138 Score = 60.9 bits (141), Expect = 7e-10 Identities = 31/72 (43%), Positives = 46/72 (63%) Frame = +1 Query: 256 PSALAVSATRRGVLPLCQEAALLGEVAYHTLPYGVLDNAERDKLVRALGPHAKVVVLSGA 435 PS +AVSA + G+LP+ QE+ ++G+V YH ++D AER LVR LG V++L Sbjct: 138 PSVVAVSAQKCGLLPISQESMIVGDVGYHEYRGILIDEAERALLVRDLGDR-NVMILRNH 196 Query: 436 GALCCGATLEEA 471 G + CG ++E A Sbjct: 197 GFVVCGESIEHA 208 >Z75953-3|CAB00100.1| 611|Caenorhabditis elegans Hypothetical protein F57F5.4a protein. Length = 611 Score = 85.0 bits (201), Expect = 4e-17 Identities = 38/86 (44%), Positives = 59/86 (68%) Frame = +2 Query: 2 FGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQGVVQDQGTTNFPVN 181 F W+ G+ IT R++T +++L + G L EV+ASSL+KVD+ G V D G+TNF VN Sbjct: 371 FRWSQ-GIYNHITVRVSTDPDEILINAFGQLYSEVSASSLIKVDLDGTVIDGGSTNFGVN 429 Query: 182 VEGFSVHASVHAARPDLRCVVHVRGP 259 G+ +H+++H RP+++CVVH+ P Sbjct: 430 QAGYVLHSAIHNGRPEVKCVVHLHHP 455 Score = 60.9 bits (141), Expect = 7e-10 Identities = 31/72 (43%), Positives = 46/72 (63%) Frame = +1 Query: 256 PSALAVSATRRGVLPLCQEAALLGEVAYHTLPYGVLDNAERDKLVRALGPHAKVVVLSGA 435 PS +AVSA + G+LP+ QE+ ++G+V YH ++D AER LVR LG V++L Sbjct: 455 PSVVAVSAQKCGLLPISQESMIVGDVGYHEYRGILIDEAERALLVRDLGDR-NVMILRNH 513 Query: 436 GALCCGATLEEA 471 G + CG ++E A Sbjct: 514 GFVVCGESIEHA 525 >AF166171-1|AAD49860.1| 611|Caenorhabditis elegans adducin-head-domain-related protein protein. Length = 611 Score = 85.0 bits (201), Expect = 4e-17 Identities = 38/86 (44%), Positives = 59/86 (68%) Frame = +2 Query: 2 FGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQGVVQDQGTTNFPVN 181 F W+ G+ IT R++T +++L + G L EV+ASSL+KVD+ G V D G+TNF VN Sbjct: 371 FRWSQ-GIYNHITVRVSTDPDEILINAFGQLYSEVSASSLIKVDLDGTVIDGGSTNFGVN 429 Query: 182 VEGFSVHASVHAARPDLRCVVHVRGP 259 G+ +H+++H RP+++CVVH+ P Sbjct: 430 QAGYVLHSAIHNGRPEVKCVVHLHHP 455 Score = 60.9 bits (141), Expect = 7e-10 Identities = 31/72 (43%), Positives = 46/72 (63%) Frame = +1 Query: 256 PSALAVSATRRGVLPLCQEAALLGEVAYHTLPYGVLDNAERDKLVRALGPHAKVVVLSGA 435 PS +AVSA + G+LP+ QE+ ++G+V YH ++D AER LVR LG V++L Sbjct: 455 PSVVAVSAQKCGLLPISQESMIVGDVGYHEYRGILIDEAERALLVRDLGDR-NVMILRNH 513 Query: 436 GALCCGATLEEA 471 G + CG ++E A Sbjct: 514 GFVVCGESIEHA 525 >AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-related protein protein. Length = 679 Score = 70.1 bits (164), Expect = 1e-12 Identities = 31/83 (37%), Positives = 52/83 (62%) Frame = +2 Query: 2 FGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQGVVQDQGTTNFPVN 181 F W+ G+ +I+ R N + L +P GLL HE+TA+++VK+D G + D GT VN Sbjct: 137 FQWSQ-GIHNEISYRTNDEDNTFLMNPFGLLYHEITAATIVKIDENGKILDCGTLKAGVN 195 Query: 182 VEGFSVHASVHAARPDLRCVVHV 250 F +H++++ A P +RC++H+ Sbjct: 196 QPAFLLHSAIYKAHPMVRCILHM 218 Score = 45.6 bits (103), Expect = 3e-05 Identities = 26/68 (38%), Positives = 39/68 (57%) Frame = +1 Query: 268 AVSATRRGVLPLCQEAALLGEVAYHTLPYGVLDNAERDKLVRALGPHAKVVVLSGAGALC 447 AV++ + G+LPLC+EA +LG V YH D+ + D+++ LG V+ L G L Sbjct: 225 AVASMKCGLLPLCKEAMVLGPVGYHDYQDIGDDDIQFDEIIANLG-DKNVLFLRNQGFLV 283 Query: 448 CGATLEEA 471 G T+E A Sbjct: 284 VGDTIEHA 291 >AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-related protein protein. Length = 732 Score = 70.1 bits (164), Expect = 1e-12 Identities = 31/83 (37%), Positives = 52/83 (62%) Frame = +2 Query: 2 FGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQGVVQDQGTTNFPVN 181 F W+ G+ +I+ R N + L +P GLL HE+TA+++VK+D G + D GT VN Sbjct: 137 FQWSQ-GIHNEISYRTNDEDNTFLMNPFGLLYHEITAATIVKIDENGKILDCGTLKAGVN 195 Query: 182 VEGFSVHASVHAARPDLRCVVHV 250 F +H++++ A P +RC++H+ Sbjct: 196 QPAFLLHSAIYKAHPMVRCILHM 218 Score = 45.6 bits (103), Expect = 3e-05 Identities = 26/68 (38%), Positives = 39/68 (57%) Frame = +1 Query: 268 AVSATRRGVLPLCQEAALLGEVAYHTLPYGVLDNAERDKLVRALGPHAKVVVLSGAGALC 447 AV++ + G+LPLC+EA +LG V YH D+ + D+++ LG V+ L G L Sbjct: 225 AVASMKCGLLPLCKEAMVLGPVGYHDYQDIGDDDIQFDEIIANLG-DKNVLFLRNQGFLV 283 Query: 448 CGATLEEA 471 G T+E A Sbjct: 284 VGDTIEHA 291 >AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin protein 1, isoform e protein. Length = 718 Score = 70.1 bits (164), Expect = 1e-12 Identities = 31/83 (37%), Positives = 52/83 (62%) Frame = +2 Query: 2 FGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQGVVQDQGTTNFPVN 181 F W+ G+ +I+ R N + L +P GLL HE+TA+++VK+D G + D GT VN Sbjct: 137 FQWSQ-GIHNEISYRTNDEDNTFLMNPFGLLYHEITAATIVKIDENGKILDCGTLKAGVN 195 Query: 182 VEGFSVHASVHAARPDLRCVVHV 250 F +H++++ A P +RC++H+ Sbjct: 196 QPAFLLHSAIYKAHPMVRCILHM 218 Score = 45.6 bits (103), Expect = 3e-05 Identities = 26/68 (38%), Positives = 39/68 (57%) Frame = +1 Query: 268 AVSATRRGVLPLCQEAALLGEVAYHTLPYGVLDNAERDKLVRALGPHAKVVVLSGAGALC 447 AV++ + G+LPLC+EA +LG V YH D+ + D+++ LG V+ L G L Sbjct: 225 AVASMKCGLLPLCKEAMVLGPVGYHDYQDIGDDDIQFDEIIANLG-DKNVLFLRNQGFLV 283 Query: 448 CGATLEEA 471 G T+E A Sbjct: 284 VGDTIEHA 291 >AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin protein 1, isoform b protein. Length = 732 Score = 70.1 bits (164), Expect = 1e-12 Identities = 31/83 (37%), Positives = 52/83 (62%) Frame = +2 Query: 2 FGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQGVVQDQGTTNFPVN 181 F W+ G+ +I+ R N + L +P GLL HE+TA+++VK+D G + D GT VN Sbjct: 137 FQWSQ-GIHNEISYRTNDEDNTFLMNPFGLLYHEITAATIVKIDENGKILDCGTLKAGVN 195 Query: 182 VEGFSVHASVHAARPDLRCVVHV 250 F +H++++ A P +RC++H+ Sbjct: 196 QPAFLLHSAIYKAHPMVRCILHM 218 Score = 45.6 bits (103), Expect = 3e-05 Identities = 26/68 (38%), Positives = 39/68 (57%) Frame = +1 Query: 268 AVSATRRGVLPLCQEAALLGEVAYHTLPYGVLDNAERDKLVRALGPHAKVVVLSGAGALC 447 AV++ + G+LPLC+EA +LG V YH D+ + D+++ LG V+ L G L Sbjct: 225 AVASMKCGLLPLCKEAMVLGPVGYHDYQDIGDDDIQFDEIIANLG-DKNVLFLRNQGFLV 283 Query: 448 CGATLEEA 471 G T+E A Sbjct: 284 VGDTIEHA 291 >AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin protein 1, isoform c protein. Length = 702 Score = 70.1 bits (164), Expect = 1e-12 Identities = 31/83 (37%), Positives = 52/83 (62%) Frame = +2 Query: 2 FGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQGVVQDQGTTNFPVN 181 F W+ G+ +I+ R N + L +P GLL HE+TA+++VK+D G + D GT VN Sbjct: 137 FQWSQ-GIHNEISYRTNDEDNTFLMNPFGLLYHEITAATIVKIDENGKILDCGTLKAGVN 195 Query: 182 VEGFSVHASVHAARPDLRCVVHV 250 F +H++++ A P +RC++H+ Sbjct: 196 QPAFLLHSAIYKAHPMVRCILHM 218 Score = 45.6 bits (103), Expect = 3e-05 Identities = 26/68 (38%), Positives = 39/68 (57%) Frame = +1 Query: 268 AVSATRRGVLPLCQEAALLGEVAYHTLPYGVLDNAERDKLVRALGPHAKVVVLSGAGALC 447 AV++ + G+LPLC+EA +LG V YH D+ + D+++ LG V+ L G L Sbjct: 225 AVASMKCGLLPLCKEAMVLGPVGYHDYQDIGDDDIQFDEIIANLG-DKNVLFLRNQGFLV 283 Query: 448 CGATLEEA 471 G T+E A Sbjct: 284 VGDTIEHA 291 >AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin protein 1, isoform d protein. Length = 682 Score = 70.1 bits (164), Expect = 1e-12 Identities = 31/83 (37%), Positives = 52/83 (62%) Frame = +2 Query: 2 FGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQGVVQDQGTTNFPVN 181 F W+ G+ +I+ R N + L +P GLL HE+TA+++VK+D G + D GT VN Sbjct: 137 FQWSQ-GIHNEISYRTNDEDNTFLMNPFGLLYHEITAATIVKIDENGKILDCGTLKAGVN 195 Query: 182 VEGFSVHASVHAARPDLRCVVHV 250 F +H++++ A P +RC++H+ Sbjct: 196 QPAFLLHSAIYKAHPMVRCILHM 218 Score = 45.6 bits (103), Expect = 3e-05 Identities = 26/68 (38%), Positives = 39/68 (57%) Frame = +1 Query: 268 AVSATRRGVLPLCQEAALLGEVAYHTLPYGVLDNAERDKLVRALGPHAKVVVLSGAGALC 447 AV++ + G+LPLC+EA +LG V YH D+ + D+++ LG V+ L G L Sbjct: 225 AVASMKCGLLPLCKEAMVLGPVGYHDYQDIGDDDIQFDEIIANLG-DKNVLFLRNQGFLV 283 Query: 448 CGATLEEA 471 G T+E A Sbjct: 284 VGDTIEHA 291 >AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin protein 1, isoform a protein. Length = 679 Score = 70.1 bits (164), Expect = 1e-12 Identities = 31/83 (37%), Positives = 52/83 (62%) Frame = +2 Query: 2 FGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQGVVQDQGTTNFPVN 181 F W+ G+ +I+ R N + L +P GLL HE+TA+++VK+D G + D GT VN Sbjct: 137 FQWSQ-GIHNEISYRTNDEDNTFLMNPFGLLYHEITAATIVKIDENGKILDCGTLKAGVN 195 Query: 182 VEGFSVHASVHAARPDLRCVVHV 250 F +H++++ A P +RC++H+ Sbjct: 196 QPAFLLHSAIYKAHPMVRCILHM 218 Score = 45.6 bits (103), Expect = 3e-05 Identities = 26/68 (38%), Positives = 39/68 (57%) Frame = +1 Query: 268 AVSATRRGVLPLCQEAALLGEVAYHTLPYGVLDNAERDKLVRALGPHAKVVVLSGAGALC 447 AV++ + G+LPLC+EA +LG V YH D+ + D+++ LG V+ L G L Sbjct: 225 AVASMKCGLLPLCKEAMVLGPVGYHDYQDIGDDDIQFDEIIANLG-DKNVLFLRNQGFLV 283 Query: 448 CGATLEEA 471 G T+E A Sbjct: 284 VGDTIEHA 291 >Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein C03D6.4 protein. Length = 1390 Score = 29.5 bits (63), Expect = 2.1 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 1/84 (1%) Frame = -1 Query: 261 GGPRTCTTQRRS-GRAACTDACTEKPSTLTGKLVVPWSWTTPCMSTLTRDEAVTSWGSRP 85 GG + ++ S G+A C A T P+T T V +S+ T S + S+G+ Sbjct: 1113 GGSKAASSPFGSFGQAGCQPAKTSNPATSTAS--VTFSFNTGATSASAKPAGFGSFGA-- 1168 Query: 84 RGDVSTCSSAVFRRAVICPVTPVV 13 S S+VF +V P P V Sbjct: 1169 --GASAKPSSVFGGSVTAPTVPNV 1190 >Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical protein C29E6.1a protein. Length = 812 Score = 28.7 bits (61), Expect = 3.6 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -1 Query: 255 PRTCTTQRRSGRAACTDACTEKPSTLTGKLVVPWSWTTPCMSTLTRDEAVTS 100 P+ TT+ + ++ T T+KP+T+T +P TT +T T TS Sbjct: 521 PKPTTTETATTSSSTTTVTTQKPTTVTSTTTLP--STTASTTTKTTTSTPTS 570 >Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical protein C29E6.1b protein. Length = 653 Score = 28.7 bits (61), Expect = 3.6 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -1 Query: 255 PRTCTTQRRSGRAACTDACTEKPSTLTGKLVVPWSWTTPCMSTLTRDEAVTS 100 P+ TT+ + ++ T T+KP+T+T +P TT +T T TS Sbjct: 362 PKPTTTETATTSSSTTTVTTQKPTTVTSTTTLP--STTASTTTKTTTSTPTS 411 >X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. Length = 693 Score = 28.7 bits (61), Expect = 3.6 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -1 Query: 255 PRTCTTQRRSGRAACTDACTEKPSTLTGKLVVPWSWTTPCMSTLTRDEAVTS 100 P+ TT+ + ++ T T+KP+T+T +P TT +T T TS Sbjct: 402 PKPTTTETATTSSSTTTVTTQKPTTVTSTTTLP--STTASTTTKTTTSTPTS 451 >Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical protein ZK678.1 protein. Length = 719 Score = 27.9 bits (59), Expect = 6.3 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +2 Query: 23 VTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQGVVQDQG 160 V G + R NT ++ + T+PR + S +M+G+ Q G Sbjct: 544 VQGNVVLRTNTLKDALTTAPRAQNQPSTSTDSSSSSEMEGIRQSFG 589 >Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein. Length = 722 Score = 27.9 bits (59), Expect = 6.3 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +2 Query: 23 VTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQGVVQDQG 160 V G + R NT ++ + T+PR + S +M+G+ Q G Sbjct: 544 VQGNVVLRTNTLKDALTTAPRAQNQPSTSTDSSSSSEMEGIRQSFG 589 >U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein protein. Length = 719 Score = 27.9 bits (59), Expect = 6.3 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +2 Query: 23 VTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQGVVQDQG 160 V G + R NT ++ + T+PR + S +M+G+ Q G Sbjct: 544 VQGNVVLRTNTLKDALTTAPRAQNQPSTSTDSSSSSEMEGIRQSFG 589 >U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein protein. Length = 719 Score = 27.9 bits (59), Expect = 6.3 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +2 Query: 23 VTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQGVVQDQG 160 V G + R NT ++ + T+PR + S +M+G+ Q G Sbjct: 544 VQGNVVLRTNTLKDALTTAPRAQNQPSTSTDSSSSSEMEGIRQSFG 589 >U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical protein K09E2.1 protein. Length = 915 Score = 27.5 bits (58), Expect = 8.4 Identities = 18/61 (29%), Positives = 24/61 (39%) Frame = +2 Query: 365 TTPSATSWSARWARTPRSXXXXXXXXXXXXXXXRKPSCTRVCSPPPPTATEVSSHAVG*P 544 TTPS+T++ A P+ T +C PP T T+ SS A P Sbjct: 393 TTPSSTTFKAPPESEITEITVSNEINEASTTSSPTPAATTICISPP-TTTQTSSSASSSP 451 Query: 545 H 547 H Sbjct: 452 H 452 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,853,581 Number of Sequences: 27780 Number of extensions: 223905 Number of successful extensions: 904 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 830 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 904 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1385109898 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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