Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0566
         (630 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    25   0.80 
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   5.7  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   7.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.9  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 420 HDLGVRAQRADQLVALGVVQHAVG*SVVRDLAEE 319
           +DL     R+  + A+ VVQ  V  +V+RDL  E
Sbjct: 478 NDLATEHDRSVMIQAIRVVQKLVNTTVMRDLGVE 511


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = -1

Query: 99  WGSRPRGDVSTCSSA-VFRRAVICPV 25
           W SRPR    T S A + R+ V+  V
Sbjct: 45  WWSRPREPAQTTSKAGIHRKKVLLSV 70


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -2

Query: 500 AAVSRRACRKASSSVAPQHSAPAPLSTT 417
           +++S  A   A+ + A QH++P+P  ++
Sbjct: 41  SSLSAAAVAAAAVNYAQQHNSPSPTGSS 68


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 203  ASVHAARPDLRCVVHVRGPPLSPCPP 280
            A++   RPDLR  +    PP    PP
Sbjct: 1630 ATLDKRRPDLRDELGYIAPPNRKLPP 1655


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -1

Query: 246 CTTQRRSGRAACTDACT 196
           C+T + +G   C + CT
Sbjct: 153 CSTYQSNGEEVCLENCT 169


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,469
Number of Sequences: 438
Number of extensions: 2567
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)