Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0564
         (585 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    24   3.2  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    23   9.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   9.6  

>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 356 ANKQNDSIWFFFHCLAFHSLWSP 424
           A  + DS W    CL +  LW P
Sbjct: 12  AYDRRDSFWLQLLCLKYLGLWPP 34


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 8/17 (47%), Positives = 15/17 (88%)
 Frame = +3

Query: 213 IRRLLDHLEDFLALRNA 263
           I+++LD L+D +AL++A
Sbjct: 330 IQKILDSLDDIIALQDA 346


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +3

Query: 456 LELRVLRSQYSYNGCPTFKPKRITVS 533
           LE+  + + +++ GC + +P RI V+
Sbjct: 150 LEVLNIGTSHTFRGCGSARPSRIDVA 175


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,833
Number of Sequences: 2352
Number of extensions: 8918
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)