Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0563
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   1.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   1.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.2  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   5.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.6  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 194 KSFLLMSDTIGLSETKFVASKFIFVIL 114
           K  L +   +GL+  KF   KF  VIL
Sbjct: 82  KFLLKLGQLLGLAPVKFYVQKFYVVIL 108


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 194 KSFLLMSDTIGLSETKFVASKFIFVIL 114
           K  L +   +GL+  KF   KF  VIL
Sbjct: 8   KFLLKLGQLLGLAPVKFYVQKFYVVIL 34


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +2

Query: 434 IPGRELNCQRCNDCERTY 487
           +PG  +N Q C  C   Y
Sbjct: 505 VPGETINLQTCVRCPNNY 522


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = -1

Query: 382 SMLTSHRTQDLWRNATTGSLRNI 314
           S++ +   +D+W++AT+G   N+
Sbjct: 109 SVVAAAAVKDVWQSATSGGGANL 131


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 90  NQNARILYQNYENKFGS 140
           N  +R+ Y+N   +FGS
Sbjct: 64  NSKSRVFYENVNFQFGS 80


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = +1

Query: 337 WHSATNPGFYGWLTC 381
           WH+   P    WL C
Sbjct: 338 WHTGERPFVCNWLFC 352


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,520
Number of Sequences: 336
Number of extensions: 3817
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)