Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0563
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   4.0  
AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding pr...    23   9.2  
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    23   9.2  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 119 LRK*IWKLQIWF-QTIRWYQT*AGRISQ*LRSRKRKPI 229
           LR  IWK +    QT+  Y+    R  Q LRS   KPI
Sbjct: 468 LRNDIWKKETAVTQTLSGYKEELARADQALRSMAGKPI 505


>AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding
           protein AgamOBP32 protein.
          Length = 320

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = -1

Query: 406 QQIVSTWNSMLTSHRTQDLW 347
           ++++ TW  +      QDLW
Sbjct: 296 EKVLQTWKDLYDRENLQDLW 315


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 47  DSSSCCCPNSDLRF*PKRSYTLPKLR 124
           D +S   PNS  R   KR   LPKL+
Sbjct: 193 DCNSLENPNSQFRVMGKRMINLPKLK 218


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,650
Number of Sequences: 2352
Number of extensions: 15233
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)