Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0561
(655 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 149 2e-36
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 149 2e-36
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 147 5e-36
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 147 5e-36
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 147 5e-36
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 147 6e-36
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 147 6e-36
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 89 2e-18
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 89 2e-18
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 89 2e-18
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 89 2e-18
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 87 7e-18
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 87 1e-17
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 87 1e-17
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 87 1e-17
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 87 1e-17
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 66 1e-11
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 66 2e-11
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 32 0.29
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 29 2.0
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.0
At4g14990.1 68417.m02303 expressed protein 29 2.7
At1g67810.1 68414.m07740 Fe-S metabolism associated domain-conta... 29 3.6
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 28 6.2
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 28 6.2
At3g48400.1 68416.m05283 DC1 domain-containing protein similar t... 28 6.2
At3g13330.1 68416.m01678 expressed protein 28 6.2
At5g45840.1 68418.m05639 leucine-rich repeat transmembrane prote... 27 8.2
At1g07260.1 68414.m00772 UDP-glucoronosyl/UDP-glucosyl transfera... 27 8.2
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 149 bits (361), Expect = 2e-36
Identities = 67/82 (81%), Positives = 76/82 (92%)
Frame = +1
Query: 262 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTE 441
LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TE
Sbjct: 195 LEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITE 254
Query: 442 FQTNLVPYPRIHFPLVTYAPVI 507
FQTNLVPYPRIHF L +YAPVI
Sbjct: 255 FQTNLVPYPRIHFMLSSYAPVI 276
Score = 128 bits (309), Expect = 3e-30
Identities = 60/84 (71%), Positives = 68/84 (80%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
YT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 182 EFAIYPAPQVSTAVVEPYNSILTT 253
F IYP+PQVSTAVVEPYNS+L+T
Sbjct: 168 GFTIYPSPQVSTAVVEPYNSVLST 191
Score = 95.5 bits (227), Expect = 3e-20
Identities = 40/48 (83%), Positives = 43/48 (89%)
Frame = +3
Query: 510 AEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 653
A KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVP
Sbjct: 278 AAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVP 325
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 149 bits (361), Expect = 2e-36
Identities = 67/82 (81%), Positives = 76/82 (92%)
Frame = +1
Query: 262 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTE 441
LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TE
Sbjct: 195 LEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITE 254
Query: 442 FQTNLVPYPRIHFPLVTYAPVI 507
FQTNLVPYPRIHF L +YAPVI
Sbjct: 255 FQTNLVPYPRIHFMLSSYAPVI 276
Score = 128 bits (309), Expect = 3e-30
Identities = 60/84 (71%), Positives = 68/84 (80%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
YT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 182 EFAIYPAPQVSTAVVEPYNSILTT 253
F IYP+PQVSTAVVEPYNS+L+T
Sbjct: 168 GFTIYPSPQVSTAVVEPYNSVLST 191
Score = 95.5 bits (227), Expect = 3e-20
Identities = 40/48 (83%), Positives = 43/48 (89%)
Frame = +3
Query: 510 AEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 653
A KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVP
Sbjct: 278 AAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVP 325
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 147 bits (357), Expect = 5e-36
Identities = 65/82 (79%), Positives = 77/82 (93%)
Frame = +1
Query: 262 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTE 441
LEH+D + ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TE
Sbjct: 195 LEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTE 254
Query: 442 FQTNLVPYPRIHFPLVTYAPVI 507
FQTNLVPYPRIHF L +YAPVI
Sbjct: 255 FQTNLVPYPRIHFMLSSYAPVI 276
Score = 127 bits (307), Expect = 6e-30
Identities = 60/84 (71%), Positives = 68/84 (80%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
YTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL
Sbjct: 108 YTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 182 EFAIYPAPQVSTAVVEPYNSILTT 253
F +YP+PQVST+VVEPYNS+L+T
Sbjct: 168 GFTVYPSPQVSTSVVEPYNSVLST 191
Score = 97.5 bits (232), Expect = 7e-21
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +3
Query: 510 AEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 653
AEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVP
Sbjct: 278 AEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVP 325
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 147 bits (357), Expect = 5e-36
Identities = 65/82 (79%), Positives = 77/82 (93%)
Frame = +1
Query: 262 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTE 441
LEH+D + ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TE
Sbjct: 195 LEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTE 254
Query: 442 FQTNLVPYPRIHFPLVTYAPVI 507
FQTNLVPYPRIHF L +YAPVI
Sbjct: 255 FQTNLVPYPRIHFMLSSYAPVI 276
Score = 127 bits (307), Expect = 6e-30
Identities = 60/84 (71%), Positives = 68/84 (80%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
YTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL
Sbjct: 108 YTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 182 EFAIYPAPQVSTAVVEPYNSILTT 253
F +YP+PQVST+VVEPYNS+L+T
Sbjct: 168 GFTVYPSPQVSTSVVEPYNSVLST 191
Score = 97.5 bits (232), Expect = 7e-21
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +3
Query: 510 AEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 653
AEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVP
Sbjct: 278 AEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVP 325
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 147 bits (357), Expect = 5e-36
Identities = 68/104 (65%), Positives = 79/104 (75%)
Frame = +1
Query: 262 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTE 441
LEH+D ++DNEAIYDICRR+LDIERPTY+NLNRLI Q +SS+T SLRFDGA+NVD+TE
Sbjct: 195 LEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITE 254
Query: 442 FQTNLVPYPRIHFPLVTYAPVILPRRPTMNSFPSPRSQTHASSP 573
FQTNLVPYPRIHF L +YAPVI + F P T P
Sbjct: 255 FQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEP 298
Score = 121 bits (292), Expect = 4e-28
Identities = 56/84 (66%), Positives = 67/84 (79%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
YT+G+EIVD L+R+RKLAD CTGLQGFL+F+ LL+ERLSVD+GKKSKL
Sbjct: 108 YTVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKL 167
Query: 182 EFAIYPAPQVSTAVVEPYNSILTT 253
F IYP+PQVSTAVVEPYNS+L+T
Sbjct: 168 GFTIYPSPQVSTAVVEPYNSVLST 191
Score = 89.8 bits (213), Expect = 1e-18
Identities = 36/46 (78%), Positives = 40/46 (86%)
Frame = +3
Query: 516 KAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 653
KAYHEQ SV EIT + FEP+N M KCDPRHGKYMACC++YRGDVVP
Sbjct: 280 KAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVP 325
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 147 bits (356), Expect = 6e-36
Identities = 65/82 (79%), Positives = 76/82 (92%)
Frame = +1
Query: 262 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTE 441
LEH+D + ++DNEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TE
Sbjct: 195 LEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTE 254
Query: 442 FQTNLVPYPRIHFPLVTYAPVI 507
FQTNLVPYPRIHF L +YAPVI
Sbjct: 255 FQTNLVPYPRIHFMLSSYAPVI 276
Score = 127 bits (307), Expect = 6e-30
Identities = 60/84 (71%), Positives = 68/84 (80%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
YTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL
Sbjct: 108 YTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 182 EFAIYPAPQVSTAVVEPYNSILTT 253
F +YP+PQVST+VVEPYNS+L+T
Sbjct: 168 GFTVYPSPQVSTSVVEPYNSVLST 191
Score = 97.5 bits (232), Expect = 7e-21
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +3
Query: 510 AEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 653
AEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVP
Sbjct: 278 AEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVP 325
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 147 bits (356), Expect = 6e-36
Identities = 65/82 (79%), Positives = 76/82 (92%)
Frame = +1
Query: 262 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTE 441
LEH+D + ++DNEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TE
Sbjct: 195 LEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTE 254
Query: 442 FQTNLVPYPRIHFPLVTYAPVI 507
FQTNLVPYPRIHF L +YAPVI
Sbjct: 255 FQTNLVPYPRIHFMLSSYAPVI 276
Score = 127 bits (307), Expect = 6e-30
Identities = 60/84 (71%), Positives = 68/84 (80%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
YTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL
Sbjct: 108 YTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 182 EFAIYPAPQVSTAVVEPYNSILTT 253
F +YP+PQVST+VVEPYNS+L+T
Sbjct: 168 GFTVYPSPQVSTSVVEPYNSVLST 191
Score = 97.5 bits (232), Expect = 7e-21
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +3
Query: 510 AEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 653
AEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVP
Sbjct: 278 AEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVP 325
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/81 (46%), Positives = 57/81 (70%)
Frame = +1
Query: 262 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTE 441
+E++D ++DNEA+YDIC R L + P++ +LN LI +S +T SLRF G LN DL +
Sbjct: 194 VENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRK 253
Query: 442 FQTNLVPYPRIHFPLVTYAPV 504
NL+P+PR+HF +V +AP+
Sbjct: 254 LAVNLIPFPRLHFFMVGFAPL 274
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/86 (39%), Positives = 51/86 (59%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
YT G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 107 YTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 166
Query: 182 EFAIYPAPQVSTAVVEPYNSILTTPQ 259
F+++P+P+VS VVEPYN+ L+ Q
Sbjct: 167 TFSVFPSPKVSDTVVEPYNATLSVHQ 192
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 534 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 641
L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 285 LTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRG 320
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/81 (46%), Positives = 57/81 (70%)
Frame = +1
Query: 262 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTE 441
+E++D ++DNEA+YDIC R L + P++ +LN LI +S +T SLRF G LN DL +
Sbjct: 194 VENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRK 253
Query: 442 FQTNLVPYPRIHFPLVTYAPV 504
NL+P+PR+HF +V +AP+
Sbjct: 254 LAVNLIPFPRLHFFMVGFAPL 274
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/86 (39%), Positives = 51/86 (59%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
YT G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 107 YTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 166
Query: 182 EFAIYPAPQVSTAVVEPYNSILTTPQ 259
F+++P+P+VS VVEPYN+ L+ Q
Sbjct: 167 TFSVFPSPKVSDTVVEPYNATLSVHQ 192
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 534 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDV 647
L+V E+T ++ N M DPRHG+Y+ ++RG +
Sbjct: 285 LTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQM 322
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 89.0 bits (211), Expect = 2e-18
Identities = 38/81 (46%), Positives = 56/81 (69%)
Frame = +1
Query: 262 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTE 441
+E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T LRF G LN DL +
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252
Query: 442 FQTNLVPYPRIHFPLVTYAPV 504
NL+P+PR+HF +V +AP+
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPL 273
Score = 68.5 bits (160), Expect = 4e-12
Identities = 32/86 (37%), Positives = 50/86 (58%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
YT G E++D VLD +RK A+ LQGF + H LL+ ++ +Y + +
Sbjct: 106 YTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMM 165
Query: 182 EFAIYPAPQVSTAVVEPYNSILTTPQ 259
F+++P+P+VS VVEPYN+ L+ Q
Sbjct: 166 TFSVFPSPKVSDTVVEPYNATLSVHQ 191
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 525 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 641
+ LSV E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 281 YSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRG 319
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 89.0 bits (211), Expect = 2e-18
Identities = 38/81 (46%), Positives = 56/81 (69%)
Frame = +1
Query: 262 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTE 441
+E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T LRF G LN DL +
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252
Query: 442 FQTNLVPYPRIHFPLVTYAPV 504
NL+P+PR+HF +V +AP+
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPL 273
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/86 (38%), Positives = 51/86 (59%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
YT G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + +
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMM 165
Query: 182 EFAIYPAPQVSTAVVEPYNSILTTPQ 259
F+++P+P+VS VVEPYN+ L+ Q
Sbjct: 166 TFSVFPSPKVSDTVVEPYNATLSVHQ 191
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 525 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 641
+ LSV E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 281 YSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRG 319
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 87.4 bits (207), Expect = 7e-18
Identities = 37/81 (45%), Positives = 56/81 (69%)
Frame = +1
Query: 262 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTE 441
+E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL +
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252
Query: 442 FQTNLVPYPRIHFPLVTYAPV 504
NL+P+PR+HF +V +AP+
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPL 273
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/86 (38%), Positives = 51/86 (59%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
YT G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + +
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMM 165
Query: 182 EFAIYPAPQVSTAVVEPYNSILTTPQ 259
F+++P+P+VS VVEPYN+ L+ Q
Sbjct: 166 TFSVFPSPKVSDTVVEPYNATLSVHQ 191
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 525 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 641
+ L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 281 YRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRG 319
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 87.0 bits (206), Expect = 1e-17
Identities = 37/81 (45%), Positives = 56/81 (69%)
Frame = +1
Query: 262 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTE 441
+E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL +
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252
Query: 442 FQTNLVPYPRIHFPLVTYAPV 504
NL+P+PR+HF +V +AP+
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPL 273
Score = 73.3 bits (172), Expect = 1e-13
Identities = 34/86 (39%), Positives = 51/86 (59%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
YT G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 165
Query: 182 EFAIYPAPQVSTAVVEPYNSILTTPQ 259
F+++P+P+VS VVEPYN+ L+ Q
Sbjct: 166 TFSVFPSPKVSDTVVEPYNATLSVHQ 191
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 525 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 641
+ L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 281 YRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRG 319
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 87.0 bits (206), Expect = 1e-17
Identities = 37/81 (45%), Positives = 56/81 (69%)
Frame = +1
Query: 262 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTE 441
+E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL +
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252
Query: 442 FQTNLVPYPRIHFPLVTYAPV 504
NL+P+PR+HF +V +AP+
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPL 273
Score = 73.3 bits (172), Expect = 1e-13
Identities = 34/86 (39%), Positives = 51/86 (59%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
YT G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 165
Query: 182 EFAIYPAPQVSTAVVEPYNSILTTPQ 259
F+++P+P+VS VVEPYN+ L+ Q
Sbjct: 166 TFSVFPSPKVSDTVVEPYNATLSVHQ 191
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 525 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 641
+ L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 281 YRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRG 319
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 87.0 bits (206), Expect = 1e-17
Identities = 37/81 (45%), Positives = 56/81 (69%)
Frame = +1
Query: 262 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTE 441
+E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL +
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252
Query: 442 FQTNLVPYPRIHFPLVTYAPV 504
NL+P+PR+HF +V +AP+
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPL 273
Score = 73.3 bits (172), Expect = 1e-13
Identities = 34/86 (39%), Positives = 51/86 (59%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
YT G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 165
Query: 182 EFAIYPAPQVSTAVVEPYNSILTTPQ 259
F+++P+P+VS VVEPYN+ L+ Q
Sbjct: 166 TFSVFPSPKVSDTVVEPYNATLSVHQ 191
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 525 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 641
+ L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 281 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRG 319
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 87.0 bits (206), Expect = 1e-17
Identities = 37/81 (45%), Positives = 56/81 (69%)
Frame = +1
Query: 262 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTE 441
+E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL +
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252
Query: 442 FQTNLVPYPRIHFPLVTYAPV 504
NL+P+PR+HF +V +AP+
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPL 273
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/86 (39%), Positives = 51/86 (59%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
YT G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 106 YTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 165
Query: 182 EFAIYPAPQVSTAVVEPYNSILTTPQ 259
F+++P+P+VS VVEPYN+ L+ Q
Sbjct: 166 TFSVFPSPKVSDTVVEPYNATLSVHQ 191
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 525 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 641
+ L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 281 YRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRG 319
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 66.5 bits (155), Expect = 1e-11
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = +1
Query: 268 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 447
++DC ++DN A+ I L + PT+ N L+ ++S+ T +LR+ G +N DL
Sbjct: 198 NADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLL 257
Query: 448 TNLVPYPRIHFPLVTYAPVILPRR 519
+L+P PR HF + Y P+ + R+
Sbjct: 258 ASLIPTPRCHFLMTGYTPLTVERQ 281
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
Y GK + + ++D I + AD L+GF++ H L+E L+ Y KK
Sbjct: 108 YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQ 167
Query: 182 EFAIYP-APQVSTAVVEPYNSILT 250
++++P + S VV+PYNS+LT
Sbjct: 168 TYSVFPNQMETSDVVVQPYNSLLT 191
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = +1
Query: 268 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 447
++DC ++DN A+ I L + PT+ N L+ ++S+ T +LR+ G +N DL
Sbjct: 198 NADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLL 257
Query: 448 TNLVPYPRIHFPLVTYAPVILPRR 519
+L+P PR HF + Y P+ + R+
Sbjct: 258 ASLIPTPRCHFLMTGYTPLTVERQ 281
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 YTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 181
Y GK + + ++D I + AD L+GF++ H L+E L+ Y KK
Sbjct: 108 YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQ 167
Query: 182 EFAIYP-APQVSTAVVEPYNSILT 250
++++P + S VV+PYNS+LT
Sbjct: 168 TYSVFPNQMETSDVVVQPYNSLLT 191
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 387 LDHCFFEIRRRSECGPHRVPD*LGALPPYPLPTGHVRASHLAEKAY 524
L C RRR GP RV + L PP P+ + V + LA + +
Sbjct: 97 LQRCIIARRRRDRVGPVRVENTLPPYPPPPMTSAAVTTTTLAREGF 142
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = -3
Query: 611 LAMTGVAFHHLVGGLEACVCDLGDGKLFMVGLLGKMTGAYVTSGKWIRG*GTKLVWNSVR 432
+A F H+ GGL A + D + + G+ G Y T G K++W+ V
Sbjct: 271 VAAINTTFDHIGGGLRAILTDQNKLIVAVGGVTALAAGIYTTRE------GAKVIWSYVD 324
Query: 431 STFRAPSNLKEA 396
PS ++E+
Sbjct: 325 RILGQPSLIRES 336
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 118 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 20
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At4g14990.1 68417.m02303 expressed protein
Length = 787
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 442 FQTNLVPYPRIHFPLVTYAPVILPRRPTMNSFPSPRSQTHASSP 573
++T+ P + + P+I+P T SFPSP ++ SSP
Sbjct: 155 YRTSSYPQQQTQLQHYSSEPIIVPES-TFTSFPSPGKRSQQSSP 197
>At1g67810.1 68414.m07740 Fe-S metabolism associated
domain-containing protein contains Pfam PF02657: Fe-S
metabolism associated domain
Length = 258
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 478 FPLVTYAPVILPRRPTMNSFPSPRSQTHASSPP 576
F + P+I RPT SFP+PR + S P
Sbjct: 7 FKALASPPLISTSRPTTKSFPNPRFTSRFSPKP 39
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = -3
Query: 590 FHHLVGGLEACVCDLGDGKLFMVGLLGKMTGAYVTSGKWIRG*GTKLVWNSVRSTFRAPS 411
F H+ GGL + D + + GL G Y T G K++W+ V PS
Sbjct: 277 FDHIGGGLRTILTDQNKLIVAVGGLTALAAGIYTTRE------GAKVIWSYVDRILGQPS 330
Query: 410 NLKEA 396
++E+
Sbjct: 331 LIRES 335
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 27.9 bits (59), Expect = 6.2
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3
Query: 647 DVTTVQHTASHVLAMTGVAFHHLVGGLE 564
D + + H H L TG+ HH+ G++
Sbjct: 68 DTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At3g48400.1 68416.m05283 DC1 domain-containing protein similar to
UV-B light insensitive ULI3 [Arabidopsis thaliana]
GI:17225050; contains Pfam profile PF03107: DC1 domain
Length = 619
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 241 YPHHPTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYT 354
Y HP +L H + + DN+ DIC D ++ YT
Sbjct: 541 YDEHPLSLCHGEDDVIKDNKYWCDICETETDPKKWFYT 578
>At3g13330.1 68416.m01678 expressed protein
Length = 1711
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -2
Query: 522 RPSRQDDWRVRDQWEVDTGVRHQVSLELGEVHIQSAVESQRSSDRGDNLSD 370
+ S +D+ +W V T Q + EL ++H+QSA++ S + + SD
Sbjct: 682 KASSKDEQVAHSRWHVPTQEETQFANELLDLHLQSALDDLLSICQSNIHSD 732
>At5g45840.1 68418.m05639 leucine-rich repeat transmembrane protein
kinase, putative and genscan+
Length = 668
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +1
Query: 439 EFQTNLVPYPRIHFPLVTYAPV-ILPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMAST 615
E T + P FP +T A I P P + P P + T AS PP ++ +
Sbjct: 251 EIITIVFPRSSGSFPALTNAKKRIPPLIPPSSPPPLPTNNTIASDPPRKFEEKSKGFKDV 310
Query: 616 WLAV 627
WL V
Sbjct: 311 WLYV 314
>At1g07260.1 68414.m00772 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 476
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/60 (21%), Positives = 28/60 (46%)
Frame = +2
Query: 170 KSKLEFAIYPAPQVSTAVVEPYNSILTTPQPLSTLTVLSWSTMKPSMTSAAVISTLSAQP 349
++++ F YP+P +E S++ + T+T+L W+ S +++QP
Sbjct: 4 EAEIIFVTYPSPGHLLVSIEFAKSLIKRDDRIHTITILYWALPLAPQAHLFAKSLVASQP 63
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,544,870
Number of Sequences: 28952
Number of extensions: 345149
Number of successful extensions: 1179
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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