Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0559
(611 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 189 2e-48
SB_56| Best HMM Match : Actin (HMM E-Value=0) 189 2e-48
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 189 2e-48
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 3e-48
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 4e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 4e-29
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 94 7e-20
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 77 1e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 67 1e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 58 7e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 6e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 40 0.002
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.56
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 31 0.97
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 0.97
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.97
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 31 0.97
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 30 1.3
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 30 1.3
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 30 1.3
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 1.7
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 30 1.7
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.7
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 2.2
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 29 3.0
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 3.0
SB_11456| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40) 29 3.0
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 28 6.9
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 6.9
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 28 6.9
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 28 6.9
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 28 6.9
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 6.9
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 27 9.1
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 27 9.1
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 189 bits (460), Expect = 2e-48
Identities = 93/119 (78%), Positives = 95/119 (79%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 435 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLD 611
QIMFETFN+PAMYVAIQAVLSLYAS P + PHAILRLD
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 179
Score = 123 bits (297), Expect = 1e-28
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +1
Query: 79 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 189 bits (460), Expect = 2e-48
Identities = 93/119 (78%), Positives = 95/119 (79%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 435 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLD 611
QIMFETFN+PAMYVAIQAVLSLYAS P + PHAILRLD
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 179
Score = 124 bits (300), Expect = 4e-29
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 79 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 189 bits (460), Expect = 2e-48
Identities = 93/119 (78%), Positives = 95/119 (79%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLD 611
QIMFETFN+PAMYVAIQAVLSLYAS P + PHAILRLD
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Score = 130 bits (315), Expect = 7e-31
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 252
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 188 bits (458), Expect = 3e-48
Identities = 92/119 (77%), Positives = 95/119 (79%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLD 611
QIMFETFN+PAMYVAIQAVLSLYAS P + PHAI+RLD
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Score = 126 bits (304), Expect = 1e-29
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 252
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146
Score = 126 bits (304), Expect = 1e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 252
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/27 (85%), Positives = 25/27 (92%), Gaps = 2/27 (7%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYE--GYA 583
GRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 147 GRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 124 bits (300), Expect = 4e-29
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +1
Query: 79 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTF 344
KRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALP 589
GRTTGIV+DSGDGV+HTVPIYEGYALP
Sbjct: 109 GRTTGIVMDSGDGVTHTVPIYEGYALP 135
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/65 (50%), Positives = 38/65 (58%)
Frame = +3
Query: 417 NREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPHA 596
N + M +IMFETFN+PAMYVAIQAVLSLYAS P + PHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 597 ILRLD 611
I+RLD
Sbjct: 138 IIRLD 142
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 100 bits (239), Expect = 1e-21
Identities = 50/122 (40%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Frame = +3
Query: 249 TEKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 425
++ R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NRE
Sbjct: 62 SQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNRE 121
Query: 426 KMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPHAILR 605
KM ++MFE + +Y+AIQAVL+LYA + CP + PH R
Sbjct: 122 KMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRR 181
Query: 606 LD 611
LD
Sbjct: 182 LD 183
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +1
Query: 91 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQR 255
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA +
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQ 63
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 94.3 bits (224), Expect = 7e-20
Identities = 42/62 (67%), Positives = 52/62 (83%)
Frame = +3
Query: 324 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 503
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 504 AS 509
AS
Sbjct: 2189 AS 2190
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 198
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALP 589
GRTTG V D GDGVSHTVP+Y+GY LP
Sbjct: 2191 GRTTGTVFDCGDGVSHTVPVYDGYWLP 2217
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 76.6 bits (180), Expect = 1e-14
Identities = 37/80 (46%), Positives = 50/80 (62%)
Frame = +3
Query: 372 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVS 551
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 552 PTPCPSTKDTHSPHAILRLD 611
P + PH+I+R D
Sbjct: 186 SHSVPIYEGFAMPHSIMRTD 205
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/76 (35%), Positives = 49/76 (64%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 461
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 462 PAMYVAIQAVLSLYAS 509
PA ++ +VL+ +A+
Sbjct: 63 PAFFLCKNSVLTAFAN 78
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYAL 586
GR+ G+V+DSG + VP+++GY L
Sbjct: 79 GRSNGLVIDSGATQTSAVPVHDGYVL 104
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 198
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 57.6 bits (133), Expect = 7e-09
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALP 589
GRTTG+V DSGDGVSH VPIYEGYALP
Sbjct: 25 GRTTGVVFDSGDGVSHNVPIYEGYALP 51
Score = 50.8 bits (116), Expect = 9e-07
Identities = 30/58 (51%), Positives = 34/58 (58%)
Frame = +3
Query: 438 IMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLD 611
IMFE FN+PA+YVAIQAVLSLYAS + P + PHAILRLD
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLD 58
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 67 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 213
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 276 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 389
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.32
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 518 TGIVLDSGDGVSHTVPI 568
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 195 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 79
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2
Query: 518 TGIVLDSGDGVSHTVPIYEGYAL 586
TG V+DSGDGV+H +P+ EGY +
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVI 84
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 273 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 425
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 31.5 bits (68), Expect = 0.56
Identities = 21/88 (23%), Positives = 36/88 (40%)
Frame = +3
Query: 339 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
T E VAPE + E ++P+ T + ET TP VA + ++ +V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 519 PVSCWTPATVSPTPCPSTKDTHSPHAIL 602
+ TV+P + + T +P +
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAPETTM 4267
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/88 (23%), Positives = 36/88 (40%)
Frame = +3
Query: 339 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
T E VAPE + E+ L + +T + ET TP VA + + ++ P
Sbjct: 4915 TMVPETTVAPET--TMAPESTLAAETTMAPVTTVASETTKTPDTTVAPETTMVPEGTLAP 4972
Query: 519 PVSCWTPATVSPTPCPSTKDTHSPHAIL 602
+ TV+P + + T +P +
Sbjct: 4973 ETTMAPETTVAPETTMAPETTVAPETTM 5000
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +3
Query: 351 ELRVAPE--EHP--VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
E +APE E P + E+ P+ MT + ET TP VA + + +++ P
Sbjct: 4372 ETTMAPESTEAPETTMAPESTEAPETTMAPMTTVASETTKTPDTPVAPETNMVAESTLAP 4431
Query: 519 PVSCWTPATVSPTPCPSTKDTHSP 590
+ TV+P + + T SP
Sbjct: 4432 ETTMTPEITVAPKTTMAPETTVSP 4455
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Frame = +3
Query: 351 ELRVAPE--EHP--VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
E +APE E P ++ E + P+ + T + +T TP A + ++ A+V
Sbjct: 4264 ETTMAPESTEAPETTIVPETTVAPETTKAPETTVASKTTKTPETTFAPETTMAPEATVAE 4323
Query: 519 PVSCWTPATVSPTPCPSTKDTHSPHAIL 602
+ TV+P + + T +P +
Sbjct: 4324 ETTMAPVTTVAPETTKAPESTEAPETTM 4351
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 30.7 bits (66), Expect = 0.97
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +3
Query: 351 ELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
E VAPE L E P+ + +T P VAI++ L+L ++V P
Sbjct: 19 ETTVAPETTSAADTTLAPETTFAPETTVPPESTAAPDTTVAPETTVAIESTLALESTVAP 78
Query: 519 PVSCWTPATVSPTPCPSTKDTHSP 590
+ T TV+P + + T +P
Sbjct: 79 ETTVATETTVAPETTAAPESTLAP 102
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 30.7 bits (66), Expect = 0.97
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 442 CSKHSTRPPCTSPSKPCSRCTRRSYHRYRAG 534
C H+ R P T+PS PC S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 30.7 bits (66), Expect = 0.97
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 30.7 bits (66), Expect = 0.97
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +3
Query: 351 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
E APE V T AP + P+ +T + ET PA A++ +L ++VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 519 PVSCWTPATVSP--TPCPST 572
+ + TV+P T P+T
Sbjct: 1383 ETTASSETTVAPETTDAPAT 1402
Score = 27.5 bits (58), Expect = 9.1
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Frame = +3
Query: 339 TFYNELRVAPEEHPVLLTEAP----LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 506
T E VAPE V T AP L P+ T + ET P +A + ++
Sbjct: 2525 TMAPETTVAPETTMVPETTAPPETTLAPETTAVPDTTVAGETTAAPDTTMAPEITVAPET 2584
Query: 507 SVVPPVSCWTPATVSPTPCPSTKDTHSP 590
+VVP + TV+P + T +P
Sbjct: 2585 TVVPETTSAPVTTVAPESTLVPETTFAP 2612
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 398 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 490
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 165 VPLDRGKAPPSGRDGRYGTEGLLCRR*GTEKRGILTLKYPIEHGIVTNW--DDMEKIWHH 338
V L + +GR+ G+ +CR+ K ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 339 TFYN 350
T N
Sbjct: 497 TCPN 500
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYNE 353
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 85 EVAALVVDNGSGMCKAGFAGDDAPRAV 165
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = -3
Query: 261 LFSLCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQ 97
+F+ CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 461 IFATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNK 519
Query: 96 RGNFFVAHLELVK 58
G V L+ K
Sbjct: 520 HGQVDVLLLDFQK 532
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +2
Query: 356 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVGRTTGIVLD 535
ACR R P P P+ + ++D D +I R P R + V +T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 536 SGDGVSHTVPI 568
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 390 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTP 560
T+AP L PK T + ET + PA+ +A + + +V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 561 CPSTKDTHSP 590
+T+ T +P
Sbjct: 575 TAATEITAAP 584
>SB_11456| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40)
Length = 391
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 480 IQAVLSLYASVVPPVSCWTP-ATVSPTPCPSTKDTHSPHAI 599
++ +L+A+VV V+CWTP A + S+ H P +
Sbjct: 250 VKVTKTLFATVVGFVTCWTPIAVIDMLDAYSSHQVHVPREV 290
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 28.3 bits (60), Expect = 5.2
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = -2
Query: 322 SMSSQLVTIPCSMGYLRVRIPLFSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHL 143
+++SQ VT M R +PL S P + KSP V + P PD + R E HH
Sbjct: 792 ALTSQQVTSSHDMP--RTSMPLVSYPPHMKKSPFVVHHP--PDSAS--RHGNQAPEAHH- 844
Query: 142 LRNRPCTYRS 113
+ P +Y+S
Sbjct: 845 --HEPGSYKS 852
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = -2
Query: 256 FSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 77
+ P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 128 YRAPLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Frame = +3
Query: 357 RVAPEEHPVLLTEAPLNPKANREKMTQIMFET----FNTPAMYVAIQAVLSLYASVVP-- 518
++A + +P + E N K + +K+ Q M +T +N P + L +A +P
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMTLLYNMPKIMRKFAFELPNWAPKIPLP 925
Query: 519 ---PVSCWTPATVSPTPCPSTKDTHSPH 593
P T A +P+ +D + PH
Sbjct: 926 TEPPTEKMTEAPTTPSAVHGEEDKNKPH 953
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L LC + ++LSH + H L +HG R +SCET L T
Sbjct: 854 LTCLCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Frame = -2
Query: 313 SQLVTIPCSMGYLRVRIPLFSVPHLLHKS---------PSVPYRPSRPDGGAFP 179
S+ ++IP G+ R L P L H S P+ PY PS+ G +FP
Sbjct: 3759 SKPISIPSRDGHARAATSLPGSPQLSHLSGRFSSDDVSPTPPYSPSQKQGFSFP 3812
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +3
Query: 378 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSP- 554
PVL A P A + TQ + P ++ V + A PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTVPPP 81
Query: 555 --TPCPST 572
T P+T
Sbjct: 82 VVTDAPTT 89
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 185 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 75
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 241 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 95
LL +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/81 (23%), Positives = 35/81 (43%)
Frame = +3
Query: 360 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTP 539
VAPE ++ E + P+ T + ET + VA + + A++VP +
Sbjct: 963 VAPES--TVMPETTVAPETTMAPETTVAAETTASAETTVAPETTAAPDATLVPDTTLAPE 1020
Query: 540 ATVSPTPCPSTKDTHSPHAIL 602
TV+P + + T +P +
Sbjct: 1021 TTVAPESTKAPETTMAPETTM 1041
Score = 27.5 bits (58), Expect = 9.1
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Frame = +3
Query: 339 TFYNELRVAPEEHPVLLTEAP----LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 506
T E VAPE V T AP L P+ T + ET P +A + ++
Sbjct: 1273 TMAPETTVAPETTMVPETTAPPETTLAPETTAVPDTTVAGETTAAPDTTMAPEITVAPET 1332
Query: 507 SVVPPVSCWTPATVSPTPCPSTKDTHSP 590
+VVP + TV+P + T +P
Sbjct: 1333 TVVPETTSAPVTTVAPESTLVPETTFAP 1360
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,343,936
Number of Sequences: 59808
Number of extensions: 582860
Number of successful extensions: 2336
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2315
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -