Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0559
(611 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 189 1e-48
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 189 1e-48
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 189 1e-48
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 187 4e-48
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 187 4e-48
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 187 4e-48
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 187 4e-48
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 186 8e-48
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 186 8e-48
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 169 2e-42
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 163 1e-40
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 160 8e-40
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 110 6e-25
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 95 2e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 83 2e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 68 4e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 57 8e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 50 2e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.085
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 29 1.8
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 2.4
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 2.4
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.2
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.2
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 4.2
At1g66180.1 68414.m07512 aspartyl protease family protein contai... 28 4.2
At5g18270.2 68418.m02148 no apical meristem (NAM) family protein... 28 5.6
At5g18270.1 68418.m02147 no apical meristem (NAM) family protein... 28 5.6
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.4
At5g45620.2 68418.m05607 26S proteasome regulatory subunit, puta... 27 9.8
At5g45620.1 68418.m05608 26S proteasome regulatory subunit, puta... 27 9.8
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 27 9.8
At4g19006.1 68417.m02801 26S proteasome regulatory subunit, puta... 27 9.8
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 9.8
At2g16570.1 68415.m01900 amidophosphoribosyltransferase / glutam... 27 9.8
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 189 bits (461), Expect = 1e-48
Identities = 96/120 (80%), Positives = 100/120 (83%), Gaps = 1/120 (0%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLD 611
QIMFETFNTPAMYVAIQAVLSLYAS + + VS T P + PHAILRLD
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 189 bits (460), Expect = 1e-48
Identities = 96/120 (80%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLD 611
QIMFETFNTPAMYVAIQAVLSLYAS + + VS T P + PHAILRLD
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 189 bits (460), Expect = 1e-48
Identities = 96/120 (80%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLD 611
QIMFETFNTPAMYVAIQAVLSLYAS + + VS T P + PHAILRLD
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 187 bits (456), Expect = 4e-48
Identities = 95/120 (79%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLD 611
QIMFETFN PAMYVAIQAVLSLYAS + + VS T P + PHAILRLD
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 187 bits (456), Expect = 4e-48
Identities = 93/120 (77%), Positives = 100/120 (83%), Gaps = 1/120 (0%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLD 611
QIMFETFN+PAMYVAIQAVLSLYAS + + VS T P + PHAILRLD
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAILRLD 181
Score = 104 bits (249), Expect = 5e-23
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 187 bits (456), Expect = 4e-48
Identities = 93/120 (77%), Positives = 100/120 (83%), Gaps = 1/120 (0%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLD 611
QIMFETFN+PAMYVAIQAVLSLYAS + + VS T P + PHAILRLD
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAILRLD 181
Score = 104 bits (249), Expect = 5e-23
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 187 bits (456), Expect = 4e-48
Identities = 93/120 (77%), Positives = 100/120 (83%), Gaps = 1/120 (0%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLD 611
QIMFETFN+PAMYVAIQAVLSLYAS + + VS T P + PHAILRLD
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAILRLD 181
Score = 104 bits (249), Expect = 5e-23
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 186 bits (454), Expect = 8e-48
Identities = 94/120 (78%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLD 611
QIMFETFN PAMYVAIQAVLSLYAS + + VS T P + PHAILRLD
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 186 bits (454), Expect = 8e-48
Identities = 94/120 (78%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLD 611
QIMFETFN PAMYVAIQAVLSLYAS + + VS T P + PHAILRLD
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Score = 108 bits (260), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 169 bits (410), Expect = 2e-42
Identities = 82/120 (68%), Positives = 95/120 (79%), Gaps = 1/120 (0%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
+RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMT
Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMT 123
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLD 611
QIMFE+F P+MY+ IQAVLSLY+S + + VS T P + PHAILRLD
Sbjct: 124 QIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 182
Score = 101 bits (243), Expect = 3e-22
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 163 bits (395), Expect = 1e-40
Identities = 77/119 (64%), Positives = 91/119 (76%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
+ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMT
Sbjct: 18 RSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMT 77
Query: 435 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPHAILRLD 611
QIMFETF P+MY+ +QA LSL+AS + P + + PHAILRLD
Sbjct: 78 QIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLD 136
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 160 bits (388), Expect = 8e-40
Identities = 86/138 (62%), Positives = 96/138 (69%), Gaps = 1/138 (0%)
Frame = +3
Query: 201 RDGRYGTEGLLCRR*GTEKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 380
RDG E + G R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 381 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPT 557
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+S V VS T
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 558 PCPSTKDTHSPHAILRLD 611
P + PH ILRLD
Sbjct: 154 -VPVYEGYALPHGILRLD 170
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE 246
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEE 48
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 110 bits (265), Expect = 6e-25
Identities = 46/86 (53%), Positives = 62/86 (72%)
Frame = +3
Query: 249 TEKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 428
+E R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 429 MTQIMFETFNTPAMYVAIQAVLSLYA 506
M + MFE +N +++ IQAVL+LYA
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYA 145
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 243
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
Score = 44.0 bits (99), Expect = 8e-05
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYALP 589
G TG+V+DSGDGV+H VP+ +GY+ P
Sbjct: 147 GLLTGLVIDSGDGVTHVVPVVDGYSFP 173
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = +3
Query: 273 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 452
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 453 FNTPAMYVAIQAVLSLYA 506
FN P +Y+A+ +VL+L A
Sbjct: 146 FNVPGLYIAVNSVLALAA 163
Score = 37.1 bits (82), Expect = 0.009
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 518 TGIVLDSGDGVSHTVPIYEGYAL 586
TG+V+D GDG +H VP+ EGY +
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVI 195
Score = 35.9 bits (79), Expect = 0.021
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 94 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 180
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 82.6 bits (195), Expect = 2e-16
Identities = 35/85 (41%), Positives = 56/85 (65%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
++MFE + PA+++A VL+ +A+
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFAT 169
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 183
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYAL 586
GR T +V+D G G + P+++GY L
Sbjct: 170 GRATSLVVDCGGGSTTISPVHDGYVL 195
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 68.1 bits (159), Expect = 4e-12
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 458
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 459 TPAMYVAIQAVLSLYA 506
Y + QAVLSLYA
Sbjct: 117 VSGFYASEQAVLSLYA 132
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 94 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 186
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 428
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 183
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 57.2 bits (132), Expect = 8e-09
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +3
Query: 273 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 452
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 453 FNTPAMYVA-IQAVLSLYASVVPPVS 527
F ++Y+A Q+++ LY + P S
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDS 146
Score = 32.7 bits (71), Expect = 0.20
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 189
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 458
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 459 TPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHS 587
PA+ + A S + + + C V CP THS
Sbjct: 145 VPAVAFGVDAAFSYKYNQLHGI-CKKDGIVL---CPGFTTTHS 183
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 243
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.085
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 218 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 81
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Frame = +3
Query: 507 SVVPPVSCWTPATVSPTPCP-----STKDTHSPH 593
S+ PP+SC TP PCP DTH H
Sbjct: 644 SIPPPLSCGTPVPSCQLPCPIPQPCGHSDTHGCH 677
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +3
Query: 339 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 488
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 489 VLSLYAS 509
VL+LYA+
Sbjct: 241 VLALYAA 247
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +3
Query: 339 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 488
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 489 VLSLYAS 509
VL+LYA+
Sbjct: 241 VLALYAA 247
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 267 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 428
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 267 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 428
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +2
Query: 395 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 496
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At1g66180.1 68414.m07512 aspartyl protease family protein contains
Pfam PF00026: Eukaryotic aspartyl protease profile;
similar to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) [Nicotiana tabacum]
Length = 430
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 322 SMSSQLVTIPCSMGYLRVRIPLFSVP 245
S+SS T+PCS + RIP F++P
Sbjct: 116 SLSSSFSTLPCSHPLCKPRIPDFTLP 141
>At5g18270.2 68418.m02148 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 27.9 bits (59), Expect = 5.6
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +3
Query: 294 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 467
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 468 MYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSP 590
I +L S +PP+ P+ +S T P+ K + P
Sbjct: 195 SLENIDHLLDF--SSLPPLI--DPSFMSQTEQPNFKPINPP 231
>At5g18270.1 68418.m02147 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 27.9 bits (59), Expect = 5.6
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +3
Query: 294 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 467
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 468 MYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSP 590
I +L S +PP+ P+ +S T P+ K + P
Sbjct: 195 SLENIDHLLDF--SSLPPLI--DPSFMSQTEQPNFKPINPP 231
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 194 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 72
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At5g45620.2 68418.m05607 26S proteasome regulatory subunit,
putative (RPN9) contains similarity to 26S proteasome
subunit p40.5 GI:3618343 from [Homo sapiens]
Length = 350
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -2
Query: 328 IFSMSSQLVTIPCSMGYLRVRIPLFSVPHLLHKSPSV 218
IFS ++ TIP S+ R ++ + V HLL KS SV
Sbjct: 290 IFSRPAEDRTIPLSIIAERTKLSIEDVEHLLMKSLSV 326
>At5g45620.1 68418.m05608 26S proteasome regulatory subunit,
putative (RPN9) contains similarity to 26S proteasome
subunit p40.5 GI:3618343 from [Homo sapiens]
Length = 386
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -2
Query: 328 IFSMSSQLVTIPCSMGYLRVRIPLFSVPHLLHKSPSV 218
IFS ++ TIP S+ R ++ + V HLL KS SV
Sbjct: 290 IFSRPAEDRTIPLSIIAERTKLSIEDVEHLLMKSLSV 326
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 389 H*GSPQPQGQQREDDPDHVRN 451
H GSP+ +G + EDD D + N
Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111
>At4g19006.1 68417.m02801 26S proteasome regulatory subunit,
putative (RPN9) similar to 26S proteasome subunit p40.5
[Homo sapiens] gi|3618343|dbj|BAA33214
Length = 386
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -2
Query: 328 IFSMSSQLVTIPCSMGYLRVRIPLFSVPHLLHKSPSV 218
IFS ++ TIP S+ R ++ + V HLL KS SV
Sbjct: 290 IFSRPAEDRTIPLSVIAERTKLSIEDVEHLLMKSLSV 326
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 306 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 455
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
>At2g16570.1 68415.m01900 amidophosphoribosyltransferase / glutamine
phosphoribosylpyrophosphate amidotransferase /
phosphoribosyldiphosphate 5-amidotransferase identical
to amidophosphoribosyltransferase [Arabidopsis thaliana]
GI:469193; identical to cDNA
amidophosphoribosyltransferase GI:469192
Length = 566
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2
Query: 325 FSMSSQLVTIPCSMGYLRVRIPLFSVPHLLHKSPSVPYRPS 203
FS S L+T P + Y +PLF P L K P + PS
Sbjct: 7 FSSSLSLITKPNNSSYTNQPLPLFPKPFL--KPPHLSLLPS 45
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,812,723
Number of Sequences: 28952
Number of extensions: 380750
Number of successful extensions: 1353
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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