BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0558 (636 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_2306| Best HMM Match : MecA_N (HMM E-Value=2.3) 42 4e-04 SB_58595| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002 SB_6954| Best HMM Match : RVT_1 (HMM E-Value=0) 38 0.007 SB_54400| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028 SB_3879| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.064 SB_2139| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11 SB_34598| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11 SB_34486| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11 SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11 SB_56875| Best HMM Match : LON (HMM E-Value=0) 33 0.15 SB_41990| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05) 33 0.15 SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0) 33 0.15 SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15 SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26 SB_6009| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45 SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78 SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0 SB_17675| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0 SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.0 SB_58227| Best HMM Match : HSBP1 (HMM E-Value=0.28) 31 1.0 SB_53753| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4 SB_24162| Best HMM Match : RVT_1 (HMM E-Value=0) 30 1.4 SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 30 1.4 SB_10781| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4 SB_57858| Best HMM Match : RNA_pol_A_CTD (HMM E-Value=5.7) 30 1.8 SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 1.8 SB_9604| Best HMM Match : Cbl_N3 (HMM E-Value=1.2) 29 2.4 SB_28749| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2 SB_21074| Best HMM Match : NadA (HMM E-Value=2) 29 4.2 SB_23712| Best HMM Match : HSBP1 (HMM E-Value=0.35) 28 5.5 SB_58944| Best HMM Match : fn3 (HMM E-Value=0.88) 28 5.5 SB_49186| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3 SB_21205| Best HMM Match : Ribosomal_L30_N (HMM E-Value=0.75) 28 7.3 SB_10854| Best HMM Match : Hormone_4 (HMM E-Value=8.4) 28 7.3 SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3 SB_35523| Best HMM Match : RVT_1 (HMM E-Value=0) 28 7.3 SB_24072| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3 SB_20293| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3 SB_900| Best HMM Match : Plasmodium_HRP (HMM E-Value=2.1) 27 9.7 SB_49847| Best HMM Match : VAR1 (HMM E-Value=5.2) 27 9.7 >SB_2306| Best HMM Match : MecA_N (HMM E-Value=2.3) Length = 262 Score = 41.9 bits (94), Expect = 4e-04 Identities = 21/73 (28%), Positives = 35/73 (47%) Frame = +3 Query: 255 RKRAKILEDDCYRAYIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDV 434 R+ K L ++ Y+ + S+ +PK FW + + K +N++P T+ Y G S D Sbjct: 25 RRECKTLIAAKHKLYVEGLSQSLKSNPKKFWSYFRA-KTKSNSIPDTVLYNGSKFYSPDE 83 Query: 435 ICNLFCEYFQSNF 473 F +F S F Sbjct: 84 KAEAFNRFFFSTF 96 >SB_58595| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1462 Score = 39.9 bits (89), Expect = 0.002 Identities = 20/73 (27%), Positives = 35/73 (47%) Frame = +3 Query: 255 RKRAKILEDDCYRAYIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDV 434 R+ K L ++ Y+ + S+ +PK FW + + K +N++P T+T+ G S D Sbjct: 409 RRECKTLIAAKHKLYVEGLSQSLKSNPKKFWSYFRA-KTKSNSIPDTVTHNGSKFYSPDE 467 Query: 435 ICNLFCEYFQSNF 473 +F S F Sbjct: 468 KAEALNRFFFSTF 480 >SB_6954| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 943 Score = 37.9 bits (84), Expect = 0.007 Identities = 17/62 (27%), Positives = 31/62 (50%) Frame = +3 Query: 288 YRAYIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQS 467 ++ Y+ + S+ +PK FW + + K +N++P T+T+ G S D +F S Sbjct: 12 HKLYVEGLSQSLKSNPKKFWSYFRA-KTKSNSIPDTVTHNGSKFYSPDEKAEALNRFFFS 70 Query: 468 NF 473 F Sbjct: 71 TF 72 >SB_54400| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 723 Score = 35.9 bits (79), Expect = 0.028 Identities = 16/64 (25%), Positives = 32/64 (50%) Frame = +3 Query: 297 YIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNFL 476 YI ++ I +PK FWRF+++ K + ++P G+ +S + ++F+ N Sbjct: 375 YINNMIGDIKSNPKPFWRFIRSQKKDSQSMPPLKATNGRLVESDIGKSEMLNQHFRENLS 434 Query: 477 NTAT 488 + T Sbjct: 435 DEDT 438 >SB_3879| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 693 Score = 34.7 bits (76), Expect = 0.064 Identities = 14/64 (21%), Positives = 32/64 (50%) Frame = +3 Query: 297 YIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNFL 476 YI ++ + +PK FW F+++ + + ++P G+ +S + ++F+ NF Sbjct: 599 YINNMIGDVKSNPKPFWHFIRSQRKDSQSMPPLKATNGRLVESDIGKSEMLNQHFRENFS 658 Query: 477 NTAT 488 + T Sbjct: 659 DEDT 662 >SB_2139| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 296 Score = 33.9 bits (74), Expect = 0.11 Identities = 16/55 (29%), Positives = 30/55 (54%) Frame = +3 Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNF 473 V S++ +PK FW +VK+ + +++PS + +G + D + + FQS F Sbjct: 99 VGGSLVSNPKKFWNYVKSRRSEVSDIPSLRSNDGVSISPRDK-AQVLNKQFQSVF 152 >SB_34598| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 306 Score = 33.9 bits (74), Expect = 0.11 Identities = 16/59 (27%), Positives = 27/59 (45%) Frame = +3 Query: 297 YIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNF 473 Y+ S+ I +PK FW+F+++ + ++PS T S + FQ NF Sbjct: 41 YVNSIIGDIKTNPKPFWKFIRSQRKDDQSMPSLKTPSRTLAKSDMKKAEILNHQFQRNF 99 >SB_34486| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 203 Score = 33.9 bits (74), Expect = 0.11 Identities = 16/55 (29%), Positives = 30/55 (54%) Frame = +3 Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNF 473 V S++ +PK FW +VK+ + +++PS + +G + D + + FQS F Sbjct: 41 VGGSLVSNPKKFWNYVKSRRSEVSDIPSLRSNDGVSISPRDK-AQVLNKQFQSVF 94 >SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 788 Score = 33.9 bits (74), Expect = 0.11 Identities = 16/55 (29%), Positives = 30/55 (54%) Frame = +3 Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNF 473 V S++ +PK FW +VK+ + +++PS + +G + D + + FQS F Sbjct: 23 VGGSLVSNPKKFWNYVKSRRSEVSDIPSLRSNDGVSISPRDK-AQVLNKQFQSVF 76 >SB_56875| Best HMM Match : LON (HMM E-Value=0) Length = 925 Score = 33.5 bits (73), Expect = 0.15 Identities = 13/64 (20%), Positives = 34/64 (53%) Frame = +3 Query: 297 YIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNFL 476 YI ++ ++ +PK FW+F+++ + + ++P G+ +S + ++F+ +F Sbjct: 841 YINNMIGNVKSNPKPFWQFIRSQRKDSQSMPPLKATNGRLVESDIGKSEMLNQHFRDSFS 900 Query: 477 NTAT 488 + T Sbjct: 901 DEDT 904 >SB_41990| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05) Length = 455 Score = 33.5 bits (73), Expect = 0.15 Identities = 13/64 (20%), Positives = 34/64 (53%) Frame = +3 Query: 297 YIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNFL 476 YI ++ ++ +PK FW+F+++ + + ++P G+ +S + ++F+ +F Sbjct: 371 YINNMIGNVKSNPKPFWQFIRSQRKDSQSMPPLKATNGRLVESDIGKSEMLNQHFRDSFS 430 Query: 477 NTAT 488 + T Sbjct: 431 DEDT 434 >SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 931 Score = 33.5 bits (73), Expect = 0.15 Identities = 16/55 (29%), Positives = 30/55 (54%) Frame = +3 Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNF 473 V S++ +PK FW +VK+ + +++PS + +G + D + + FQS F Sbjct: 313 VGGSLVSNPKKFWNYVKSRRSEVSDIPSLRSNDGISISPRDK-AQVLNKQFQSVF 366 >SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2124 Score = 33.5 bits (73), Expect = 0.15 Identities = 16/55 (29%), Positives = 30/55 (54%) Frame = +3 Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNF 473 V S++ +PK FW +VK+ + +++PS + +G + D + + FQS F Sbjct: 1703 VGGSLVSNPKKFWNYVKSRRSEVSDIPSLRSNDGISISPRDK-AQVLNKQFQSVF 1756 >SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2529 Score = 32.7 bits (71), Expect = 0.26 Identities = 12/41 (29%), Positives = 24/41 (58%) Frame = +3 Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGD 431 V S++ +PK FW +VK+ + +++PS + +G + D Sbjct: 1044 VGGSLVSNPKKFWNYVKSRRSEVSDIPSLRSNDGVSISPRD 1084 >SB_6009| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 895 Score = 31.9 bits (69), Expect = 0.45 Identities = 18/65 (27%), Positives = 31/65 (47%) Frame = +3 Query: 267 KILEDDCYRAYIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNL 446 KI + D Y ++ +S + K + + + S ++LPST + G+ I N Sbjct: 599 KIAKRDYYDKKLSEYKSDVKKTWRILNEVINRRQ-SNSSLPSTFKFAGREVGDPMEIANG 657 Query: 447 FCEYF 461 FC+YF Sbjct: 658 FCDYF 662 >SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1360 Score = 31.1 bits (67), Expect = 0.78 Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 5/84 (5%) Frame = +3 Query: 264 AKILEDDCYRAYIASVESSILKD-PKFFWRFVKTNKGSANNLPSTLTYEG--QTTDS--G 428 +K+++D + Y+ ++ + LKD PK FW +V+++K + +P + TD+ Sbjct: 517 SKLIKDS-HNDYLNNIIGNSLKDNPKKFWSYVRSSKSESIGIPPLKNNDSSVSVTDAHKA 575 Query: 429 DVICNLFCEYFQSNFLNTATADHS 500 + + N F F L T +S Sbjct: 576 ETLNNFFHSVFTQEQLPTPVLGNS 599 >SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 591 Score = 30.7 bits (66), Expect = 1.0 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = +3 Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDV 434 + S+ DPK FWR+VK ++ +P T + T+D+G + Sbjct: 273 IGESLQSDPKKFWRYVKRSRSENVGIP---TLQRFTSDNGQL 311 >SB_17675| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 228 Score = 30.7 bits (66), Expect = 1.0 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -2 Query: 464 LEVFTKKITDNVPRVSCLSFVCESRRKVICATFVSFNKSPE 342 +E K + N PR LS +C+S +V +FVSF K PE Sbjct: 148 IEKRCKSMNPNYPRDK-LSSICDSESRVCEKSFVSFAKLPE 187 >SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) Length = 339 Score = 30.7 bits (66), Expect = 1.0 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = +3 Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDV 434 + S+ DPK FWR+VK ++ +P T + T+D+G + Sbjct: 114 IGESLQSDPKKFWRYVKRSRSENVGIP---TLQRFTSDNGQL 152 >SB_58227| Best HMM Match : HSBP1 (HMM E-Value=0.28) Length = 565 Score = 30.7 bits (66), Expect = 1.0 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Frame = +3 Query: 267 KILEDDCYRAYIASVESSILKDPKFFWRFVKT--NKGSANN-LPSTLTYEGQTTDSGDVI 437 KI + D Y ++ +S + K WR + N+ +N+ LPST G+ I Sbjct: 374 KIAKRDYYDKKLSEYKSDVKKT----WRILNEVINRRQSNSRLPSTFKVAGREVSDPMEI 429 Query: 438 CNLFCEYF 461 N FC+YF Sbjct: 430 ANGFCDYF 437 >SB_53753| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 252 Score = 30.3 bits (65), Expect = 1.4 Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 1/43 (2%) Frame = +3 Query: 264 AKILEDDCYRAYIASVESSILKD-PKFFWRFVKTNKGSANNLP 389 +K+++D + Y+ ++ + LKD PK FW +V+++K + +P Sbjct: 31 SKLIKDS-HNDYLNNIIGNSLKDNPKKFWSYVRSSKSESIGIP 72 >SB_24162| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 801 Score = 30.3 bits (65), Expect = 1.4 Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 1/43 (2%) Frame = +3 Query: 264 AKILEDDCYRAYIASVESSILKD-PKFFWRFVKTNKGSANNLP 389 +K+++D + Y+ ++ + LKD PK FW +V+++K + +P Sbjct: 234 SKLIKDS-HNDYLNNIIGNSLKDNPKKFWSYVRSSKSESIGIP 275 >SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 274 Score = 30.3 bits (65), Expect = 1.4 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 61 CFIFAKPLKSVLLSLNCIVESIMLLVCSHPGTHP 162 C + AKP++ LLS++CI + + S THP Sbjct: 239 CRVVAKPVEDNLLSIDCIAYEVTFGLRSRFATHP 272 >SB_10781| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 457 Score = 30.3 bits (65), Expect = 1.4 Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 1/43 (2%) Frame = +3 Query: 264 AKILEDDCYRAYIASVESSILKD-PKFFWRFVKTNKGSANNLP 389 +K+++D + Y+ ++ + LKD PK FW +V+++K + +P Sbjct: 31 SKLIKDS-HNDYLNNIIGNSLKDNPKKFWSYVRSSKSESIGIP 72 >SB_57858| Best HMM Match : RNA_pol_A_CTD (HMM E-Value=5.7) Length = 280 Score = 29.9 bits (64), Expect = 1.8 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Frame = +3 Query: 255 RKRAKILEDDCYRAYIASVESSILKD-PKFFWRFVKTNKGSANNLPSTLTYEGQTTDS-- 425 +K KI YIA +S LK+ PK FW ++K+ + +P + TDS Sbjct: 35 QKLFKIKMKKAQDEYIADTLNSDLKEKPKKFWSYIKSKRQDQVGVPPLKEHGIVKTDSMS 94 Query: 426 -GDVICNLFCEYF 461 +++ N F + F Sbjct: 95 KAEILSNQFQQVF 107 >SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) Length = 272 Score = 29.9 bits (64), Expect = 1.8 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = +3 Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNF 473 + S+ DPK FWR+VK ++ +P TL + S +FQS F Sbjct: 56 IRESLQSDPKKFWRYVKRSRSENVGIP-TLRKDNMLFISDADKAEALNHHFQSVF 109 >SB_9604| Best HMM Match : Cbl_N3 (HMM E-Value=1.2) Length = 317 Score = 29.5 bits (63), Expect = 2.4 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 4/48 (8%) Frame = +3 Query: 336 KFFWRF----VKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQS 467 K+ WR + K N+LPST I N FC+YF S Sbjct: 21 KYTWRILNEVINNCKSKTNSLPSTFKVADSKISDPVKIANDFCDYFTS 68 >SB_28749| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 196 Score = 29.1 bits (62), Expect = 3.2 Identities = 12/43 (27%), Positives = 28/43 (65%), Gaps = 1/43 (2%) Frame = +3 Query: 264 AKILEDDCYRAYIASVESSILKD-PKFFWRFVKTNKGSANNLP 389 +K+++D + Y+ ++ + LKD PK FW +++++K + +P Sbjct: 31 SKLIKDS-HNDYLNNIIGNSLKDNPKKFWSYLRSSKSESIGIP 72 >SB_21074| Best HMM Match : NadA (HMM E-Value=2) Length = 358 Score = 28.7 bits (61), Expect = 4.2 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = +3 Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPS 392 + S+ DPK FWR+VK ++ +P+ Sbjct: 114 IGESLQSDPKKFWRYVKRSRSENVGIPT 141 >SB_23712| Best HMM Match : HSBP1 (HMM E-Value=0.35) Length = 437 Score = 28.3 bits (60), Expect = 5.5 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Frame = +3 Query: 291 RAYIASVESSILKDPKFFWRFVKT--NKGSANN-LPSTLTYEGQTTDSGDVICNLFCEYF 461 R Y S + K WR + N+ +N+ LPST G+ I N FC+YF Sbjct: 316 RDYYDKKLSEYKSNVKKTWRILNEVINRRQSNSRLPSTFKVAGREVSDPMEIANGFCDYF 375 >SB_58944| Best HMM Match : fn3 (HMM E-Value=0.88) Length = 697 Score = 28.3 bits (60), Expect = 5.5 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 14/99 (14%) Frame = +3 Query: 249 SPRKRAKILEDDCYRAYIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEG------ 410 S R++ K L + + S+E + K FW +K K + LPS ++ Sbjct: 150 SLREKFKALRES-RENFFQSLERDYKNNTKRFWSVLK-QKSKSRGLPSHVSMATVNPPTG 207 Query: 411 --------QTTDSGDVICNLFCEYFQSNFLNTATADHST 503 T D + I NLF +YF S FL + D +T Sbjct: 208 SQDPTPLRTTADDPEAIANLFNKYFASVFLKDSLQDLNT 246 >SB_49186| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1776 Score = 27.9 bits (59), Expect = 7.3 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 3/38 (7%) Frame = -2 Query: 461 EVFTKKITDNVPRVSC---LSFVCESRRKVICATFVSF 357 E+FT+ + R C + ++CE+ +VIC F S+ Sbjct: 256 ELFTRSFCELFTRSFCGLFIRYICEAFTRVICEAFTSY 293 >SB_21205| Best HMM Match : Ribosomal_L30_N (HMM E-Value=0.75) Length = 505 Score = 27.9 bits (59), Expect = 7.3 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +3 Query: 414 TTDSGDVICNLFCEYFQSNFLNTATADHST 503 T D + I NLF +YF S FL + D +T Sbjct: 365 TADDPEAIANLFNKYFASVFLKDSLQDLNT 394 >SB_10854| Best HMM Match : Hormone_4 (HMM E-Value=8.4) Length = 217 Score = 27.9 bits (59), Expect = 7.3 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +3 Query: 414 TTDSGDVICNLFCEYFQSNFLNTATADHST 503 T D + I NLF +YF S FL + D +T Sbjct: 19 TADDPEAIANLFNKYFASVFLKDSLQDLNT 48 >SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1480 Score = 27.9 bits (59), Expect = 7.3 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +3 Query: 414 TTDSGDVICNLFCEYFQSNFLNTATADHST 503 T D + I NLF +YF S FL + D +T Sbjct: 1334 TADDPEAIANLFNKYFASVFLKDSLQDLNT 1363 >SB_35523| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 1410 Score = 27.9 bits (59), Expect = 7.3 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +3 Query: 414 TTDSGDVICNLFCEYFQSNFLNTATADHST 503 T D + I NLF +YF S FL + D +T Sbjct: 372 TADDPEAIANLFNKYFASVFLKDSLQDLNT 401 >SB_24072| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 822 Score = 27.9 bits (59), Expect = 7.3 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 3/87 (3%) Frame = +3 Query: 255 RKRAKILEDDCYRAYIASVESSILKDPKFFWRFVK---TNKGSANNLPSTLTYEGQTTDS 425 R+ AK + + + +ES I +PK FW +VK +NK S N + T + Sbjct: 317 RRAAKQMLSKKKKEHAEKLESVISDNPKRFWGYVKSCTSNKPSPNFFRDGHAFVTYTKN- 375 Query: 426 GDVICNLFCEYFQSNFLNTATADHSTA 506 + NL YF F +A+ + +A Sbjct: 376 ---MANLLNRYFNYIFSPSASEEFVSA 399 >SB_20293| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1821 Score = 27.9 bits (59), Expect = 7.3 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +3 Query: 414 TTDSGDVICNLFCEYFQSNFLNTATADHST 503 T D + I NLF +YF S FL + D +T Sbjct: 320 TADDPEAIANLFNKYFASVFLKDSLQDLNT 349 >SB_900| Best HMM Match : Plasmodium_HRP (HMM E-Value=2.1) Length = 249 Score = 27.5 bits (58), Expect = 9.7 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Frame = +3 Query: 450 CEYFQSNFLNTATAD-HSTADNSWVLIQTLHTLT 548 C + ++ L T D H+TADN W T+H T Sbjct: 198 CAHNDTHTLCTIPVDVHATADNDWRHAHTIHITT 231 >SB_49847| Best HMM Match : VAR1 (HMM E-Value=5.2) Length = 254 Score = 27.5 bits (58), Expect = 9.7 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 7/84 (8%) Frame = +3 Query: 255 RKRAKILEDDCYRAYIASV-ESSILKDPKFFWRFVKTNKGSANNLPSTLTYE------GQ 413 RK + + Y YI ++ SS + PK FWRFVK+ + +N+ L Y Sbjct: 88 RKAYRYKLNKSYGDYINNLLGSSQREQPKKFWRFVKSKR--QDNMGINLLYNQHNIAVSN 145 Query: 414 TTDSGDVICNLFCEYFQSNFLNTA 485 + D +V+ F F +TA Sbjct: 146 SLDKANVLNGYFFSIFTKEESSTA 169 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,637,414 Number of Sequences: 59808 Number of extensions: 330338 Number of successful extensions: 863 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 747 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 862 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1596754500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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