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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0558
         (636 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2306| Best HMM Match : MecA_N (HMM E-Value=2.3)                     42   4e-04
SB_58595| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.002
SB_6954| Best HMM Match : RVT_1 (HMM E-Value=0)                        38   0.007
SB_54400| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.028
SB_3879| Best HMM Match : No HMM Matches (HMM E-Value=.)               35   0.064
SB_2139| Best HMM Match : No HMM Matches (HMM E-Value=.)               34   0.11 
SB_34598| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.11 
SB_34486| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.11 
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.11 
SB_56875| Best HMM Match : LON (HMM E-Value=0)                         33   0.15 
SB_41990| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05)         33   0.15 
SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0)                       33   0.15 
SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.15 
SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.26 
SB_6009| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.45 
SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.78 
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.0  
SB_17675| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.0  
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)                    31   1.0  
SB_58227| Best HMM Match : HSBP1 (HMM E-Value=0.28)                    31   1.0  
SB_53753| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_24162| Best HMM Match : RVT_1 (HMM E-Value=0)                       30   1.4  
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)                   30   1.4  
SB_10781| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_57858| Best HMM Match : RNA_pol_A_CTD (HMM E-Value=5.7)             30   1.8  
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)                      30   1.8  
SB_9604| Best HMM Match : Cbl_N3 (HMM E-Value=1.2)                     29   2.4  
SB_28749| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.2  
SB_21074| Best HMM Match : NadA (HMM E-Value=2)                        29   4.2  
SB_23712| Best HMM Match : HSBP1 (HMM E-Value=0.35)                    28   5.5  
SB_58944| Best HMM Match : fn3 (HMM E-Value=0.88)                      28   5.5  
SB_49186| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.3  
SB_21205| Best HMM Match : Ribosomal_L30_N (HMM E-Value=0.75)          28   7.3  
SB_10854| Best HMM Match : Hormone_4 (HMM E-Value=8.4)                 28   7.3  
SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.3  
SB_35523| Best HMM Match : RVT_1 (HMM E-Value=0)                       28   7.3  
SB_24072| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.3  
SB_20293| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.3  
SB_900| Best HMM Match : Plasmodium_HRP (HMM E-Value=2.1)              27   9.7  
SB_49847| Best HMM Match : VAR1 (HMM E-Value=5.2)                      27   9.7  

>SB_2306| Best HMM Match : MecA_N (HMM E-Value=2.3)
          Length = 262

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 21/73 (28%), Positives = 35/73 (47%)
 Frame = +3

Query: 255 RKRAKILEDDCYRAYIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDV 434
           R+  K L    ++ Y+  +  S+  +PK FW + +  K  +N++P T+ Y G    S D 
Sbjct: 25  RRECKTLIAAKHKLYVEGLSQSLKSNPKKFWSYFRA-KTKSNSIPDTVLYNGSKFYSPDE 83

Query: 435 ICNLFCEYFQSNF 473
               F  +F S F
Sbjct: 84  KAEAFNRFFFSTF 96


>SB_58595| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1462

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 20/73 (27%), Positives = 35/73 (47%)
 Frame = +3

Query: 255 RKRAKILEDDCYRAYIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDV 434
           R+  K L    ++ Y+  +  S+  +PK FW + +  K  +N++P T+T+ G    S D 
Sbjct: 409 RRECKTLIAAKHKLYVEGLSQSLKSNPKKFWSYFRA-KTKSNSIPDTVTHNGSKFYSPDE 467

Query: 435 ICNLFCEYFQSNF 473
                  +F S F
Sbjct: 468 KAEALNRFFFSTF 480


>SB_6954| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 943

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +3

Query: 288 YRAYIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQS 467
           ++ Y+  +  S+  +PK FW + +  K  +N++P T+T+ G    S D        +F S
Sbjct: 12  HKLYVEGLSQSLKSNPKKFWSYFRA-KTKSNSIPDTVTHNGSKFYSPDEKAEALNRFFFS 70

Query: 468 NF 473
            F
Sbjct: 71  TF 72


>SB_54400| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 723

 Score = 35.9 bits (79), Expect = 0.028
 Identities = 16/64 (25%), Positives = 32/64 (50%)
 Frame = +3

Query: 297 YIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNFL 476
           YI ++   I  +PK FWRF+++ K  + ++P      G+  +S      +  ++F+ N  
Sbjct: 375 YINNMIGDIKSNPKPFWRFIRSQKKDSQSMPPLKATNGRLVESDIGKSEMLNQHFRENLS 434

Query: 477 NTAT 488
           +  T
Sbjct: 435 DEDT 438


>SB_3879| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 693

 Score = 34.7 bits (76), Expect = 0.064
 Identities = 14/64 (21%), Positives = 32/64 (50%)
 Frame = +3

Query: 297 YIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNFL 476
           YI ++   +  +PK FW F+++ +  + ++P      G+  +S      +  ++F+ NF 
Sbjct: 599 YINNMIGDVKSNPKPFWHFIRSQRKDSQSMPPLKATNGRLVESDIGKSEMLNQHFRENFS 658

Query: 477 NTAT 488
           +  T
Sbjct: 659 DEDT 662


>SB_2139| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 296

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = +3

Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNF 473
           V  S++ +PK FW +VK+ +   +++PS  + +G +    D    +  + FQS F
Sbjct: 99  VGGSLVSNPKKFWNYVKSRRSEVSDIPSLRSNDGVSISPRDK-AQVLNKQFQSVF 152


>SB_34598| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 306

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +3

Query: 297 YIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNF 473
           Y+ S+   I  +PK FW+F+++ +    ++PS  T       S      +    FQ NF
Sbjct: 41  YVNSIIGDIKTNPKPFWKFIRSQRKDDQSMPSLKTPSRTLAKSDMKKAEILNHQFQRNF 99


>SB_34486| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 203

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = +3

Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNF 473
           V  S++ +PK FW +VK+ +   +++PS  + +G +    D    +  + FQS F
Sbjct: 41  VGGSLVSNPKKFWNYVKSRRSEVSDIPSLRSNDGVSISPRDK-AQVLNKQFQSVF 94


>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 788

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = +3

Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNF 473
           V  S++ +PK FW +VK+ +   +++PS  + +G +    D    +  + FQS F
Sbjct: 23  VGGSLVSNPKKFWNYVKSRRSEVSDIPSLRSNDGVSISPRDK-AQVLNKQFQSVF 76


>SB_56875| Best HMM Match : LON (HMM E-Value=0)
          Length = 925

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 13/64 (20%), Positives = 34/64 (53%)
 Frame = +3

Query: 297  YIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNFL 476
            YI ++  ++  +PK FW+F+++ +  + ++P      G+  +S      +  ++F+ +F 
Sbjct: 841  YINNMIGNVKSNPKPFWQFIRSQRKDSQSMPPLKATNGRLVESDIGKSEMLNQHFRDSFS 900

Query: 477  NTAT 488
            +  T
Sbjct: 901  DEDT 904


>SB_41990| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05)
          Length = 455

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 13/64 (20%), Positives = 34/64 (53%)
 Frame = +3

Query: 297 YIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNFL 476
           YI ++  ++  +PK FW+F+++ +  + ++P      G+  +S      +  ++F+ +F 
Sbjct: 371 YINNMIGNVKSNPKPFWQFIRSQRKDSQSMPPLKATNGRLVESDIGKSEMLNQHFRDSFS 430

Query: 477 NTAT 488
           +  T
Sbjct: 431 DEDT 434


>SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 931

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = +3

Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNF 473
           V  S++ +PK FW +VK+ +   +++PS  + +G +    D    +  + FQS F
Sbjct: 313 VGGSLVSNPKKFWNYVKSRRSEVSDIPSLRSNDGISISPRDK-AQVLNKQFQSVF 366


>SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2124

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = +3

Query: 309  VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNF 473
            V  S++ +PK FW +VK+ +   +++PS  + +G +    D    +  + FQS F
Sbjct: 1703 VGGSLVSNPKKFWNYVKSRRSEVSDIPSLRSNDGISISPRDK-AQVLNKQFQSVF 1756


>SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2529

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +3

Query: 309  VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGD 431
            V  S++ +PK FW +VK+ +   +++PS  + +G +    D
Sbjct: 1044 VGGSLVSNPKKFWNYVKSRRSEVSDIPSLRSNDGVSISPRD 1084


>SB_6009| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 895

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = +3

Query: 267 KILEDDCYRAYIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNL 446
           KI + D Y   ++  +S + K  +     +   + S ++LPST  + G+       I N 
Sbjct: 599 KIAKRDYYDKKLSEYKSDVKKTWRILNEVINRRQ-SNSSLPSTFKFAGREVGDPMEIANG 657

Query: 447 FCEYF 461
           FC+YF
Sbjct: 658 FCDYF 662


>SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1360

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
 Frame = +3

Query: 264 AKILEDDCYRAYIASVESSILKD-PKFFWRFVKTNKGSANNLPSTLTYEG--QTTDS--G 428
           +K+++D  +  Y+ ++  + LKD PK FW +V+++K  +  +P     +     TD+   
Sbjct: 517 SKLIKDS-HNDYLNNIIGNSLKDNPKKFWSYVRSSKSESIGIPPLKNNDSSVSVTDAHKA 575

Query: 429 DVICNLFCEYFQSNFLNTATADHS 500
           + + N F   F    L T    +S
Sbjct: 576 ETLNNFFHSVFTQEQLPTPVLGNS 599


>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 591

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +3

Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDV 434
           +  S+  DPK FWR+VK ++     +P   T +  T+D+G +
Sbjct: 273 IGESLQSDPKKFWRYVKRSRSENVGIP---TLQRFTSDNGQL 311


>SB_17675| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 228

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -2

Query: 464 LEVFTKKITDNVPRVSCLSFVCESRRKVICATFVSFNKSPE 342
           +E   K +  N PR   LS +C+S  +V   +FVSF K PE
Sbjct: 148 IEKRCKSMNPNYPRDK-LSSICDSESRVCEKSFVSFAKLPE 187


>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
          Length = 339

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +3

Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDV 434
           +  S+  DPK FWR+VK ++     +P   T +  T+D+G +
Sbjct: 114 IGESLQSDPKKFWRYVKRSRSENVGIP---TLQRFTSDNGQL 152


>SB_58227| Best HMM Match : HSBP1 (HMM E-Value=0.28)
          Length = 565

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +3

Query: 267 KILEDDCYRAYIASVESSILKDPKFFWRFVKT--NKGSANN-LPSTLTYEGQTTDSGDVI 437
           KI + D Y   ++  +S + K     WR +    N+  +N+ LPST    G+       I
Sbjct: 374 KIAKRDYYDKKLSEYKSDVKKT----WRILNEVINRRQSNSRLPSTFKVAGREVSDPMEI 429

Query: 438 CNLFCEYF 461
            N FC+YF
Sbjct: 430 ANGFCDYF 437


>SB_53753| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 252

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 264 AKILEDDCYRAYIASVESSILKD-PKFFWRFVKTNKGSANNLP 389
           +K+++D  +  Y+ ++  + LKD PK FW +V+++K  +  +P
Sbjct: 31  SKLIKDS-HNDYLNNIIGNSLKDNPKKFWSYVRSSKSESIGIP 72


>SB_24162| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 801

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 264 AKILEDDCYRAYIASVESSILKD-PKFFWRFVKTNKGSANNLP 389
           +K+++D  +  Y+ ++  + LKD PK FW +V+++K  +  +P
Sbjct: 234 SKLIKDS-HNDYLNNIIGNSLKDNPKKFWSYVRSSKSESIGIP 275


>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 274

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 61  CFIFAKPLKSVLLSLNCIVESIMLLVCSHPGTHP 162
           C + AKP++  LLS++CI   +   + S   THP
Sbjct: 239 CRVVAKPVEDNLLSIDCIAYEVTFGLRSRFATHP 272


>SB_10781| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 457

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 264 AKILEDDCYRAYIASVESSILKD-PKFFWRFVKTNKGSANNLP 389
           +K+++D  +  Y+ ++  + LKD PK FW +V+++K  +  +P
Sbjct: 31  SKLIKDS-HNDYLNNIIGNSLKDNPKKFWSYVRSSKSESIGIP 72


>SB_57858| Best HMM Match : RNA_pol_A_CTD (HMM E-Value=5.7)
          Length = 280

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
 Frame = +3

Query: 255 RKRAKILEDDCYRAYIASVESSILKD-PKFFWRFVKTNKGSANNLPSTLTYEGQTTDS-- 425
           +K  KI        YIA   +S LK+ PK FW ++K+ +     +P    +    TDS  
Sbjct: 35  QKLFKIKMKKAQDEYIADTLNSDLKEKPKKFWSYIKSKRQDQVGVPPLKEHGIVKTDSMS 94

Query: 426 -GDVICNLFCEYF 461
             +++ N F + F
Sbjct: 95  KAEILSNQFQQVF 107


>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
          Length = 272

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +3

Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQSNF 473
           +  S+  DPK FWR+VK ++     +P TL  +     S          +FQS F
Sbjct: 56  IRESLQSDPKKFWRYVKRSRSENVGIP-TLRKDNMLFISDADKAEALNHHFQSVF 109


>SB_9604| Best HMM Match : Cbl_N3 (HMM E-Value=1.2)
          Length = 317

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
 Frame = +3

Query: 336 KFFWRF----VKTNKGSANNLPSTLTYEGQTTDSGDVICNLFCEYFQS 467
           K+ WR     +   K   N+LPST             I N FC+YF S
Sbjct: 21  KYTWRILNEVINNCKSKTNSLPSTFKVADSKISDPVKIANDFCDYFTS 68


>SB_28749| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 196

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/43 (27%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 264 AKILEDDCYRAYIASVESSILKD-PKFFWRFVKTNKGSANNLP 389
           +K+++D  +  Y+ ++  + LKD PK FW +++++K  +  +P
Sbjct: 31  SKLIKDS-HNDYLNNIIGNSLKDNPKKFWSYLRSSKSESIGIP 72


>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
          Length = 358

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 309 VESSILKDPKFFWRFVKTNKGSANNLPS 392
           +  S+  DPK FWR+VK ++     +P+
Sbjct: 114 IGESLQSDPKKFWRYVKRSRSENVGIPT 141


>SB_23712| Best HMM Match : HSBP1 (HMM E-Value=0.35)
          Length = 437

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = +3

Query: 291 RAYIASVESSILKDPKFFWRFVKT--NKGSANN-LPSTLTYEGQTTDSGDVICNLFCEYF 461
           R Y     S    + K  WR +    N+  +N+ LPST    G+       I N FC+YF
Sbjct: 316 RDYYDKKLSEYKSNVKKTWRILNEVINRRQSNSRLPSTFKVAGREVSDPMEIANGFCDYF 375


>SB_58944| Best HMM Match : fn3 (HMM E-Value=0.88)
          Length = 697

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 14/99 (14%)
 Frame = +3

Query: 249 SPRKRAKILEDDCYRAYIASVESSILKDPKFFWRFVKTNKGSANNLPSTLTYEG------ 410
           S R++ K L +     +  S+E     + K FW  +K  K  +  LPS ++         
Sbjct: 150 SLREKFKALRES-RENFFQSLERDYKNNTKRFWSVLK-QKSKSRGLPSHVSMATVNPPTG 207

Query: 411 --------QTTDSGDVICNLFCEYFQSNFLNTATADHST 503
                    T D  + I NLF +YF S FL  +  D +T
Sbjct: 208 SQDPTPLRTTADDPEAIANLFNKYFASVFLKDSLQDLNT 246


>SB_49186| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1776

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = -2

Query: 461 EVFTKKITDNVPRVSC---LSFVCESRRKVICATFVSF 357
           E+FT+   +   R  C   + ++CE+  +VIC  F S+
Sbjct: 256 ELFTRSFCELFTRSFCGLFIRYICEAFTRVICEAFTSY 293


>SB_21205| Best HMM Match : Ribosomal_L30_N (HMM E-Value=0.75)
          Length = 505

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 414 TTDSGDVICNLFCEYFQSNFLNTATADHST 503
           T D  + I NLF +YF S FL  +  D +T
Sbjct: 365 TADDPEAIANLFNKYFASVFLKDSLQDLNT 394


>SB_10854| Best HMM Match : Hormone_4 (HMM E-Value=8.4)
          Length = 217

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 414 TTDSGDVICNLFCEYFQSNFLNTATADHST 503
           T D  + I NLF +YF S FL  +  D +T
Sbjct: 19  TADDPEAIANLFNKYFASVFLKDSLQDLNT 48


>SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1480

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 414  TTDSGDVICNLFCEYFQSNFLNTATADHST 503
            T D  + I NLF +YF S FL  +  D +T
Sbjct: 1334 TADDPEAIANLFNKYFASVFLKDSLQDLNT 1363


>SB_35523| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 1410

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 414 TTDSGDVICNLFCEYFQSNFLNTATADHST 503
           T D  + I NLF +YF S FL  +  D +T
Sbjct: 372 TADDPEAIANLFNKYFASVFLKDSLQDLNT 401


>SB_24072| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 822

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
 Frame = +3

Query: 255 RKRAKILEDDCYRAYIASVESSILKDPKFFWRFVK---TNKGSANNLPSTLTYEGQTTDS 425
           R+ AK +     + +   +ES I  +PK FW +VK   +NK S N       +   T + 
Sbjct: 317 RRAAKQMLSKKKKEHAEKLESVISDNPKRFWGYVKSCTSNKPSPNFFRDGHAFVTYTKN- 375

Query: 426 GDVICNLFCEYFQSNFLNTATADHSTA 506
              + NL   YF   F  +A+ +  +A
Sbjct: 376 ---MANLLNRYFNYIFSPSASEEFVSA 399


>SB_20293| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1821

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 414 TTDSGDVICNLFCEYFQSNFLNTATADHST 503
           T D  + I NLF +YF S FL  +  D +T
Sbjct: 320 TADDPEAIANLFNKYFASVFLKDSLQDLNT 349


>SB_900| Best HMM Match : Plasmodium_HRP (HMM E-Value=2.1)
          Length = 249

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 450 CEYFQSNFLNTATAD-HSTADNSWVLIQTLHTLT 548
           C +  ++ L T   D H+TADN W    T+H  T
Sbjct: 198 CAHNDTHTLCTIPVDVHATADNDWRHAHTIHITT 231


>SB_49847| Best HMM Match : VAR1 (HMM E-Value=5.2)
          Length = 254

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
 Frame = +3

Query: 255 RKRAKILEDDCYRAYIASV-ESSILKDPKFFWRFVKTNKGSANNLPSTLTYE------GQ 413
           RK  +   +  Y  YI ++  SS  + PK FWRFVK+ +   +N+   L Y         
Sbjct: 88  RKAYRYKLNKSYGDYINNLLGSSQREQPKKFWRFVKSKR--QDNMGINLLYNQHNIAVSN 145

Query: 414 TTDSGDVICNLFCEYFQSNFLNTA 485
           + D  +V+   F   F     +TA
Sbjct: 146 SLDKANVLNGYFFSIFTKEESSTA 169


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,637,414
Number of Sequences: 59808
Number of extensions: 330338
Number of successful extensions: 863
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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