Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0558
         (636 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB209869-1|BAD93106.1| 1006|Homo sapiens endoplasmic reticulum t...    30   7.9  

>AB209869-1|BAD93106.1| 1006|Homo sapiens endoplasmic reticulum to
           nucleus signalling 1 isoform 1 variant protein.
          Length = 1006

 Score = 29.9 bits (64), Expect = 7.9
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = -3

Query: 427 PESVVCPSYVRVEGRLFALP----LLVLTNLQKNLGSF 326
           P  V+CP   R +GR+ A+P    LL+LT L   LG F
Sbjct: 12  PRPVLCPYRPRSQGRVLAMPARRLLLLLTLLLPGLGIF 49


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,563,489
Number of Sequences: 237096
Number of extensions: 1550597
Number of successful extensions: 2485
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2485
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)