Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0556
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.47 
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   3.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   5.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   5.8  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   5.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.7  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 325 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 420
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 294 PDPQIPHRTRNRH 332
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 363 MPNLLHVIPVSDDSVFD 313
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 363 MPNLLHVIPVSDDSVFD 313
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 363 MPNLLHVIPVSDDSVFD 313
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 363 MPNLLHVIPVSDDSVFD 313
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 172 PPAKPALHIPEPLSTTRRGNFIRR 101
           PP   A  +P PL    R  F R+
Sbjct: 220 PPGNTAAALPSPLYPWMRSQFERK 243


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -1

Query: 330 DDSVFDGVFEGQDTSFAHVPHLLHKILLSHTDH 232
           DD +  G  +G   +  + PH+ H+  L    H
Sbjct: 9   DDGIHPGYMDGGAGAGLYEPHVAHRPGLQGLHH 41


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 172 PPAKPALHIPEPLSTTRRGNFIRR 101
           PP   A  +P PL    R  F R+
Sbjct: 222 PPGNTAAALPSPLYPWMRSQFERK 245


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 150 CKAGFAGG*CSSR 188
           CK GF G  C +R
Sbjct: 49  CKPGFTGSNCQNR 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,256
Number of Sequences: 336
Number of extensions: 3585
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)