Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0556
(588 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 253 8e-68
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 253 8e-68
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 252 1e-67
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 252 1e-67
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 252 1e-67
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 252 1e-67
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 252 1e-67
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 252 1e-67
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 252 1e-67
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 252 2e-67
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 209 1e-54
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 160 6e-40
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 121 3e-28
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 114 4e-26
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 114 4e-26
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 114 4e-26
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 109 2e-24
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 96 1e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 85 4e-17
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 40 0.001
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 40 0.001
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 38 0.004
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 37 0.012
AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophi... 29 2.4
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 28 5.7
U12966-3|AAA20614.1| 128|Caenorhabditis elegans Temporarily ass... 28 5.7
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 27 7.5
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 27 7.5
AL034391-1|CAA22302.2| 333|Caenorhabditis elegans Hypothetical ... 27 7.5
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 27 7.5
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 27 7.5
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 9.9
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 9.9
U42844-7|AAB53819.1| 331|Caenorhabditis elegans Skn-1 dependent... 27 9.9
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 9.9
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 9.9
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 9.9
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 9.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 253 bits (619), Expect = 8e-68
Identities = 119/131 (90%), Positives = 120/131 (91%)
Frame = +1
Query: 172 DDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDME 351
DDAPRAVFPSIVGRPRHQGVMVGMGQKD SKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 352 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYCRLQAVLSLY 531
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY +QAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 532 AFGRTTGIVLD 564
A GRTTGIVLD
Sbjct: 145 ASGRTTGIVLD 155
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/55 (49%), Positives = 31/55 (56%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGG*CSSRRVPLDRGKAPPSGRDGRYGTEGSYVGDEAHEQK 287
LVVDNGSGMCKAGFAG P G+ G G + SYVGDEA ++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 253 bits (619), Expect = 8e-68
Identities = 119/131 (90%), Positives = 120/131 (91%)
Frame = +1
Query: 172 DDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDME 351
DDAPRAVFPSIVGRPRHQGVMVGMGQKD SKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 352 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYCRLQAVLSLY 531
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY +QAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 532 AFGRTTGIVLD 564
A GRTTGIVLD
Sbjct: 145 ASGRTTGIVLD 155
Score = 48.0 bits (109), Expect = 5e-06
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGG*CSSRRVPLDRGKAPPSGRDGRYGTEGSYVGDEAHEQK 287
L++DNGSGMCKAGFAG P G+ G G + SYVGDEA ++
Sbjct: 9 LILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 252 bits (618), Expect = 1e-67
Identities = 118/131 (90%), Positives = 120/131 (91%)
Frame = +1
Query: 172 DDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDME 351
DDAPRAVFPSIVGRPRHQGVMVGMGQKD SKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 352 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYCRLQAVLSLY 531
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY +QAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 532 AFGRTTGIVLD 564
A GRTTG+VLD
Sbjct: 145 ASGRTTGVVLD 155
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/55 (49%), Positives = 31/55 (56%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGG*CSSRRVPLDRGKAPPSGRDGRYGTEGSYVGDEAHEQK 287
LVVDNGSGMCKAGFAG P G+ G G + SYVGDEA ++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 252 bits (618), Expect = 1e-67
Identities = 118/131 (90%), Positives = 120/131 (91%)
Frame = +1
Query: 172 DDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDME 351
DDAPRAVFPSIVGRPRHQGVMVGMGQKD SKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 352 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYCRLQAVLSLY 531
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY +QAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 532 AFGRTTGIVLD 564
A GRTTG+VLD
Sbjct: 145 ASGRTTGVVLD 155
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/55 (49%), Positives = 31/55 (56%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGG*CSSRRVPLDRGKAPPSGRDGRYGTEGSYVGDEAHEQK 287
LVVDNGSGMCKAGFAG P G+ G G + SYVGDEA ++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 252 bits (618), Expect = 1e-67
Identities = 118/131 (90%), Positives = 120/131 (91%)
Frame = +1
Query: 172 DDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDME 351
DDAPRAVFPSIVGRPRHQGVMVGMGQKD SKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 352 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYCRLQAVLSLY 531
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY +QAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 532 AFGRTTGIVLD 564
A GRTTG+VLD
Sbjct: 145 ASGRTTGVVLD 155
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/55 (49%), Positives = 31/55 (56%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGG*CSSRRVPLDRGKAPPSGRDGRYGTEGSYVGDEAHEQK 287
LVVDNGSGMCKAGFAG P G+ G G + SYVGDEA ++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 252 bits (618), Expect = 1e-67
Identities = 118/131 (90%), Positives = 120/131 (91%)
Frame = +1
Query: 172 DDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDME 351
DDAPRAVFPSIVGRPRHQGVMVGMGQKD SKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 352 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYCRLQAVLSLY 531
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY +QAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 532 AFGRTTGIVLD 564
A GRTTG+VLD
Sbjct: 145 ASGRTTGVVLD 155
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/55 (49%), Positives = 31/55 (56%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGG*CSSRRVPLDRGKAPPSGRDGRYGTEGSYVGDEAHEQK 287
LVVDNGSGMCKAGFAG P G+ G G + SYVGDEA ++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 252 bits (618), Expect = 1e-67
Identities = 118/131 (90%), Positives = 120/131 (91%)
Frame = +1
Query: 172 DDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDME 351
DDAPRAVFPSIVGRPRHQGVMVGMGQKD SKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 352 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYCRLQAVLSLY 531
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY +QAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 532 AFGRTTGIVLD 564
A GRTTG+VLD
Sbjct: 145 ASGRTTGVVLD 155
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/55 (49%), Positives = 31/55 (56%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGG*CSSRRVPLDRGKAPPSGRDGRYGTEGSYVGDEAHEQK 287
LVVDNGSGMCKAGFAG P G+ G G + SYVGDEA ++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 252 bits (618), Expect = 1e-67
Identities = 118/131 (90%), Positives = 120/131 (91%)
Frame = +1
Query: 172 DDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDME 351
DDAPRAVFPSIVGRPRHQGVMVGMGQKD SKRGILTLKYPIEHGIVTNWDDME
Sbjct: 11 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 70
Query: 352 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYCRLQAVLSLY 531
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY +QAVLSLY
Sbjct: 71 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 130
Query: 532 AFGRTTGIVLD 564
A GRTTG+VLD
Sbjct: 131 ASGRTTGVVLD 141
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 252 bits (618), Expect = 1e-67
Identities = 118/131 (90%), Positives = 120/131 (91%)
Frame = +1
Query: 172 DDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDME 351
DDAPRAVFPSIVGRPRHQGVMVGMGQKD SKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 352 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYCRLQAVLSLY 531
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY +QAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 532 AFGRTTGIVLD 564
A GRTTG+VLD
Sbjct: 145 ASGRTTGVVLD 155
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/55 (49%), Positives = 31/55 (56%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGG*CSSRRVPLDRGKAPPSGRDGRYGTEGSYVGDEAHEQK 287
LVVDNGSGMCKAGFAG P G+ G G + SYVGDEA ++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 252 bits (616), Expect = 2e-67
Identities = 117/131 (89%), Positives = 120/131 (91%)
Frame = +1
Query: 172 DDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDME 351
DDAPRAVFPSIVGRPRHQGVMVGMGQKD SKRGILTLKYPIEHGIVTNWDDME
Sbjct: 24 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 83
Query: 352 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYCRLQAVLSLY 531
KIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFETFNTPAMY +QAVLSLY
Sbjct: 84 KIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLY 143
Query: 532 AFGRTTGIVLD 564
A GRTTGIVLD
Sbjct: 144 ASGRTTGIVLD 154
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/59 (45%), Positives = 33/59 (55%)
Frame = +3
Query: 111 KLPRLVVDNGSGMCKAGFAGG*CSSRRVPLDRGKAPPSGRDGRYGTEGSYVGDEAHEQK 287
++ LVVDNGSGMCKAGFAG P G+ G G + SYVGDEA ++
Sbjct: 4 EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 62
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 209 bits (511), Expect = 1e-54
Identities = 98/111 (88%), Positives = 100/111 (90%)
Frame = +1
Query: 232 MVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 411
MVGMGQKD SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 412 LLTEAPLNPKANREKMTQIMFETFNTPAMYCRLQAVLSLYAFGRTTGIVLD 564
LLTEAPLNPKANREKMTQIMFETFNTPAMY +QAVLSLYA GRTTG+VLD
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLD 111
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 160 bits (389), Expect = 6e-40
Identities = 72/132 (54%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Frame = +1
Query: 172 DDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDME 351
+ P+ F + VGRP++ VM G D+ + S RG+ +++YP+EHGIV NW DME
Sbjct: 27 EQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDME 86
Query: 352 KIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYCRLQAVLSL 528
KIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FETFN PA+Y ++QAVLSL
Sbjct: 87 KIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSL 146
Query: 529 YAFGRTTGIVLD 564
YA GRTTG+VLD
Sbjct: 147 YATGRTTGVVLD 158
Score = 31.1 bits (67), Expect = 0.61
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAG 170
+V+DNGSG+ KAGFAG
Sbjct: 11 VVIDNGSGVIKAGFAG 26
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 121 bits (292), Expect = 3e-28
Identities = 64/131 (48%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Frame = +1
Query: 181 PRAVFPSIVGRPRHQGVM-VGMGQ-KDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDMEK 354
P +FPS+VGRP + VG + KDLM R +L + YP+++GIV NWDDM
Sbjct: 28 PAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAH 87
Query: 355 IWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYCRLQAVLSLY 531
+W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE + ++Y +QAVL+LY
Sbjct: 88 VWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLY 147
Query: 532 AFGRTTGIVLD 564
A G TG+V+D
Sbjct: 148 AQGLLTGVVVD 158
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGG*CSSRRVP--LDRGKAPPSGRDGRYGTEGSYVGDEAHEQKRYP 296
+VVDNG+G K G+AG + P + R + R G + VG+E + ++
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 297 DPQIP 311
D P
Sbjct: 69 DINYP 73
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 114 bits (275), Expect = 4e-26
Identities = 54/62 (87%), Positives = 54/62 (87%)
Frame = +1
Query: 172 DDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDME 351
DDAPRAVFPSIVGRPRHQGVMVGMGQKD SKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 352 KI 357
KI
Sbjct: 85 KI 86
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/55 (49%), Positives = 31/55 (56%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGG*CSSRRVPLDRGKAPPSGRDGRYGTEGSYVGDEAHEQK 287
LVVDNGSGMCKAGFAG P G+ G G + SYVGDEA ++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 114 bits (275), Expect = 4e-26
Identities = 54/62 (87%), Positives = 54/62 (87%)
Frame = +1
Query: 172 DDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDME 351
DDAPRAVFPSIVGRPRHQGVMVGMGQKD SKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 352 KI 357
KI
Sbjct: 85 KI 86
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/55 (49%), Positives = 31/55 (56%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGG*CSSRRVPLDRGKAPPSGRDGRYGTEGSYVGDEAHEQK 287
LVVDNGSGMCKAGFAG P G+ G G + SYVGDEA ++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 114 bits (275), Expect = 4e-26
Identities = 54/62 (87%), Positives = 54/62 (87%)
Frame = +1
Query: 172 DDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDME 351
DDAPRAVFPSIVGRPRHQGVMVGMGQKD SKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 352 KI 357
KI
Sbjct: 85 KI 86
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/55 (49%), Positives = 31/55 (56%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGG*CSSRRVPLDRGKAPPSGRDGRYGTEGSYVGDEAHEQK 287
LVVDNGSGMCKAGFAG P G+ G G + SYVGDEA ++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 109 bits (261), Expect = 2e-24
Identities = 51/59 (86%), Positives = 51/59 (86%)
Frame = +1
Query: 172 DDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDM 348
DDAPRAVFPSIVGRPRHQGVMVGMGQKD SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/55 (49%), Positives = 31/55 (56%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGG*CSSRRVPLDRGKAPPSGRDGRYGTEGSYVGDEAHEQK 287
LVVDNGSGMCKAGFAG P G+ G G + SYVGDEA ++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 96.3 bits (229), Expect = 1e-20
Identities = 43/79 (54%), Positives = 53/79 (67%)
Frame = +1
Query: 298 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 477
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 478 TFNTPAMYCRLQAVLSLYA 534
+FN P +Y +QAVL+L A
Sbjct: 140 SFNVPGLYIAVQAVLALTA 158
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 111 KLPRLVVDNGSGMCKAGFAG 170
+LP V+DNG+G K G+AG
Sbjct: 5 QLPACVIDNGTGYTKLGYAG 24
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 85.0 bits (201), Expect = 4e-17
Identities = 38/84 (45%), Positives = 55/84 (65%)
Frame = +1
Query: 313 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 492
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 493 AMYCRLQAVLSLYAFGRTTGIVLD 564
A Y VLS +A GRT G+++D
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVD 177
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/83 (36%), Positives = 34/83 (40%)
Frame = +3
Query: 195 PLDRGKAPPSGRDGRYGTEGSYVGDEAHEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLL 374
P G A P+G DG GT G D + YP+P P G G D AS
Sbjct: 189 PGPSGPAGPAGNDGAAGTPGP---DGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTA 245
Query: 375 Q*AACRPRGTPSPAH*GSPQPQG 443
A P G P PA G+P P G
Sbjct: 246 APGAAGPPGPPGPA--GAPGPDG 266
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/105 (28%), Positives = 48/105 (45%)
Frame = +1
Query: 169 EDDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDM 348
+ ++PR V SIV + +H+ V + E S + L PIE G V NWD
Sbjct: 21 DSESPRLVPNSIV-KAKHEKKRVFVAH-----EQEECSDKFSLFYVRPIERGYVVNWDTQ 74
Query: 349 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 483
++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 75 QQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/105 (28%), Positives = 48/105 (45%)
Frame = +1
Query: 169 EDDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSKRGILTLKYPIEHGIVTNWDDM 348
+ ++PR V SIV + +H+ V + E S + L PIE G V NWD
Sbjct: 21 DSESPRLVPNSIV-KAKHEKKRVFVAH-----EQEECSDKFSLFYVRPIERGYVVNWDTQ 74
Query: 349 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 483
++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 75 QQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 38.3 bits (85), Expect = 0.004
Identities = 29/79 (36%), Positives = 33/79 (41%)
Frame = +3
Query: 207 GKAPPSGRDGRYGTEGSYVGDEAHEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 386
G A P+G DG GT G D + YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPGP---DGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 387 CRPRGTPSPAH*GSPQPQG 443
P G P PA G+P P G
Sbjct: 251 AGPPGPPGPA--GAPGPDG 267
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 36.7 bits (81), Expect = 0.012
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
Frame = +1
Query: 160 VSQEDDAPRAVFPSIVGRPRHQGVMVGMGQKDLM*EMRHMSK--RGILTLKYPIEHGIVT 333
++ E P++ FP+I R + VG + E+RH R I +E +
Sbjct: 195 LTTEPSLPQSFFPAIAVRTDDGKIFVG--EDAYRPEIRHNGDFVRPISATDPSVERYSID 252
Query: 334 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYCRLQ 513
D+ K EL+V P ++ VLL+ P ++ QI E + Q
Sbjct: 253 K--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQ 310
Query: 514 AVLSLYAFGRTTGIVLDL 567
L LYA+ TTG+V+D+
Sbjct: 311 PSLILYAYDVTTGVVVDI 328
>AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophila
vasa intronic gene)ortholog protein 1, isoform a
protein.
Length = 378
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 201 DRGKAPPSGRDGRYG-TEGSYVGDEAHEQKRYPDPQIPHRTRNR 329
+RG A P+GR GR G T + G+E ++ + D Q R R
Sbjct: 113 ERGAARPAGRGGRGGFTRENREGEEPKQEVSFEDGQDTRAPRRR 156
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = -2
Query: 362 CQIFSMSSQLVTIPC-SMGYLRVRIPLLLMCLISYIRSFCPIPTITP*WRGLPTIEGNT 189
CQ+FS QLVT+ SMG +++++ + + L++ S PTI P P I+G T
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSS--TKPTIAP---NPPEIDGTT 304
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 204 RGKAPPSGRDGRYGTEGS 257
RGKA +GRDGR G EG+
Sbjct: 216 RGKAGHTGRDGRPGLEGT 233
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +3
Query: 201 DRGKAPPS--GRDGRYGTEGSYVGDEAHEQ 284
D G P G +GR G G YV EAH +
Sbjct: 101 DGGPGQPGLIGLNGRNGRNGKYVASEAHNE 130
>U12966-3|AAA20614.1| 128|Caenorhabditis elegans Temporarily
assigned gene nameprotein 174 protein.
Length = 128
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -1
Query: 282 AHVPHLLHKILLSHTDHHALMAGPSHDRGEHGARSIILLRNRPCTYR--SHCLLPDAATS 109
A +P L + + DH M SH+R EH + + +RN+P + +H L + A
Sbjct: 58 ASIPCLALTMYAAFKDHKKHM---SHERPEHVEYAFLNVRNKPFPWSDGNHSLFHNKAEQ 114
Query: 108 FV 103
FV
Sbjct: 115 FV 116
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 274 ASSPT*DPSVPYRPSRPDGGAFPRSRGTRREEHHPPAKPALHIPEP 137
A+ P P P RP RP P + G PPA+P I P
Sbjct: 109 AAGPAGTPGKPGRPGRPGAAGLPGNPG------RPPAQPCEPITPP 148
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 274 ASSPT*DPSVPYRPSRPDGGAFPRSRGTRREEHHPPAKPALHIPEP 137
A+ P P P RP RP P + G PPA+P I P
Sbjct: 109 AAGPAGTPGKPGRPGRPGAAGLPGNPG------RPPAQPCEPITPP 148
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 274 ASSPT*DPSVPYRPSRPDGGAFPRSRGTRREEHHPPAKPALHIPEP 137
A+ P P P RP RP P + G PPA+P I P
Sbjct: 109 AAGPAGTPGKPGRPGRPGAAGLPGNPG------RPPAQPCEPITPP 148
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 274 ASSPT*DPSVPYRPSRPDGGAFPRSRGTRREEHHPPAKPALHIPEP 137
A+ P P P RP RP P + G PPA+P I P
Sbjct: 109 AAGPAGTPGKPGRPGRPGAAGLPGNPG------RPPAQPCEPITPP 148
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 396 RGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVLSPP 512
RG P PAH G P G + P H H PP
Sbjct: 111 RGAPPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHFPGPP 149
>AL034391-1|CAA22302.2| 333|Caenorhabditis elegans Hypothetical
protein Y40H4A.2 protein.
Length = 333
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1
Query: 231 HALMAGPSHDRGEHGARSIILLRNRPCTYRSHCLL 127
H + G DRG G +++LL C Y H L
Sbjct: 107 HYVFLGDYVDRGRQGIETVMLLMAYHCLYPDHLFL 141
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 381 AACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVLSPPSRALAVRVRS 542
AA P TP P+ +P+ + ED+P N+ R V SPP+++ + R+
Sbjct: 1223 AAGTPPPTP-PSVAAMLEPKEELDEDEPSTSTNVPVLRRVNSPPAQSTSYARRN 1275
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +3
Query: 90 IQDVRRMKLPRLVVDNGSGMC-KAGFAGG*CSSRRVPLDRGKAPPSGRDGRYGTEG 254
+ +R + R SG AG AGG CS +P G G+ GR G G
Sbjct: 64 VSSIRSNRTARQASYGDSGAAGSAGAAGGSCSGCCLPGPAGPVGTPGKPGRPGKPG 119
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 307 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 408
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 307 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 408
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>U42844-7|AAB53819.1| 331|Caenorhabditis elegans Skn-1 dependent
zygotic transcriptprotein 2 protein.
Length = 331
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Frame = -1
Query: 330 DDSVFDGVFEGQDTSFAH--VPHLLHKILLS---HTDHHALM 220
DD +FDG+FE + +F H +P + K+ S HTD A M
Sbjct: 174 DDILFDGLFE-VENNFVHNGLPAMEEKVRFSANLHTDEQANM 214
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +3
Query: 384 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ 485
AC GT SPA GSP PQ D + N Q
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1263
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +3
Query: 384 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ 485
AC GT SPA GSP PQ D + N Q
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1276
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +3
Query: 384 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ 485
AC GT SPA GSP PQ D + N Q
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1264
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +3
Query: 384 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ 485
AC GT SPA GSP PQ D + N Q
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1276
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,432,233
Number of Sequences: 27780
Number of extensions: 372368
Number of successful extensions: 1473
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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