Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0553
         (391 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6NHA2 Cluster: Uncharacterized protein ENSP00000355631...    36   0.21 
UniRef50_Q12QB2 Cluster: ABC transporter related precursor; n=1;...    36   0.28 
UniRef50_Q20715 Cluster: Putative uncharacterized protein; n=2; ...    33   2.0  
UniRef50_A1SAC9 Cluster: Putative uncharacterized protein precur...    33   2.6  
UniRef50_Q4YN05 Cluster: Putative uncharacterized protein; n=3; ...    32   4.5  
UniRef50_Q236B0 Cluster: Putative uncharacterized protein; n=1; ...    31   6.0  
UniRef50_A4VCW9 Cluster: Putative uncharacterized protein; n=1; ...    31   6.0  
UniRef50_A7P7M6 Cluster: Chromosome chr9 scaffold_7, whole genom...    31   7.9  
UniRef50_Q55AJ1 Cluster: Putative uncharacterized protein; n=2; ...    31   7.9  
UniRef50_A2DK12 Cluster: Putative uncharacterized protein; n=1; ...    31   7.9  

>UniRef50_A6NHA2 Cluster: Uncharacterized protein ENSP00000355631;
           n=1; Homo sapiens|Rep: Uncharacterized protein
           ENSP00000355631 - Homo sapiens (Human)
          Length = 152

 Score = 36.3 bits (80), Expect = 0.21
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +2

Query: 140 IYSKKHSLKHTDSMYRYYPFSLYFTYT-INLDTSVYYCIYMFKVFSVHICV 289
           IY   H   +T  MY  Y ++  + YT I++   +Y C+Y+ K    HIC+
Sbjct: 39  IYGYIHIYVYT-YMYMLYVYTYMYVYTYISICVHIYVCVYIHKYMCTHICM 88


>UniRef50_Q12QB2 Cluster: ABC transporter related precursor; n=1;
           Shewanella denitrificans OS217|Rep: ABC transporter
           related precursor - Shewanella denitrificans (strain
           OS217 / ATCC BAA-1090 / DSM 15013)
          Length = 301

 Score = 35.9 bits (79), Expect = 0.28
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = +3

Query: 117 TKLSLILLFIAKNIH*NILIQCTDIIHSHFTLPTQLISIPQYIIVYTCLKFFQYIFVSIN 296
           + L  IL  IAK     +L +  DI+ S  TL  +L  +PQY  VY  L  F+++     
Sbjct: 45  SSLMRILATIAKPTSGKVLWRGKDIVQSPQTLRRELGYLPQYFGVYEQLSGFEFLHYIAG 104

Query: 297 LKAL 308
           +KAL
Sbjct: 105 IKAL 108


>UniRef50_Q20715 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 572

 Score = 33.1 bits (72), Expect = 2.0
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +2

Query: 92  SSLIT*LCNKIKFNSIIYSKKHSLKHTDSMYRYYPFSLYFTYTINLDTSVYYC-IYMFKV 268
           S L+  +CN   F  +I+    S+ ++  ++ YYP  L+F Y + L T    C +Y+  +
Sbjct: 126 SDLVLLVCN---FFMLIFPVIASMSNSYLLHDYYPVFLWFAYPVGLSTQT--CGVYLTVL 180

Query: 269 FSVH 280
            SVH
Sbjct: 181 VSVH 184


>UniRef50_A1SAC9 Cluster: Putative uncharacterized protein
           precursor; n=1; Shewanella amazonensis SB2B|Rep:
           Putative uncharacterized protein precursor - Shewanella
           amazonensis (strain ATCC BAA-1098 / SB2B)
          Length = 303

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = +2

Query: 143 YSKKHSLKHTDSMYRYYPFSLYFTYTINL 229
           + +KHSLKH +SM  ++ FSL F  +++L
Sbjct: 4   HQQKHSLKHGNSMRAFFSFSLSFLLSLSL 32


>UniRef50_Q4YN05 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 426

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 113 CNKIKFNSIIYSKKHSLKHTDSM-YRYYPFSLYFTYTINLDTSVYYCIYMFK 265
           CN IK  +++YS   S+ + D M Y  +P  +  T+ +NL+  V   + ++K
Sbjct: 344 CNNIKTLNMLYSYVQSITNKDQMFYDDFPKFVEITFQLNLNKDVENLLCLYK 395


>UniRef50_Q236B0 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 197

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +2

Query: 128 FNSIIYSKKHSLKHTDSMYRY-YPFSLYFTYTINLDTSVYYCIYMFK 265
           F   I      +K+T  M R+ YPF + FT+    +  +Y C+Y+ K
Sbjct: 19  FQKEIQKFLQQIKNTILMNRHQYPFLIRFTFQKQFEMLIYLCVYLSK 65


>UniRef50_A4VCW9 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 192

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 16/60 (26%), Positives = 32/60 (53%)
 Frame = +2

Query: 110 LCNKIKFNSIIYSKKHSLKHTDSMYRYYPFSLYFTYTINLDTSVYYCIYMFKVFSVHICV 289
           L  +++  +I + + H L+ +  + R   FSLY    I ++  +YYC+ M K+  + I +
Sbjct: 118 LFTQVRLGNICF-QIHPLQFSLIIVRMIFFSLYLCCQIEINCWIYYCLIMIKLKIIFIII 176


>UniRef50_A7P7M6 Cluster: Chromosome chr9 scaffold_7, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr9 scaffold_7, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 135

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +2

Query: 197 FSLYFTYTINLDTSVYY-CIYMFKVFSVHICV 289
           FSL + Y   +D  ++Y C + F+VF V++CV
Sbjct: 89  FSLLYQYFDIMDFCLFYLCFFSFRVFHVNLCV 120


>UniRef50_Q55AJ1 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 814

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 131 NSIIYSKKHSLKHTDSMYRYYPFSLYFTYTINLDTSVYYCIYMFKVFS 274
           + I+YSK  S     S+  Y P S YFT +IN     +     F +F+
Sbjct: 590 SGIVYSKVLSQSDASSLPIYIPSSTYFTISINAKNGSFEFASAFNLFN 637


>UniRef50_A2DK12 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 714

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = +2

Query: 116 NKIKFNSIIYSKKHSLKHTDSMYRYYPFSLYFTYTINLDTSVYY 247
           N ++ + II    HSL+++  + +YY FS+  T   N+ +S++Y
Sbjct: 302 NYLRSSLIIKFIDHSLEYSRDLEQYYQFSMILT-NFNISSSIHY 344


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 278,362,880
Number of Sequences: 1657284
Number of extensions: 4480496
Number of successful extensions: 10251
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10225
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 16143318346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)