Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0553
         (391 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC022093-1|AAH22093.3|  136|Homo sapiens TNRC5 protein protein.        30   2.3  
BC008961-1|AAH08961.1|  278|Homo sapiens trinucleotide repeat co...    30   2.3  
BC008898-1|AAH08898.1|  278|Homo sapiens trinucleotide repeat co...    30   2.3  
BC004423-1|AAH04423.1|  278|Homo sapiens trinucleotide repeat co...    30   2.3  
AY358960-1|AAQ89319.1|  278|Homo sapiens CTG4A protein.                30   2.3  
AL035587-1|CAB75301.1|  278|Homo sapiens protein ( Human DNA seq...    30   2.3  
AK090425-1|BAC03406.1|  114|Homo sapiens FLJ00338 protein protein.     30   2.3  
AF161347-1|AAF28907.1|  142|Homo sapiens HSPC084 protein.              30   2.3  
AY598959-1|AAT38467.1|  109|Homo sapiens immunoglobulin heavy ch...    28   9.3  

>BC022093-1|AAH22093.3|  136|Homo sapiens TNRC5 protein protein.
          Length = 136

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 390 HALKGVDDSCLYEELNNEKGD 328
           H LKG D SCL E+ + +KGD
Sbjct: 55  HVLKGKDTSCLAEQWSGKKGD 75


>BC008961-1|AAH08961.1|  278|Homo sapiens trinucleotide repeat
           containing 5 protein.
          Length = 278

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 390 HALKGVDDSCLYEELNNEKGD 328
           H LKG D SCL E+ + +KGD
Sbjct: 197 HVLKGKDTSCLAEQWSGKKGD 217


>BC008898-1|AAH08898.1|  278|Homo sapiens trinucleotide repeat
           containing 5 protein.
          Length = 278

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 390 HALKGVDDSCLYEELNNEKGD 328
           H LKG D SCL E+ + +KGD
Sbjct: 197 HVLKGKDTSCLAEQWSGKKGD 217


>BC004423-1|AAH04423.1|  278|Homo sapiens trinucleotide repeat
           containing 5 protein.
          Length = 278

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 390 HALKGVDDSCLYEELNNEKGD 328
           H LKG D SCL E+ + +KGD
Sbjct: 197 HVLKGKDTSCLAEQWSGKKGD 217


>AY358960-1|AAQ89319.1|  278|Homo sapiens CTG4A protein.
          Length = 278

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 390 HALKGVDDSCLYEELNNEKGD 328
           H LKG D SCL E+ + +KGD
Sbjct: 197 HVLKGKDTSCLAEQWSGKKGD 217


>AL035587-1|CAB75301.1|  278|Homo sapiens protein ( Human DNA
           sequence from clone RP3-475N16 on chromosome 6p12.3-21.2
            Contains part of a novel gene,a novel gene (CTG4A), a
           gene similar  ).
          Length = 278

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 390 HALKGVDDSCLYEELNNEKGD 328
           H LKG D SCL E+ + +KGD
Sbjct: 197 HVLKGKDTSCLAEQWSGKKGD 217


>AK090425-1|BAC03406.1|  114|Homo sapiens FLJ00338 protein protein.
          Length = 114

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 390 HALKGVDDSCLYEELNNEKGD 328
           H LKG D SCL E+ + +KGD
Sbjct: 33  HVLKGKDTSCLAEQWSGKKGD 53


>AF161347-1|AAF28907.1|  142|Homo sapiens HSPC084 protein.
          Length = 142

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 390 HALKGVDDSCLYEELNNEKGD 328
           H LKG D SCL E+ + +KGD
Sbjct: 45  HVLKGKDTSCLAEQWSGKKGD 65


>AY598959-1|AAT38467.1|  109|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 109

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 197 FSLYFTYTINLDTSVYYC 250
           FSL  TY    DT+VYYC
Sbjct: 78  FSLQLTYVTAADTAVYYC 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,084,037
Number of Sequences: 237096
Number of extensions: 676541
Number of successful extensions: 6142
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6142
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)