Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0551
(647 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g30610.1 68417.m04342 serine carboxypeptidase S10 family prot... 31 0.87
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 31 0.87
At3g29060.1 68416.m03635 EXS family protein / ERD1/XPR1/SYG1 fam... 29 2.7
At1g02460.1 68414.m00195 glycoside hydrolase family 28 protein /... 29 2.7
At4g23560.1 68417.m03394 glycosyl hydrolase family 9 protein sim... 29 3.5
At4g09740.1 68417.m01599 glycosyl hydrolase family 9 protein sim... 29 3.5
At5g10270.1 68418.m01192 cyclin-dependent kinase, putative / CDK... 28 4.7
At4g31160.1 68417.m04423 transducin family protein / WD-40 repea... 28 4.7
At5g45350.1 68418.m05567 proline-rich family protein contains pr... 28 6.1
At5g23210.2 68418.m02715 serine carboxypeptidase S10 family prot... 28 6.1
At5g23210.1 68418.m02714 serine carboxypeptidase S10 family prot... 28 6.1
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 28 6.1
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 28 6.1
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 28 6.1
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 28 6.1
At1g62790.1 68414.m07087 protease inhibitor/seed storage/lipid t... 28 6.1
At4g25840.1 68417.m03717 haloacid dehalogenase-like hydrolase fa... 27 8.1
At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containi... 27 8.1
>At4g30610.1 68417.m04342 serine carboxypeptidase S10 family protein
similar to Serine carboxypeptidase II chains A and B
(SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)];
Length = 465
Score = 30.7 bits (66), Expect = 0.87
Identities = 17/72 (23%), Positives = 28/72 (38%)
Frame = -1
Query: 608 YTELQQKLLANSTCKQKNKYKHCNSSLARNYNYFVLRRTVHCYSTCREISSNYNLTRPFI 429
+ ++ Q + TC + K+ R N + RR V Y C E + RP +
Sbjct: 272 FGDIDQYSIYTPTCVAAQQKKNTTGFFVRMKNTLLRRRLVSGYDPCTESYAEKYFNRPDV 331
Query: 428 VRRLYLGSRGAR 393
R ++ G R
Sbjct: 332 QRAMHANVTGIR 343
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 30.7 bits (66), Expect = 0.87
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 308 PGPVLFPPSPAGDPSQTSGVVVGASGYGFVPP 403
PGPVL PP PS +G + S GF+PP
Sbjct: 216 PGPVLGPPYSEPGPSTPTGSIPSPSS-GFLPP 246
>At3g29060.1 68416.m03635 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 794
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -3
Query: 390 PYPEAPTTTPLVCEGSPAGEGGNSTGPGFA 301
P P T PL +G G GG GPG +
Sbjct: 48 PPPSTGDTVPLKTDGGEGGGGGGGGGPGLS 77
>At1g02460.1 68414.m00195 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase PG1 GI:5669846, PG2 GI:5669848 from
(Glycine max); contains PF00295: Glycosyl hydrolases
family 28 (polygalacturonases)
Length = 491
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 296 PRANPGPVLFPPSPAGDPSQTSGVVVGASGYGFVPPG 406
P +P P L PPSP+ DP+ + + YG V G
Sbjct: 65 PPDSPAPSL-PPSPSDDPADDNNGIYNVRKYGAVGDG 100
>At4g23560.1 68417.m03394 glycosyl hydrolase family 9 protein
similar to cellulase GI:1039431 from [Phaseolus
vulgaris]
Length = 479
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 65 RRSGKLPTPECVEWRVD 15
+RSGKLPT + V+WR D
Sbjct: 38 QRSGKLPTNQRVKWRAD 54
>At4g09740.1 68417.m01599 glycosyl hydrolase family 9 protein
similar to endo-beta-1,4-glucanase; cellulase
GI:1655543 from [Capsicum annuum]
Length = 478
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 65 RRSGKLPTPECVEWRVD 15
+RSGKLPT + V+WR D
Sbjct: 38 QRSGKLPTNQRVKWRAD 54
>At5g10270.1 68418.m01192 cyclin-dependent kinase, putative / CDK,
putative similar to cyclin dependent kinase C
[Lycopersicon esculentum] gi|15215944|emb|CAC51391
Length = 505
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 296 PRANPGPVLFPPSPAGDPSQTSGVVVGASGY--GFVPPGSQGKAY 424
PR PGP +PPS +Q+ G GY G PP +G Y
Sbjct: 419 PRGPPGPNRYPPS----GNQSGGYNQSRGGYSSGSYPPQGRGAPY 459
>At4g31160.1 68417.m04423 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
KIAA0800 protein, Homo sapiens GI:3882321 EMBL:AB018343
Length = 1846
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 345 TPRRQAEWWSVLPDMGSCPPAPKVKPTDDE 434
TP Q +W S + G CP PK+ D++
Sbjct: 1156 TPVAQQQWPSGRANCGFCPSIPKINARDED 1185
>At5g45350.1 68418.m05567 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 177
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 296 PRANPGPVLFPPSPAG-DPSQTSGVVVGASGYGFVPP 403
P A P +PP+P G P+ G A GYG PP
Sbjct: 45 PPAGYPPGAYPPAPGGYPPAPGYGGYPPAPGYGGYPP 81
>At5g23210.2 68418.m02715 serine carboxypeptidase S10 family protein
similar to Serine carboxypeptidase II chains A and B
(SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)];
Length = 403
Score = 27.9 bits (59), Expect = 6.1
Identities = 25/102 (24%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
Frame = -1
Query: 623 DFEKIYTELQQKLLANSTCKQKNKYKHCNSSLARNYNYFVLRRTVHCYS-TCREISSNYN 447
D I L +K+ N KQK K CN +L ++ + + Y+ C S+N +
Sbjct: 157 DHAVISDALYEKVNKNCDFKQKLVTKECNDALDEYFDVYKILDMYSLYAPKCVPTSTNSS 216
Query: 446 LTRPFIVRRLYLGSRG-ARTHIRKHRPPLRLSARGHRPARGE 324
+ R R R + H R A G+ P E
Sbjct: 217 TSHSVAGNRPLPAFRSILRPRLISHNEGWRRMAAGYDPCASE 258
>At5g23210.1 68418.m02714 serine carboxypeptidase S10 family protein
similar to Serine carboxypeptidase II chains A and B
(SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)];
Length = 363
Score = 27.9 bits (59), Expect = 6.1
Identities = 25/102 (24%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
Frame = -1
Query: 623 DFEKIYTELQQKLLANSTCKQKNKYKHCNSSLARNYNYFVLRRTVHCYS-TCREISSNYN 447
D I L +K+ N KQK K CN +L ++ + + Y+ C S+N +
Sbjct: 157 DHAVISDALYEKVNKNCDFKQKLVTKECNDALDEYFDVYKILDMYSLYAPKCVPTSTNSS 216
Query: 446 LTRPFIVRRLYLGSRG-ARTHIRKHRPPLRLSARGHRPARGE 324
+ R R R + H R A G+ P E
Sbjct: 217 TSHSVAGNRPLPAFRSILRPRLISHNEGWRRMAAGYDPCASE 258
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -1
Query: 638 LGKQIDFEKIYTELQQKLLANSTCKQKNKYKHCNSSLARNYNY 510
LG +ID+ + Y + L N T + H +S L Y+Y
Sbjct: 1136 LGNEIDYSEDYEDRDTSDLGNETDYSEEYEDHDSSDLGNEYDY 1178
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = +2
Query: 257 GGNFNYLSAAARDPRANPGPVLFPPSPAGDPSQTSGVVVGASGYGFVPPGSQGKAYG 427
GG + +AR P GP PP P G P G G PPG+ G+ G
Sbjct: 660 GGGKSTNLPSARPPLPGGGPPPPPPPPGGGPPPPPG---GGPPPPPPPPGALGRGAG 713
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +2
Query: 302 ANPGPVLFPPSPAGDPSQTSGVVVGASGYG---FVPPGSQGK 418
+NP ++P + A PS+ + VG + G PPG +GK
Sbjct: 1068 SNPSSRVYPATVAAHPSEPNQFAVGLTDGGVHVIEPPGPEGK 1109
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +2
Query: 302 ANPGPVLFPPSPAGDPSQTSGVVVGASGYG---FVPPGSQGK 418
+NP ++P + A PS+ + VG + G PPG +GK
Sbjct: 1068 SNPSSRVYPATVAAHPSEPNQFAVGLTDGGVHVIEPPGPEGK 1109
>At1g62790.1 68414.m07087 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
protease inhibitor/seed storage/LTP family domain
PF00234
Length = 150
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 275 LSAAARDPRANPGPVLFPPSPAGDPSQTSGVVVGASGYG 391
LSA +P L PP+PAG+ + +G +GYG
Sbjct: 98 LSACTAKGAPSPKASLPPPAPAGNTKKDAGAGNKLAGYG 136
>At4g25840.1 68417.m03717 haloacid dehalogenase-like hydrolase
family protein low similarity to SP|Q08623 GS1 protein
{Homo sapiens}; contains InterPro accession IPR005834:
Haloacid dehalogenase-like hydrolase
Length = 298
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 635 GKQIDFEKIYTELQQKLLA 579
G +D EK YTE+Q+K+LA
Sbjct: 80 GLLLDTEKFYTEVQEKILA 98
>At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 682
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 390 GSCPPAPKVKPTDDEWPSQIVVRTNLSTRA 479
G+ P P V PT + PS +++T ++TRA
Sbjct: 143 GATSPNPGVLPTGNICPSGRILKTGMATRA 172
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,082,822
Number of Sequences: 28952
Number of extensions: 352629
Number of successful extensions: 1165
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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