Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0550
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   2.0  
AY045760-4|AAK84945.1|  165|Anopheles gambiae D7-related 4 prote...    24   4.5  
AJ302659-1|CAC35524.1|  165|Anopheles gambiae D7r4 protein protein.    24   4.5  

>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 220  RTEVIMSISVTKRLHCLLLFVNVCFSLIG 306
            R  V+  I+  KR H L LF N    +IG
Sbjct: 1034 RLPVLNGINAGKRSHILSLFANYVIHIIG 1062


>AY045760-4|AAK84945.1|  165|Anopheles gambiae D7-related 4 protein
           protein.
          Length = 165

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 208 CPTRRTEVIMSISVTKRLHCLL 273
           C  RR E+I    + K +HC++
Sbjct: 40  CEIRRYEIIEGPEMDKHIHCVM 61


>AJ302659-1|CAC35524.1|  165|Anopheles gambiae D7r4 protein protein.
          Length = 165

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 208 CPTRRTEVIMSISVTKRLHCLL 273
           C  RR E+I    + K +HC++
Sbjct: 40  CEIRRYEIIEGPEMDKHIHCVM 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,348
Number of Sequences: 2352
Number of extensions: 11066
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)