Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0549
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 0.069
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 0.069
U42843-4|AAA83595.1| 178|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 32 0.41
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 31 0.54
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 31 0.54
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 31 0.54
U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical pr... 31 0.72
AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical... 31 0.72
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical... 31 0.72
Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical p... 31 0.95
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 31 0.95
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 31 0.95
Z82286-4|CAB05310.1| 468|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 1.3
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 1.3
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 1.3
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 30 1.7
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 30 1.7
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 30 1.7
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 30 1.7
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 30 1.7
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 30 1.7
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 30 1.7
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.2
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 2.2
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 2.2
U41540-8|AAW30667.1| 571|Caenorhabditis elegans Hypothetical pr... 29 2.2
U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical pr... 29 2.2
U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical pr... 29 2.2
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 29 2.2
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 29 2.2
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 29 2.2
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 2.2
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 2.2
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 29 2.2
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 2.2
Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical pr... 29 2.9
U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein. 29 2.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 2.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 2.9
U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated p... 29 2.9
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 29 2.9
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 29 2.9
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 29 2.9
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 29 2.9
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 29 2.9
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 29 2.9
AF098999-4|AAC68729.1| 659|Caenorhabditis elegans Hypothetical ... 29 2.9
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 29 2.9
Z75711-7|CAB00031.2| 380|Caenorhabditis elegans Hypothetical pr... 29 3.8
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 3.8
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 29 3.8
AF286377-1|AAG10298.1| 380|Caenorhabditis elegans POU family II... 29 3.8
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 3.8
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 3.8
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 3.8
U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 rela... 28 5.1
AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell fac... 28 5.1
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z68004-8|CAA91989.1| 218|Caenorhabditis elegans Hypothetical pr... 28 6.7
U53334-1|AAA96168.1| 508|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 28 6.7
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 28 6.7
AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical ... 28 6.7
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 27 8.9
U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer ... 27 8.9
U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer ... 27 8.9
U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer ... 27 8.9
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 27 8.9
AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein. 27 8.9
AC006637-1|AAK85476.2| 342|Caenorhabditis elegans Hypothetical ... 27 8.9
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect(2) = 0.069
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 315 PAPMVFTSSPPSL**TRGATAPPPLPPSTG 404
P P T PP + T G T PP PPS+G
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSG 304
Score = 23.4 bits (48), Expect(2) = 0.069
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +3
Query: 378 PPPLPPSTGETGSSETQPALDKTP 449
PPP PP G T P + P
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPP 330
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect(2) = 0.069
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 315 PAPMVFTSSPPSL**TRGATAPPPLPPSTG 404
P P T PP + T G T PP PPS+G
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSG 294
Score = 23.4 bits (48), Expect(2) = 0.069
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +3
Query: 378 PPPLPPSTGETGSSETQPALDKTP 449
PPP PP G T P + P
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPP 320
>U42843-4|AAA83595.1| 178|Caenorhabditis elegans Hypothetical
protein T19E7.1 protein.
Length = 178
Score = 33.1 bits (72), Expect = 0.18
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = -2
Query: 639 IGLNLLLDYFHCVRGTDGRRFSTCSGITKSQGHSPSVFLVSVGFAENGLGSWLESATVWL 460
IGLN L D FH + +DG + SQ + P V + F + G+W +
Sbjct: 108 IGLNKLNDTFHVYKWSDGSEADYLNW-ASSQPNEPDVDCAYMAFHQEQRGTWFD------ 160
Query: 459 WGCVEFCPE 433
+GC E P+
Sbjct: 161 YGCREMLPQ 169
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 31.9 bits (69), Expect = 0.41
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Frame = +3
Query: 291 PLKQHKLKPAPM--VFTSSPPSL**TRGATAPPPLP-PSTGETGSSETQPALDKTPHNPT 461
P+ Q + P P F PS+ G PP+ P + G + QP + P
Sbjct: 214 PMVQQQQMPMPPKPTFAHPGPSMGPPMGPPMGPPMGHPQAPQYGQNYGQPVAPQQYKPPP 273
Query: 462 AKRSPIQAKNRDRSPQNRQRQETQ 533
++ P+Q + + PQ ++E Q
Sbjct: 274 QQQPPVQMRPPVQQPQQNHQEEQQ 297
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 31.5 bits (68), Expect = 0.54
Identities = 21/59 (35%), Positives = 26/59 (44%)
Frame = +3
Query: 306 KLKPAPMVFTSSPPSL**TRGATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQ 482
K P P+ +PP + GA APPPLPP A+D+TP N P Q
Sbjct: 978 KRNPPPL---GAPPKV--PEGARAPPPLPPR-----PKVKTTAVDETPQNLVPNNQPAQ 1026
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 360 TRGATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSP 476
TR PPP+PP P L P P R+P
Sbjct: 959 TRSPALPPPVPPREAPPIPKRNPPPLGAPPKVPEGARAP 997
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 31.5 bits (68), Expect = 0.54
Identities = 21/59 (35%), Positives = 26/59 (44%)
Frame = +3
Query: 306 KLKPAPMVFTSSPPSL**TRGATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQ 482
K P P+ +PP + GA APPPLPP A+D+TP N P Q
Sbjct: 978 KRNPPPL---GAPPKV--PEGARAPPPLPPR-----PKVKTTAVDETPQNLVPNNQPAQ 1026
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 360 TRGATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSP 476
TR PPP+PP P L P P R+P
Sbjct: 959 TRSPALPPPVPPREAPPIPKRNPPPLGAPPKVPEGARAP 997
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 31.5 bits (68), Expect = 0.54
Identities = 21/59 (35%), Positives = 26/59 (44%)
Frame = +3
Query: 306 KLKPAPMVFTSSPPSL**TRGATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQ 482
K P P+ +PP + GA APPPLPP A+D+TP N P Q
Sbjct: 978 KRNPPPL---GAPPKV--PEGARAPPPLPPR-----PKVKTTAVDETPQNLVPNNQPAQ 1026
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 360 TRGATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSP 476
TR PPP+PP P L P P R+P
Sbjct: 959 TRSPALPPPVPPREAPPIPKRNPPPLGAPPKVPEGARAP 997
>U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical
protein T13A10.1 protein.
Length = 155
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 375 APPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQAKNRDRSPQNRQRQE 527
APPP PP + E +P +K+ K K D++ ++++ ++
Sbjct: 52 APPPPPPEAEKKPEKEEEPKKEKSKMKSEVKEPDAPKKENDKTSEDKKEKQ 102
>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
protein Y105E8A.26b protein.
Length = 1133
Score = 31.1 bits (67), Expect = 0.72
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +3
Query: 204 NNMQDDGRSPNPEDVDGLKKQFQSSKIKTPLKQHKLKPAPMVFTSSPPSL**TRGA--TA 377
+NMQ + P + D Q +S + H L P+ M +SS S +G TA
Sbjct: 843 SNMQHRLDNTTPSNFDFSNVQPSNSNPVPNGRYHPLTPSSMTSSSSGASRTAGQGQQQTA 902
Query: 378 PPPLPPSTGETGSS 419
PPP PP SS
Sbjct: 903 PPPRPPPVNSGNSS 916
>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
protein Y105E8A.26a protein.
Length = 1172
Score = 31.1 bits (67), Expect = 0.72
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +3
Query: 204 NNMQDDGRSPNPEDVDGLKKQFQSSKIKTPLKQHKLKPAPMVFTSSPPSL**TRGA--TA 377
+NMQ + P + D Q +S + H L P+ M +SS S +G TA
Sbjct: 882 SNMQHRLDNTTPSNFDFSNVQPSNSNPVPNGRYHPLTPSSMTSSSSGASRTAGQGQQQTA 941
Query: 378 PPPLPPSTGETGSS 419
PPP PP SS
Sbjct: 942 PPPRPPPVNSGNSS 955
>Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical
protein Y57G11C.51 protein.
Length = 160
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 363 RGATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSP 476
R + P P PS+ + S+ + P+ TP T +RSP
Sbjct: 117 RWSPQPDPSTPSSSTSSSTSSSPSSSSTPLTSTQRRSP 154
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 30.7 bits (66), Expect = 0.95
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Frame = +3
Query: 375 APPPLPPSTGETGSSETQPALDK--TPHNPTAK----RSPIQAKNRDRSPQNRQRQET 530
AP P PP++ + S TQP+ TP P AK RS + K+ S R R T
Sbjct: 1275 APAPSPPASRRSVSRTTQPSTSSFATPTEPPAKNKRMRSVVPPKSEPASSAKRVRATT 1332
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 312 KPAPMVFTSSPPSL**TRGATAPPPLPPSTGETGSSETQPAL 437
KPA + PPS +AP P P T +S T PA+
Sbjct: 291 KPAKISVADPPPSTIAPAAPSAPAPAPSQLNPTSTSPTMPAI 332
>Z82286-4|CAB05310.1| 468|Caenorhabditis elegans Hypothetical
protein W02A2.7 protein.
Length = 468
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 291 PLKQHKLKPAPMVFTSSPPSL**TRGATAPPPLPPSTG-ETGSSETQPALDKTPHNPTAK 467
P+ H ++ APM+ + T+ A P P G E S+ T P TP + +
Sbjct: 135 PMYFHPMQAAPML-PEQMGVMPHTQPAIPPQQQPRQVGVEISSTRTAPLTSSTPLPTSLE 193
Query: 468 RSPIQAKNRDRSPQNR 515
+Q NR+R+ Q R
Sbjct: 194 YETVQRDNRNRNIQFR 209
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +3
Query: 288 TPLKQHKLKPAPMVFTSSPPSL**TRGATAPPPLPPSTGETGSSET--QPALDKTPHNPT 461
TP K AP T+ PP +G PP P + G+ G + T +P D P +P
Sbjct: 127 TPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPG 186
Query: 462 AKRSP 476
+ P
Sbjct: 187 PRGPP 191
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +3
Query: 288 TPLKQHKLKPAPMVFTSSPPSL**TRGATAPPPLPPSTGETGSSET--QPALDKTPHNPT 461
TP K AP T+ PP +G PP P + G+ G + T +P D P +P
Sbjct: 122 TPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPG 181
Query: 462 AKRSP 476
+ P
Sbjct: 182 PRGPP 186
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +3
Query: 288 TPLKQHKLKPAPMVFTSSPPSL**TRGATAPPPLPPSTGETGSSET--QPALDKTPHNPT 461
TP K AP T+ PP +G PP P + G+ G + T +P D P +P
Sbjct: 122 TPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPG 181
Query: 462 AKRSP 476
+ P
Sbjct: 182 PRGPP 186
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +3
Query: 297 KQHKLKPAPMVFTSS--PPSL**TRGATAPPPLPPSTGETGSSETQPALDKTPHNPT-AK 467
K K KPA V +S+ PP PP PP + E + ++K P P +K
Sbjct: 36 KSKKNKPARSVASSAEPPPPPPPAPKVPEPPKAPPPVDDVKKIE-EKEVEKKPDEPAKSK 94
Query: 468 RSPIQAKNRDRSPQNRQRQETQKENDLE 551
+S + K+++ + + ++ +K E
Sbjct: 95 KSEKKEKSKNEGSKKEESKDKEKSKKSE 122
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 29.9 bits (64), Expect = 1.7
Identities = 34/145 (23%), Positives = 51/145 (35%), Gaps = 4/145 (2%)
Frame = +3
Query: 75 LKCNWWFYVDCKNTRKLYDTNIPVSKSYQLMKALTFFSSYKKDNNMQDDGRSPNPEDVDG 254
+KC+ +F+ C N KL+ P Y L + L F KD + +
Sbjct: 215 VKCSPYFW-QCSNG-KLFRKTCPEKLIYVLDQNLCDFPESVKDCPEYNGSETSYRAPKTT 272
Query: 255 LKKQFQSSKIKTPLKQHKLKPAPMVFTSSPPSL**TRGATAPPPLPPSTGETGSSETQPA 434
S + P+ PA S P + R +A PP PP T +
Sbjct: 273 TSSSSYGSIAEAPVDPTPYAPASAPVYSPPRTTYVPRSTSAAPPNPPPQNPTAAPYVPTE 332
Query: 435 LDKTP-HNPTAKRSPI---QAKNRD 497
+P + T + +P KNRD
Sbjct: 333 ATPSPVFSSTVRYNPAVHGDCKNRD 357
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 29.9 bits (64), Expect = 1.7
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 10/134 (7%)
Frame = +3
Query: 180 FFSSYKKDNNMQDDGRSPNPEDVDGLKKQFQSSKIKTPLKQHKLKPAPMVFTSSPPSL** 359
F S KD + D + + ++ K F KI TPL+ ++ ++ P L
Sbjct: 219 FLSDVNKDGKLSVDEYAISQYMIEMFKSGFALPKI-TPLELVRMCGISSRSANNTPEL-- 275
Query: 360 TRGATAPPPLP-PSTGET--------GSSETQPALDKTPHNPTAKRSPIQAKNRDR-SPQ 509
GA P P P T E G +E + +R+ ++ K R+ + +
Sbjct: 276 EPGAEPPQKSPAPKTFEDKRQDNLSKGQAELERRRRVLEEEEQRRRAEVEKKEREEEAKK 335
Query: 510 NRQRQETQKENDLE 551
NR+RQE +++ ++E
Sbjct: 336 NRERQEKERQAEVE 349
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 369 ATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQA 485
A A P P+ E + E +PA D+T PTA+ + +A
Sbjct: 518 AEAEPEAEPAVEEEPAEEPEPAADETATEPTAEEAEPEA 556
Score = 27.9 bits (59), Expect = 6.7
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +2
Query: 260 EAISILENQDTTKTAQTETGSDGLHIITPQPLIDERSNRATPPAPVYRGDRQLGNTTRSG 439
EA + E T KTA +E S + P P S PP P ++ T +S
Sbjct: 288 EADAGSEVPPTPKTAASEKQS-----VPPTPKSAAPSE--VPPTPKSAAPSEVPPTPKSA 340
Query: 440 QNSTQPHS-QTVADSSQEPRPFSAKPTETRNT 532
S P + ++ A SS P P SA P+E T
Sbjct: 341 APSEVPLTPKSAAQSSVPPTPKSAVPSEAPPT 372
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 369 ATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQA 485
A A P P+ E + E +PA D+T PTA+ + +A
Sbjct: 468 AEAEPEAEPAVEEEPAEEPEPAADETATEPTAEEAEPEA 506
Score = 27.9 bits (59), Expect = 6.7
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +2
Query: 260 EAISILENQDTTKTAQTETGSDGLHIITPQPLIDERSNRATPPAPVYRGDRQLGNTTRSG 439
EA + E T KTA +E S + P P S PP P ++ T +S
Sbjct: 238 EADAGSEVPPTPKTAASEKQS-----VPPTPKSAAPSE--VPPTPKSAAPSEVPPTPKSA 290
Query: 440 QNSTQPHS-QTVADSSQEPRPFSAKPTETRNT 532
S P + ++ A SS P P SA P+E T
Sbjct: 291 APSEVPLTPKSAAQSSVPPTPKSAVPSEAPPT 322
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 369 ATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQA 485
A A P P+ E + E +PA D+T PTA+ + +A
Sbjct: 518 AEAEPEAEPAVEEEPAEEPEPAADETATEPTAEEAEPEA 556
Score = 27.9 bits (59), Expect = 6.7
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +2
Query: 260 EAISILENQDTTKTAQTETGSDGLHIITPQPLIDERSNRATPPAPVYRGDRQLGNTTRSG 439
EA + E T KTA +E S + P P S PP P ++ T +S
Sbjct: 288 EADAGSEVPPTPKTAASEKQS-----VPPTPKSAAPSE--VPPTPKSAAPSEVPPTPKSA 340
Query: 440 QNSTQPHS-QTVADSSQEPRPFSAKPTETRNT 532
S P + ++ A SS P P SA P+E T
Sbjct: 341 APSEVPLTPKSAAQSSVPPTPKSAVPSEAPPT 372
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 369 ATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQA 485
A A P P+ E + E +PA D+T PTA+ + +A
Sbjct: 518 AEAEPEAEPAVEEEPAEEPEPAADETATEPTAEEAEPEA 556
Score = 27.9 bits (59), Expect = 6.7
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +2
Query: 260 EAISILENQDTTKTAQTETGSDGLHIITPQPLIDERSNRATPPAPVYRGDRQLGNTTRSG 439
EA + E T KTA +E S + P P S PP P ++ T +S
Sbjct: 288 EADAGSEVPPTPKTAASEKQS-----VPPTPKSAAPSE--VPPTPKSAAPSEVPPTPKSA 340
Query: 440 QNSTQPHS-QTVADSSQEPRPFSAKPTETRNT 532
S P + ++ A SS P P SA P+E T
Sbjct: 341 APSEVPLTPKSAAQSSVPPTPKSAVPSEAPPT 372
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.5 bits (63), Expect = 2.2
Identities = 29/105 (27%), Positives = 44/105 (41%)
Frame = +3
Query: 225 RSPNPEDVDGLKKQFQSSKIKTPLKQHKLKPAPMVFTSSPPSL**TRGATAPPPLPPSTG 404
+SP P Q +S K + K PAP SP + + +PPP P
Sbjct: 312 KSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSA------SKSPPPAPKRA- 364
Query: 405 ETGSSETQPALDKTPHNPTAKRSPIQAKNRDRSPQNRQRQETQKE 539
S++ PA + +P+A +SP A R RSP + ++E
Sbjct: 365 -KSRSKSPPA--RRRRSPSASKSP-PAPRRRRSPSKSRSPAPKRE 405
Score = 29.5 bits (63), Expect = 2.2
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 9/107 (8%)
Frame = +3
Query: 225 RSPNPEDVDGLKKQFQSSKIKTPLKQHKLKPAPMVFTS---SPPSL**TRGAT-APPPLP 392
RSP+ K++ ++ + K PAP S SPP+ R + + P P
Sbjct: 392 RSPSKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRRRSPSQSKSPAP 451
Query: 393 PSTGETGSSETQPALDKTP-----HNPTAKRSPIQAKNRDRSPQNRQ 518
S P ++P +P +RSP A R +SPQ R+
Sbjct: 452 RRRRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSPQRRR 498
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/102 (25%), Positives = 37/102 (36%)
Frame = +3
Query: 168 KALTFFSSYKKDNNMQDDGRSPNPEDVDGLKKQFQSSKIKTPLKQHKLKPAPMVFTSSPP 347
+A T SS + ++PNP G QS P P T SP
Sbjct: 834 EASTSGSSVASSSPAPSTSQNPNPSTSSGSSMITQS-----PYPSQSTSPVESSTTPSPG 888
Query: 348 SL**TRGATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRS 473
S T +T+P P +T + T P + T T++ S
Sbjct: 889 SPGTTLTSTSPSPSQSTTIGSTQGSTSPGISTTSEEMTSQGS 930
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 318 APMVFTSSPPSL**TRGATAPPPLPPSTGETGSSET--QPALDKTPHNPTAKRSP 476
AP T+ PP +G PP P + G+ G + T +P D TP P + P
Sbjct: 139 APCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPGLPGPRGPP 193
>U41540-8|AAW30667.1| 571|Caenorhabditis elegans Hypothetical
protein F35H12.2c protein.
Length = 571
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +2
Query: 140 SSVQELSAHEGPDLLLFIQEGQQHARRWSLTKP*RRGRIKEAISILENQDTTKTAQTETG 319
S V S GPDLL ++E + H + + + + EA NQD T ++
Sbjct: 481 SPVHSASTPTGPDLLTKLEEREDHIKNLEIDLAQTKLSLVEA--ECRNQDLTHQLMAQSE 538
Query: 320 SDG 328
SDG
Sbjct: 539 SDG 541
>U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical protein
F35H12.2a protein.
Length = 930
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +2
Query: 140 SSVQELSAHEGPDLLLFIQEGQQHARRWSLTKP*RRGRIKEAISILENQDTTKTAQTETG 319
S V S GPDLL ++E + H + + + + EA NQD T ++
Sbjct: 840 SPVHSASTPTGPDLLTKLEEREDHIKNLEIDLAQTKLSLVEA--ECRNQDLTHQLMAQSE 897
Query: 320 SDG 328
SDG
Sbjct: 898 SDG 900
>U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical protein
F35H12.2b protein.
Length = 934
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +2
Query: 140 SSVQELSAHEGPDLLLFIQEGQQHARRWSLTKP*RRGRIKEAISILENQDTTKTAQTETG 319
S V S GPDLL ++E + H + + + + EA NQD T ++
Sbjct: 844 SPVHSASTPTGPDLLTKLEEREDHIKNLEIDLAQTKLSLVEA--ECRNQDLTHQLMAQSE 901
Query: 320 SDG 328
SDG
Sbjct: 902 SDG 904
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 6 LTDDGLVMKSFLCPESTLFDQTILKCNW 89
LT G + + CP S +F+ TIL C+W
Sbjct: 265 LTCSGGIARIMDCPASLVFNPTILVCDW 292
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 6 LTDDGLVMKSFLCPESTLFDQTILKCNW 89
LT G + + CP S +F+ TIL C+W
Sbjct: 265 LTCSGGIARIMDCPASLVFNPTILVCDW 292
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 340 HPPAFNRREEQPRHPPCPRLQG--RQAARKHNPLWTKLHTTPQPNGRRFKP 486
HP + ++ P PP R+Q +Q + H L + PQP + F+P
Sbjct: 544 HPNEGQQFQQGPPPPPPQRIQNHQQQMQQYHQQLQVQQQQQPQPRAQPFRP 594
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 372 TAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQAKNRDRSP 506
T PPLPP + +P P PT + PI A R P
Sbjct: 70 TESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP 114
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 372 TAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQAKNRDRSP 506
T PPLPP + +P P PT + PI A R P
Sbjct: 292 TESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP 336
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 340 HPPAFNRREEQPRHPPCPRLQG--RQAARKHNPLWTKLHTTPQPNGRRFKP 486
HP + ++ P PP R+Q +Q + H L + PQP + F+P
Sbjct: 544 HPNEGQQFQQGPPPPPPQRIQNHQQQMQQYHQQLQVQQQQQPQPRAQPFRP 594
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 318 APMVFTSSPPSL**TRGATAPPPLPPSTGETGSSET--QPALDKTPHNPTAKRSP 476
AP T+ PP +G PP P + G+ G + T +P D TP P + P
Sbjct: 139 APCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPGLPGPRGPP 193
>Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical
protein F58A3.1a protein.
Length = 592
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +1
Query: 325 WSSHHHPPAFNRREEQPRHPPCPRLQGRQAARKHNPLWTKLHTTPQPNGRRFKP 486
+ ++ HPP F E H P QG + ++N + T PQP G P
Sbjct: 10 YGNYGHPPPFAGPESSNSHYGMPPSQGTNS--QNNMMMRSQATEPQPIGNTVSP 61
>U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein.
Length = 592
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +1
Query: 325 WSSHHHPPAFNRREEQPRHPPCPRLQGRQAARKHNPLWTKLHTTPQPNGRRFKP 486
+ ++ HPP F E H P QG + ++N + T PQP G P
Sbjct: 10 YGNYGHPPPFAGPESSNSHYGMPPSQGTNS--QNNMMMRSQATEPQPIGNTVSP 61
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 378 PPPLPPSTGETGSSETQPALDKTPHNPTAKRSP 476
PPP PPS+G G + ++P L + P+ T + P
Sbjct: 574 PPPPPPSSGTRGIAPSRP-LPQAPNYGTPENRP 605
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 366 GATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQAKNRDRSPQ 509
GA PPP PP +G G + L + + IQA + RS Q
Sbjct: 647 GAPPPPPPPPPSGAGGPASVLAKLPPAQDGRSNLLAEIQAGKQLRSVQ 694
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 378 PPPLPPSTGETGSSETQPALDKTPHNPTAKRSP 476
PPP PPS+G G + ++P L + P+ T + P
Sbjct: 400 PPPPPPSSGTRGIAPSRP-LPQAPNYGTPENRP 431
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 366 GATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQAKNRDRSPQ 509
GA PPP PP +G G + L + + IQA + RS Q
Sbjct: 473 GAPPPPPPPPPSGAGGPASVLAKLPPAQDGRSNLLAEIQAGKQLRSVQ 520
>U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated
protein 2, isoform d protein.
Length = 286
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +1
Query: 331 SHHHPPAFNRREEQPRHPPCPRLQGRQAARKHNPLWTKLHTTPQPN 468
SH H P +++ QP + P + R + + P ++ + P P+
Sbjct: 183 SHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQYYEIPSPS 228
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +1
Query: 331 SHHHPPAFNRREEQPRHPPCPRLQGRQAARKHNPLWTKLHTTPQPN 468
SH H P +++ QP + P + R + + P ++ + P P+
Sbjct: 1823 SHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQYYEIPSPS 1868
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +1
Query: 331 SHHHPPAFNRREEQPRHPPCPRLQGRQAARKHNPLWTKLHTTPQPN 468
SH H P +++ QP + P + R + + P ++ + P P+
Sbjct: 1924 SHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQYYEIPSPS 1969
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical protein
F13B9.1c protein.
Length = 1609
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 369 ATAPPPLPP-STGETGSSETQPALDKTPHNPTAKRSPIQAKNRDRSPQN 512
A++PP LPP + S P+ + N T+ + P Q + ++ +N
Sbjct: 1415 ASSPPTLPPVQSVPVSSKPAPPSAENQAQNSTSPQQPTQEQGQETQDRN 1463
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical protein
F13B9.1b protein.
Length = 1614
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 369 ATAPPPLPP-STGETGSSETQPALDKTPHNPTAKRSPIQAKNRDRSPQN 512
A++PP LPP + S P+ + N T+ + P Q + ++ +N
Sbjct: 1415 ASSPPTLPPVQSVPVSSKPAPPSAENQAQNSTSPQQPTQEQGQETQDRN 1463
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical protein
F13B9.1a protein.
Length = 1632
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 369 ATAPPPLPP-STGETGSSETQPALDKTPHNPTAKRSPIQAKNRDRSPQN 512
A++PP LPP + S P+ + N T+ + P Q + ++ +N
Sbjct: 1437 ASSPPTLPPVQSVPVSSKPAPPSAENQAQNSTSPQQPTQEQGQETQDRN 1485
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +1
Query: 331 SHHHPPAFNRREEQPRHPPCPRLQGRQAARKHNPLWTKLHTTPQPN 468
SH H P +++ QP + P + R + + P ++ + P P+
Sbjct: 1924 SHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQYYEIPSPS 1969
>AF098999-4|AAC68729.1| 659|Caenorhabditis elegans Hypothetical
protein W04C9.6 protein.
Length = 659
Score = 29.1 bits (62), Expect = 2.9
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +3
Query: 231 PNPEDVDGLKKQFQSSKIKTP-LKQHKLKPAPMVFTSSPPSL**TRGATAPPPLPPSTGE 407
P P V + Q S +P + Q + P + S PS+ A PPP+PP G
Sbjct: 501 PMPPMVFQMSPSPQMSPQMSPQMSQQRNYPQLQMMASQTPSM-----APLPPPMPPIVGS 555
Query: 408 TGS-SETQPALDKTPHN-PTAKRSP 476
+ + S Q L+K + TA +P
Sbjct: 556 SSAISSIQNLLEKQQNQYETAPETP 580
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 378 PPPLPPSTGETGSSETQPALDK--TPHNPTAK----RSPIQAKNRDRSPQNRQRQET 530
P P PP++ + S TQP+ TP P AK RS + K+ S R R T
Sbjct: 1260 PAPSPPASRRSVSRTTQPSTSSFATPTEPPAKNKRMRSVVPPKSEPASSAKRVRATT 1316
>Z75711-7|CAB00031.2| 380|Caenorhabditis elegans Hypothetical
protein K02B12.1 protein.
Length = 380
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 204 NNMQDDGRSPNPEDVDGLKKQFQSSKIK 287
+++ DD P+D++G KQF+ +IK
Sbjct: 181 SDISDDSEQTCPDDLEGFAKQFKQRRIK 208
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.7 bits (61), Expect = 3.8
Identities = 28/122 (22%), Positives = 47/122 (38%)
Frame = +3
Query: 186 SSYKKDNNMQDDGRSPNPEDVDGLKKQFQSSKIKTPLKQHKLKPAPMVFTSSPPSL**TR 365
S KK + +P +K + ++K+P K+ K +P SP S
Sbjct: 1395 SPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKT 1454
Query: 366 GATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQAKNRDRSPQNRQRQETQKEND 545
G PP S T+ +K+P P +SP++ +++SP E E
Sbjct: 1455 GDEVKEKSPP------KSPTKK--EKSPEKPEDVKSPVK---KEKSPDATNIVEVSSETT 1503
Query: 546 LE 551
+E
Sbjct: 1504 IE 1505
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 360 TRGATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSP--IQAKNRDRSPQNRQRQETQ 533
T+ +P TG+ ++ ++ P +PT K+SP K + +SP+ + +
Sbjct: 1827 TKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAEKPPAPK 1886
Query: 534 KENDLEI 554
DL++
Sbjct: 1887 LTRDLKL 1893
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 333 TSSPPSL**TRGATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQAKNRDRS 503
TS+ PS T T P P PST E + T P L + SP+ A + +R+
Sbjct: 297 TSTVPST--TTSTTTPKPSSPSTAE---ASTTPVLTSNLTSALTSTSPLLASSTERT 348
>AF286377-1|AAG10298.1| 380|Caenorhabditis elegans POU family III
homeodomain proteinCEH-6 protein.
Length = 380
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 204 NNMQDDGRSPNPEDVDGLKKQFQSSKIK 287
+++ DD P+D++G KQF+ +IK
Sbjct: 181 SDISDDSEQTCPDDLEGFAKQFKQRRIK 208
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.7 bits (61), Expect = 3.8
Identities = 28/122 (22%), Positives = 47/122 (38%)
Frame = +3
Query: 186 SSYKKDNNMQDDGRSPNPEDVDGLKKQFQSSKIKTPLKQHKLKPAPMVFTSSPPSL**TR 365
S KK + +P +K + ++K+P K+ K +P SP S
Sbjct: 1395 SPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKT 1454
Query: 366 GATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQAKNRDRSPQNRQRQETQKEND 545
G PP S T+ +K+P P +SP++ +++SP E E
Sbjct: 1455 GDEVKEKSPP------KSPTKK--EKSPEKPEDVKSPVK---KEKSPDATNIVEVSSETT 1503
Query: 546 LE 551
+E
Sbjct: 1504 IE 1505
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 360 TRGATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSP--IQAKNRDRSPQNRQRQETQ 533
T+ +P TG+ ++ ++ P +PT K+SP K + +SP+ + +
Sbjct: 1827 TKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAEKPPAPK 1886
Query: 534 KENDLEI 554
DL++
Sbjct: 1887 LTRDLKL 1893
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.7 bits (61), Expect = 3.8
Identities = 28/122 (22%), Positives = 47/122 (38%)
Frame = +3
Query: 186 SSYKKDNNMQDDGRSPNPEDVDGLKKQFQSSKIKTPLKQHKLKPAPMVFTSSPPSL**TR 365
S KK + +P +K + ++K+P K+ K +P SP S
Sbjct: 1395 SPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKT 1454
Query: 366 GATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQAKNRDRSPQNRQRQETQKEND 545
G PP S T+ +K+P P +SP++ +++SP E E
Sbjct: 1455 GDEVKEKSPP------KSPTKK--EKSPEKPEDVKSPVK---KEKSPDATNIVEVSSETT 1503
Query: 546 LE 551
+E
Sbjct: 1504 IE 1505
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 360 TRGATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSP--IQAKNRDRSPQNRQRQETQ 533
T+ +P TG+ ++ ++ P +PT K+SP K + +SP+ + +
Sbjct: 1827 TKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAEKPPAPK 1886
Query: 534 KENDLEI 554
DL++
Sbjct: 1887 LTRDLKL 1893
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.7 bits (61), Expect = 3.8
Identities = 28/122 (22%), Positives = 47/122 (38%)
Frame = +3
Query: 186 SSYKKDNNMQDDGRSPNPEDVDGLKKQFQSSKIKTPLKQHKLKPAPMVFTSSPPSL**TR 365
S KK + +P +K + ++K+P K+ K +P SP S
Sbjct: 1395 SPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKT 1454
Query: 366 GATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQAKNRDRSPQNRQRQETQKEND 545
G PP S T+ +K+P P +SP++ +++SP E E
Sbjct: 1455 GDEVKEKSPP------KSPTKK--EKSPEKPEDVKSPVK---KEKSPDATNIVEVSSETT 1503
Query: 546 LE 551
+E
Sbjct: 1504 IE 1505
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 360 TRGATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSP--IQAKNRDRSPQNRQRQETQ 533
T+ +P TG+ ++ ++ P +PT K+SP K + +SP+ + +
Sbjct: 1827 TKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAEKPPAPK 1886
Query: 534 KENDLEI 554
DL++
Sbjct: 1887 LTRDLKL 1893
>U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 related
protein 1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/87 (24%), Positives = 35/87 (40%)
Frame = +3
Query: 291 PLKQHKLKPAPMVFTSSPPSL**TRGATAPPPLPPSTGETGSSETQPALDKTPHNPTAKR 470
P Q + + +P + PS+ T+G T P P Q + T N TA
Sbjct: 440 PPSQKETEQSPKKPQGTAPSIISTQGTTYTAPADPKPATDEGGLPQDLFEDTEKNETA-- 497
Query: 471 SPIQAKNRDRSPQNRQRQETQKENDLE 551
SP ++ + + + Q+ E+ LE
Sbjct: 498 SPKRSNDAQSADSSTCEQKKTDESGLE 524
>AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell factor
1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/87 (24%), Positives = 35/87 (40%)
Frame = +3
Query: 291 PLKQHKLKPAPMVFTSSPPSL**TRGATAPPPLPPSTGETGSSETQPALDKTPHNPTAKR 470
P Q + + +P + PS+ T+G T P P Q + T N TA
Sbjct: 440 PPSQKETEQSPKKPQGTAPSIISTQGTTYTAPADPKPATDEGGLPQDLFEDTEKNETA-- 497
Query: 471 SPIQAKNRDRSPQNRQRQETQKENDLE 551
SP ++ + + + Q+ E+ LE
Sbjct: 498 SPKRSNDAQSADSSTCEQKKTDESGLE 524
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +3
Query: 291 PLKQHKLKPAPMVFTSSPPSL**TRGATAPPPLPPSTGETGSSETQPALDKTPHNPT-AK 467
P K+ + AP + PP PP PP E + +K P P +K
Sbjct: 37 PKKKKDVSGAPSAESPPPPPP--APKVPEPPKAPPPADAVKKIE-EKGEEKKPEEPAKSK 93
Query: 468 RSPIQAKNRDRSPQNRQRQETQKE 539
+S + K+++ + + +E +KE
Sbjct: 94 KSEKKEKSKNEGSKKEEDKEKEKE 117
>Z68004-8|CAA91989.1| 218|Caenorhabditis elegans Hypothetical
protein F47B10.9 protein.
Length = 218
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 9 TDDGLVMKSFLCPESTLFDQTILKCN 86
TD+ +V S++CPE FD+TI + N
Sbjct: 74 TDELVVFLSYVCPEGFEFDRTINQQN 99
>U53334-1|AAA96168.1| 508|Caenorhabditis elegans Hypothetical
protein R105.1 protein.
Length = 508
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +3
Query: 30 KSFLCPESTLFDQTILKCNW---WFYVDCKNTRKLYDTNIPVSKSYQLMKALTFFSSYKK 200
K F CPE + + +K WF D T ++ N P K+ K +T + Y
Sbjct: 26 KEFACPEGLVINGYQVKSQTKQGWFTYDYGVTDMVFFCNTPDGKNQNTDKNITRGNFYPY 85
Query: 201 DNNM 212
DN++
Sbjct: 86 DNDI 89
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 360 TRGATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSP 476
T+ A PPP PP+ ++ P TP +P R P
Sbjct: 129 TKRAAPPPPPPPAA--AAAAPISPKAAPTPQSPAPNRVP 165
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/57 (28%), Positives = 22/57 (38%)
Frame = +3
Query: 366 GATAPPPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQAKNRDRSPQNRQRQETQK 536
G PP P +GE GSS Q D H PT+ + R ++ R +
Sbjct: 113 GIPVPPEKPERSGE-GSSTEQRDRDHRQHRPTSHHHRDHKDHHRRDDKHHHRDSNHR 168
>AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical
protein Y73B3A.1 protein.
Length = 659
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 375 APPPLPPSTGETGSSETQPALDK--TPHNPTAKRSPIQAKNRDRSPQN 512
AP P PP++ + S TQP+ TP P AK Q K R P++
Sbjct: 365 APAPSPPASRRSVSRTTQPSTSSFATPTEPPAKN---QRKRRVVPPKS 409
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/96 (20%), Positives = 38/96 (39%)
Frame = +1
Query: 358 RREEQPRHPPCPRLQGRQAARKHNPLWTKLHTTPQPNGRRFKPRTETVLXXXXXXXXXXX 537
+R E+ RH R+ + T P P + T T +
Sbjct: 273 KRLEERRHLESQHEAKRRFGEESRSWPLPAETVPAP---KTTTTTTTTVPSTTTITTTTT 329
Query: 538 XMTLRFSNSTTSTKAPSVSTTHAVEVIQQEIQPDRK 645
T ++ +TT+T AP+ +T ++ QE++ ++K
Sbjct: 330 QRTTPYTTTTTTTAAPTTTTMKTIKYPIQEVKKEKK 365
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/96 (20%), Positives = 38/96 (39%)
Frame = +1
Query: 358 RREEQPRHPPCPRLQGRQAARKHNPLWTKLHTTPQPNGRRFKPRTETVLXXXXXXXXXXX 537
+R E+ RH R+ + T P P + T T +
Sbjct: 273 KRLEERRHLESQHEAKRRFGEESRSWPLPAETVPAP---KTTTTTTTTVPSTTTITTTTT 329
Query: 538 XMTLRFSNSTTSTKAPSVSTTHAVEVIQQEIQPDRK 645
T ++ +TT+T AP+ +T ++ QE++ ++K
Sbjct: 330 QRTTPYTTTTTTTAAPTTTTMKTIKYPIQEVKKEKK 365
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +3
Query: 381 PPLPPSTGETGSSETQPALDKTPHNPTAKRSPIQAKNRDRSPQNRQRQET 530
PP PP+ T P + P P+ SP+ + +PQ Q+ T
Sbjct: 502 PPAPPAIPSPAKLPTAPPPVEKPVTPSPSASPLPSPVSSPAPQLVQKPTT 551
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 375 APPPLPPSTGETGSSETQPALDKTPHNP 458
APPP PP +G G + QP KTP NP
Sbjct: 113 APPPPPPPSG-LGVA-PQPPRPKTPVNP 138
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 384 PLPPSTGETGSSETQPALDKTPHN-----PTAKRSPIQAKNRDRSPQNRQRQETQKENDL 548
PL P +GSS ++PA++ P + T+ S + + S + QR+ T K +
Sbjct: 1558 PLKPMISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEEATSSSPDIQRENTVKRRSM 1617
Query: 549 EI 554
++
Sbjct: 1618 DV 1619
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 384 PLPPSTGETGSSETQPALDKTPHN-----PTAKRSPIQAKNRDRSPQNRQRQETQKENDL 548
PL P +GSS ++PA++ P + T+ S + + S + QR+ T K +
Sbjct: 1580 PLKPMISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEEATSSSPDIQRENTVKRRSM 1639
Query: 549 EI 554
++
Sbjct: 1640 DV 1641
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 384 PLPPSTGETGSSETQPALDKTPHN-----PTAKRSPIQAKNRDRSPQNRQRQETQKENDL 548
PL P +GSS ++PA++ P + T+ S + + S + QR+ T K +
Sbjct: 1371 PLKPMISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEEATSSSPDIQRENTVKRRSM 1430
Query: 549 EI 554
++
Sbjct: 1431 DV 1432
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 384 PLPPSTGETGSSETQPALDKTPHN-----PTAKRSPIQAKNRDRSPQNRQRQETQKENDL 548
PL P +GSS ++PA++ P + T+ S + + S + QR+ T K +
Sbjct: 1678 PLKPMISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEEATSSSPDIQRENTVKRRSM 1737
Query: 549 EI 554
++
Sbjct: 1738 DV 1739
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 384 PLPPSTGETGSSETQPALDKTPHN-----PTAKRSPIQAKNRDRSPQNRQRQETQKENDL 548
PL P +GSS ++PA++ P + T+ S + + S + QR+ T K +
Sbjct: 1558 PLKPMISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEEATSSSPDIQRENTVKRRSM 1617
Query: 549 EI 554
++
Sbjct: 1618 DV 1619
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 384 PLPPSTGETGSSETQPALDKTPHN-----PTAKRSPIQAKNRDRSPQNRQRQETQKENDL 548
PL P +GSS ++PA++ P + T+ S + + S + QR+ T K +
Sbjct: 1580 PLKPMISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEEATSSSPDIQRENTVKRRSM 1639
Query: 549 EI 554
++
Sbjct: 1640 DV 1641
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 384 PLPPSTGETGSSETQPALDKTPHN-----PTAKRSPIQAKNRDRSPQNRQRQETQKENDL 548
PL P +GSS ++PA++ P + T+ S + + S + QR+ T K +
Sbjct: 1371 PLKPMISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEEATSSSPDIQRENTVKRRSM 1430
Query: 549 EI 554
++
Sbjct: 1431 DV 1432
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 384 PLPPSTGETGSSETQPALDKTPHN-----PTAKRSPIQAKNRDRSPQNRQRQETQKENDL 548
PL P +GSS ++PA++ P + T+ S + + S + QR+ T K +
Sbjct: 1678 PLKPMISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEEATSSSPDIQRENTVKRRSM 1737
Query: 549 EI 554
++
Sbjct: 1738 DV 1739
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 384 PLPPSTGETGSSETQPALDKTPHN-----PTAKRSPIQAKNRDRSPQNRQRQETQKENDL 548
PL P +GSS ++PA++ P + T+ S + + S + QR+ T K +
Sbjct: 1389 PLKPMISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEEATSSSPDIQRENTVKRRSM 1448
Query: 549 EI 554
++
Sbjct: 1449 DV 1450
>U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform c protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 372 TAPPPLPPSTGETGSSETQPALDKTPHNP 458
T P P+P G++ P + PHNP
Sbjct: 298 TRPQPMPQQLPSVGATFAHPLPHQAPHNP 326
>U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform a protein.
Length = 892
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 372 TAPPPLPPSTGETGSSETQPALDKTPHNP 458
T P P+P G++ P + PHNP
Sbjct: 394 TRPQPMPQQLPSVGATFAHPLPHQAPHNP 422
>U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform b protein.
Length = 864
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 372 TAPPPLPPSTGETGSSETQPALDKTPHNP 458
T P P+P G++ P + PHNP
Sbjct: 366 TRPQPMPQQLPSVGATFAHPLPHQAPHNP 394
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 384 PLPPSTGETGSSETQPALDKTPHN-----PTAKRSPIQAKNRDRSPQNRQRQETQKENDL 548
PL P +GSS ++PA++ P + T+ S + + S + QR+ T K +
Sbjct: 1349 PLKPMISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEEATSSSPDIQRENTVKRRSM 1408
Query: 549 EI 554
++
Sbjct: 1409 DV 1410
>AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 372 TAPPPLPPSTGETGSSETQPALDKTPHNP 458
T P P+P G++ P + PHNP
Sbjct: 298 TRPQPMPQQLPSVGATFAHPLPHQAPHNP 326
>AC006637-1|AAK85476.2| 342|Caenorhabditis elegans Hypothetical
protein F41B4.1 protein.
Length = 342
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/69 (23%), Positives = 26/69 (37%)
Frame = +2
Query: 278 ENQDTTKTAQTETGSDGLHIITPQPLIDERSNRATPPAPVYRGDRQLGNTTRSGQNSTQP 457
+NQ T ++ S + P + ATPPAP + T + ++T
Sbjct: 176 QNQSANSTLTRQSHSQSHTLPHQMPQYQQYHRHATPPAPAPQHQNNTNYYTENTTSTTSY 235
Query: 458 HSQTVADSS 484
H +V S
Sbjct: 236 HPTSVTYGS 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,482,332
Number of Sequences: 27780
Number of extensions: 409106
Number of successful extensions: 2366
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 1850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2324
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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