Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0548
         (639 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874...    31   1.0  
02_02_0695 - 13024639-13024800,13025425-13025607,13025635-13025679     29   3.1  
11_01_0568 - 4486870-4487084,4487510-4487941,4488264-4488267           28   7.2  
10_07_0172 + 13804803-13805293,13805423-13805537,13805766-138058...    28   7.2  

>02_05_0220 - 26885502-26885561,26885940-26886739,26887055-26887421,
            26887942-26888055,26888132-26888228,26889115-26889235,
            26889306-26889390,26889494-26889643,26889871-26889987,
            26890123-26890221,26890439-26890495,26890581-26890664,
            26890759-26890828,26891015-26891169,26891557-26892095,
            26892327-26892393,26892436-26892984,26893574-26893768,
            26894485-26894569,26895822-26896441,26897154-26897486,
            26897552-26897616,26897868-26897955,26898250-26898331,
            26898720-26898796,26899152-26899256,26899496-26899630,
            26900199-26900888,26901474-26902261,26902990-26904673
          Length = 2825

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +1

Query: 124  KISFKALCHSPTVYLNIGLEKNTKNANLKFLNMVEEKWPRWNLFSPMP 267
            K +++A+ H+   YLN       +   +   + + E+W RW LF   P
Sbjct: 2115 KHAYRAIVHTKPPYLNSIFLATQRPEKILKKSQLTERWARWELFMQYP 2162


>02_02_0695 - 13024639-13024800,13025425-13025607,13025635-13025679
          Length = 129

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +3

Query: 183 KKYKKRQLKIFKHGRRKMATVEFIFTDASKLVSNGNTGAAFYHP 314
           K +KK  +++ K   +K +  + +F    ++V   N G+A +HP
Sbjct: 56  KAFKKIHVRLVKELEKKFSGKDVVFDATRRIVRPLNKGSAVHHP 99


>11_01_0568 - 4486870-4487084,4487510-4487941,4488264-4488267
          Length = 216

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 372 ECIALISCLKFIMQHSINYSAIFSDCSSAIQAIS 473
           E  A +S L+    H I++ AI +DCS+ + A++
Sbjct: 158 EAEACLSALRITSLHGISHFAIETDCSALVGALT 191


>10_07_0172 +
           13804803-13805293,13805423-13805537,13805766-13805831,
           13805921-13806009,13806103-13806193,13806312-13806458,
           13806575-13806667,13806745-13806846,13806957-13807541,
           13808523-13808813,13808866-13808937
          Length = 713

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 273 LVSNGNTGAAFYHPNANHYKLHKLPPETSVFTGECIA 383
           L+S+ NT     H N     +HK   E S   GEC+A
Sbjct: 484 LISSNNTELPATHCNGRPSPVHKDIDEDSTMFGECLA 520


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,449,530
Number of Sequences: 37544
Number of extensions: 358132
Number of successful extensions: 703
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)