Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0547
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.43 
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    25   0.75 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    25   0.75 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.3  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   2.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.0  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   4.0  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   7.0  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 148 LYRVNFYKIIITRETKLRRWVQKRGNL 68
           LY  N+Y I++T   K R W +   NL
Sbjct: 75  LYCFNYYVIVVTTFYKRRTWTRLLKNL 101


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +3

Query: 321 LCRKRLSTNRDCTHSTGINILAKPRGCQLHLIRKFVTK*QLN-HFKINSKCTL 476
           LC+K  S +   T    I+   KP  C+L L+R F     LN H +++   ++
Sbjct: 82  LCKKAFSDSSTLTKHLRIHSGEKPYECKLCLLR-FSQSGNLNRHMRVHGAASM 133


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +3

Query: 321 LCRKRLSTNRDCTHSTGINILAKPRGCQLHLIRKFVTK*QLN-HFKINSKCTL 476
           LC+K  S +   T    I+   KP  C+L L+R F     LN H +++   ++
Sbjct: 338 LCKKAFSDSSTLTKHLRIHSGEKPYECKLCLLR-FSQSGNLNRHMRVHGAASM 389


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 301 LIYIMLFYLNAT*TCFLLMYLFCID 227
           +++I+ F    T   F L+Y++C D
Sbjct: 140 IVFILFFAQGLTSPIFNLVYVYCCD 164


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 484 YVNKSNLLQKKIV*IQSSLSLV 549
           Y+N+S L+  KIV   +S+ LV
Sbjct: 7   YINRSELITSKIVSFVNSIFLV 28


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +1

Query: 1   VFFFFFYNFILRCKFIRITIFHTNFLVFV 87
           +++F++ + +  C FI  T+ H  FL+ +
Sbjct: 258 IYYFYYMHLLFCCAFIIFTM-HLLFLLCI 285


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 406 NWQPRGLARILIPVLCVQSLLVDSRF 329
           NW PR +  I+   L +  LL+ +RF
Sbjct: 91  NWYPRLIIGIMNSTLNLIFLLIQTRF 116


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = +3

Query: 357 THSTGINILAKPRGCQLHLIRKFVTK*QLNHFKINSKCT 473
           TH  G  ++  P      ++   V    LNH ++ ++C+
Sbjct: 240 THHQGQLVVGLPAPTSSIMMHHLVNPQSLNHQEVKAECS 278


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,185
Number of Sequences: 336
Number of extensions: 3181
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)