Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0546
         (591 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...    25   1.8  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   9.8  

>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +2

Query: 140 IFATSLRPDSMSSLINPIKPEQPLKAMNDEIGEKKRGK-NSKQYLALEPKSKVN 298
           I A+  R    S  + P+  ++ LKA  +++  KKR K N ++Y+  +  +K++
Sbjct: 33  IDASPFRQWYESHYLLPLGKKRELKAGEEDVLSKKRTKSNLRKYVKRQKNAKID 86


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 275 LEPKSKVNECAFRCSKVSLTKRIPGRPLCECSRRHQIQI 391
           L  K  ++E  F C++ S+  R   +  CECS   QI +
Sbjct: 810 LPGKDVLDESQF-CNETSVRDRNCRQEFCECSHVLQIPL 847


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,672
Number of Sequences: 2352
Number of extensions: 10915
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)