Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0545
(404 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 33 0.059
AF192746-1|AAF08804.1| 401|Caenorhabditis elegans synapsin prot... 30 0.55
AC006743-3|AAF60504.2| 401|Caenorhabditis elegans Synapsin prot... 30 0.55
AC006743-2|AAM97971.1| 474|Caenorhabditis elegans Synapsin prot... 30 0.55
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z74033-9|CAN99687.1| 228|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z74033-8|CAA98470.1| 218|Caenorhabditis elegans Hypothetical pr... 29 1.7
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 29 1.7
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 28 2.2
AF000197-4|AAB52899.1| 274|Caenorhabditis elegans Hypothetical ... 28 2.9
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 28 2.9
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 28 2.9
Z92796-6|CAB63232.1| 405|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z70680-4|CAA94569.1| 274|Caenorhabditis elegans Hypothetical pr... 27 3.9
U40958-5|AAA81764.1| 654|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 27 5.1
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 27 5.1
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 27 5.1
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 27 5.1
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 27 5.1
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 27 5.1
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 27 6.8
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 27 6.8
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 6.8
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 26 9.0
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 26 9.0
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 26 9.0
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 26 9.0
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 26 9.0
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 33.5 bits (73), Expect = 0.059
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = -3
Query: 321 PPRCWRRACCPTCC--ASRPSRTRVAHRPVPAASRETAPPHTGAGAAVPP 178
PP C+ AC P C A PS + + P P PP G A PP
Sbjct: 115 PPPCFGPACPPPCFGPACAPSAPIIVNGPPPCFGPACPPPCFGPACAPPP 164
Score = 29.5 bits (63), Expect = 0.96
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = -3
Query: 321 PPRCWRRACCPTCC--ASRPSRTRVAHRPVPAASRETAPPHTGAGAAVPPGP 172
PP C+ AC P C A P + + P P PP G A PP P
Sbjct: 59 PPPCFGPACPPPCFGPACVPLAPIIVNGPPPCFGPACPPPCFGP-ACAPPAP 109
>AF192746-1|AAF08804.1| 401|Caenorhabditis elegans synapsin
protein.
Length = 401
Score = 30.3 bits (65), Expect = 0.55
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 249 HRPVPAASRETAPPHTGAGAAVPPGPH 169
H P PA PPH + +A PP H
Sbjct: 327 HGPAPAVPTRRLPPHPSSSSAAPPRGH 353
>AC006743-3|AAF60504.2| 401|Caenorhabditis elegans Synapsin protein
1, isoform a protein.
Length = 401
Score = 30.3 bits (65), Expect = 0.55
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 249 HRPVPAASRETAPPHTGAGAAVPPGPH 169
H P PA PPH + +A PP H
Sbjct: 327 HGPAPAVPTRRLPPHPSSSSAAPPRGH 353
>AC006743-2|AAM97971.1| 474|Caenorhabditis elegans Synapsin protein
1, isoform b protein.
Length = 474
Score = 30.3 bits (65), Expect = 0.55
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 249 HRPVPAASRETAPPHTGAGAAVPPGPH 169
H P PA PPH + +A PP H
Sbjct: 400 HGPAPAVPTRRLPPHPSSSSAAPPRGH 426
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.7 bits (61), Expect = 1.7
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -3
Query: 348 QRARARVRLPPRCWRRACCPTCCASRPSRTRVAHRP-VPAASRETAPP---HTGAGAAVP 181
+RA++R + PP RR+ + P R R + PA RE P + + + P
Sbjct: 362 KRAKSRSKSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSASKSP 421
Query: 180 PGPHRARA 157
P P RA++
Sbjct: 422 PAPKRAKS 429
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = -3
Query: 348 QRARARVRLPPRCWRRACCPTCCASRPSRTRVAHRPVPAASRETAPPHTGAGAAVPPGPH 169
+R+ + + PP RR + P R + + PA +R P A + PP P
Sbjct: 305 RRSPSASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSP--SASKSPPPAPK 362
Query: 168 RARA 157
RA++
Sbjct: 363 RAKS 366
>Z74033-9|CAN99687.1| 228|Caenorhabditis elegans Hypothetical
protein F38B7.2b protein.
Length = 228
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 243 PVPAASRETAPPHTGAGAAVPPGPHRARAAGVAVQES 133
P A R PP+ +A+PP H AR V+ S
Sbjct: 182 PTNPAHRSPPPPYNAQNSAIPPPYHNARHGRVSRSNS 218
>Z74033-8|CAA98470.1| 218|Caenorhabditis elegans Hypothetical
protein F38B7.2a protein.
Length = 218
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 243 PVPAASRETAPPHTGAGAAVPPGPHRARAAGVAVQES 133
P A R PP+ +A+PP H AR V+ S
Sbjct: 172 PTNPAHRSPPPPYNAQNSAIPPPYHNARHGRVSRSNS 208
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -3
Query: 273 RPSRTRVAHRPVPAASRETAPPHTGAGAAVPPGPHRARAAGVAV 142
R R A RPVPAA P+ AG G +A AV
Sbjct: 3000 RQQRAERASRPVPAAQPVAVNPNAPAGGEAAQGEGQAEQPAAAV 3043
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/64 (26%), Positives = 24/64 (37%)
Frame = -3
Query: 303 RACCPTCCASRPSRTRVAHRPVPAASRETAPPHTGAGAAVPPGPHRARAAGVAVQESVVA 124
R P + PSR V + PA+ T P A PP A+ A + +A
Sbjct: 284 RNAAPAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEPIA 343
Query: 123 STRT 112
+T
Sbjct: 344 QKKT 347
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/64 (26%), Positives = 24/64 (37%)
Frame = -3
Query: 303 RACCPTCCASRPSRTRVAHRPVPAASRETAPPHTGAGAAVPPGPHRARAAGVAVQESVVA 124
R P + PSR V + PA+ T P A PP A+ A + +A
Sbjct: 284 RNAAPAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEPIA 343
Query: 123 STRT 112
+T
Sbjct: 344 QKKT 347
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/64 (26%), Positives = 24/64 (37%)
Frame = -3
Query: 303 RACCPTCCASRPSRTRVAHRPVPAASRETAPPHTGAGAAVPPGPHRARAAGVAVQESVVA 124
R P + PSR V + PA+ T P A PP A+ A + +A
Sbjct: 284 RNAAPAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEPIA 343
Query: 123 STRT 112
+T
Sbjct: 344 QKKT 347
>AF000197-4|AAB52899.1| 274|Caenorhabditis elegans Hypothetical
protein T21G5.4 protein.
Length = 274
Score = 27.9 bits (59), Expect = 2.9
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = -1
Query: 254 LHTDLYQPPHVRRRHLIQELAQQFRQDLTEPELLESLFKSP*SHRLEPRTVTILTKAKT 78
L T+L QPP V+ ++ +A Q+RQ L L+ KS S R V+I+ + +T
Sbjct: 203 LATNLMQPPSVQMNEDVKGIASQYRQALPG---LKPPAKSAMSTGPNARRVSIIEQTQT 258
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 27.9 bits (59), Expect = 2.9
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 255 VAHRPVPAASRETAPPHTGAGAAVPPGPHRARAAGVAVQESVVASTRTSHRNNTY 91
+AH P P A T PP A P P +A AA A V + + + +T+
Sbjct: 266 LAHLPAPVAIYPTPPP---PPAPAPAAPQQASAAPAAPNVMPVCTEIAAEQRHTF 317
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 27.9 bits (59), Expect = 2.9
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 255 VAHRPVPAASRETAPPHTGAGAAVPPGPHRARAAGVAVQESVVASTRTSHRNNTY 91
+AH P P A T PP A P P +A AA A V + + + +T+
Sbjct: 626 LAHLPAPVAIYPTPPP---PPAPAPAAPQQASAAPAAPNVMPVCTEIAAEQRHTF 677
>Z92796-6|CAB63232.1| 405|Caenorhabditis elegans Hypothetical
protein H25K10.7 protein.
Length = 405
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 6 FFFL*RIL*NKHLFQCFPSCRKY*SFSFGKYCY 104
+ FL I+ N + ++CF C + F F KY Y
Sbjct: 87 YVFLDNIVSNYNWYECFQVCTEQECFKFHKYQY 119
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -3
Query: 294 CPTCCASRPSRTRVAHRPVPAASRETAPPHTGAGAAVPPGP 172
C C RP RP + + P TG GAA PGP
Sbjct: 149 CKPCPGGRPGPPGPPGRP--GSDGQPGRPATGGGAAPRPGP 187
>Z70680-4|CAA94569.1| 274|Caenorhabditis elegans Hypothetical
protein C25G4.6 protein.
Length = 274
Score = 27.5 bits (58), Expect = 3.9
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = -1
Query: 254 LHTDLYQPPHVRRRHLIQELAQQFRQDLTEPELLESLFKSP*SHRLEPRTVTILTKAKT 78
L T+L QPP V+ ++ +A Q+RQ L L+ KS S R V+I+ + +T
Sbjct: 203 LATNLMQPPSVQMNEDVKGIASQYRQALPG---LKPPAKSAMSTGPSARRVSIVEQTQT 258
>U40958-5|AAA81764.1| 654|Caenorhabditis elegans Hypothetical
protein F09F9.4 protein.
Length = 654
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 300 ACCPTCCASRPSRTRVAHRPVPAASR 223
AC TC + R R R + PVP S+
Sbjct: 327 ACSETCGSGRQRRVRFCNEPVPKRSK 352
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -3
Query: 276 SRPSRTRVAHRPVPAAS-RETAPPHTGAGAAVPPG 175
+ P +T R P +T PP TG VPPG
Sbjct: 763 TEPPKTTTEKRITPRTEVPKTVPPRTGPPMTVPPG 797
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 27.1 bits (57), Expect = 5.1
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = -3
Query: 321 PPRCWRRACCPTCCASRPSRTRVAHRPVPAASRETAPPHTGAGAAVPPGP 172
PP+ P C P T+ A P P S PP GA +V PGP
Sbjct: 1049 PPQSNNNKSPPQACLFNPF-TQSAPSPAPPPSTIPLPPTRGA--SVGPGP 1095
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 27.1 bits (57), Expect = 5.1
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = -3
Query: 321 PPRCWRRACCPTCCASRPSRTRVAHRPVPAASRETAPPHTGAGAAVPPGP 172
PP+ P C P T+ A P P S PP GA +V PGP
Sbjct: 1043 PPQSNNNKSPPQACLFNPF-TQSAPSPAPPPSTIPLPPTRGA--SVGPGP 1089
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 27.1 bits (57), Expect = 5.1
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = -3
Query: 321 PPRCWRRACCPTCCASRPSRTRVAHRPVPAASRETAPPHTGAGAAVPPGP 172
PP+ P C P T+ A P P S PP GA +V PGP
Sbjct: 1049 PPQSNNNKSPPQACLFNPF-TQSAPSPAPPPSTIPLPPTRGA--SVGPGP 1095
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 27.1 bits (57), Expect = 5.1
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = -3
Query: 321 PPRCWRRACCPTCCASRPSRTRVAHRPVPAASRETAPPHTGAGAAVPPGP 172
PP+ P C P T+ A P P S PP GA +V PGP
Sbjct: 1043 PPQSNNNKSPPQACLFNPF-TQSAPSPAPPPSTIPLPPTRGA--SVGPGP 1089
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 27.1 bits (57), Expect = 5.1
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = -3
Query: 321 PPRCWRRACCPTCCASRPSRTRVAHRPVPAASRETAPPHTGAGAAVPPGP 172
PP+ P C P T+ A P P S PP GA +V PGP
Sbjct: 1043 PPQSNNNKSPPQACLFNPF-TQSAPSPAPPPSTIPLPPTRGA--SVGPGP 1089
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 27.1 bits (57), Expect = 5.1
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = -3
Query: 321 PPRCWRRACCPTCCASRPSRTRVAHRPVPAASRETAPPHTGAGAAVPPGP 172
PP+ P C P T+ A P P S PP GA +V PGP
Sbjct: 1049 PPQSNNNKSPPQACLFNPF-TQSAPSPAPPPSTIPLPPTRGA--SVGPGP 1095
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 26.6 bits (56), Expect = 6.8
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -3
Query: 291 PTCCASRPSRTRVAHRPVPAASRETAPPHTGAGAAVPPGP 172
PT AS + T RP PA T AA PP P
Sbjct: 673 PTPEASSSTGTSAPARPPPARPEAPKKDETAVDAAAPPRP 712
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 26.6 bits (56), Expect = 6.8
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = -3
Query: 270 PSRTRVAHRPVPAASRETAPPHTGAGAAVPPGPHRARAAGVAVQESVVAST 118
P+ + A P+ A + + A T A P P AAG SV T
Sbjct: 502 PAASEPAPAPIEAPATDAATLETAPAPAAEPAPAAEAAAGYDAPSSVPEET 552
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 26.6 bits (56), Expect = 6.8
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -3
Query: 288 TCCASRPSRTRVAHRPVPAASRETAPPHTGAGAAVP 181
T S P+++ + P P SR PP A + +P
Sbjct: 431 TITLSAPAKSPATYGPAPEPSRPAVPPVAPAPSVIP 466
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 321 PPRCWRRACCPTCCASRPSRTRVAHRPVPAASRETAPP 208
PP+ +A P A P A PVPA + APP
Sbjct: 187 PPKPVEQAAPPPPPAPMPVPVEKAPEPVPAPVEQIAPP 224
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 26.2 bits (55), Expect = 9.0
Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = -3
Query: 291 PTCCASRPSRTRVAHRPVPAASRETAPPHTGA---GAAVPPGPHRARAAGVAVQESVVAS 121
P +S T + P P S + P TGA G++ G A +V S V +
Sbjct: 1492 PIASSSTMGSTAGSSSPQPTVSSTSVPSSTGATSSGSSTTVGSSTVGATQTSVSSSTVPN 1551
Query: 120 TRTSHRNNTYQS*NFNTYDSLENTGI 43
T ++ T S + +T S I
Sbjct: 1552 TGSTGSTVTNPSTSSSTSGSSSTQSI 1577
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -3
Query: 243 PVPAASRETAPPHTGAGAAVPPGPHRARAAGVAVQESVV 127
P P S T PP + AV P P G Q SV+
Sbjct: 24 PPPNDSNRTTPPPSSEETAVVPEPVMPPRKGSVAQTSVI 62
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 26.2 bits (55), Expect = 9.0
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = -3
Query: 324 LPPRCWRRACCPTCCASRPSRTRVAHRPVPAASRETAPPHTGAGAAVPPG 175
+PP PT ++ P H+P+ A AP T AG PG
Sbjct: 54 MPPFMGMPPMPPTSSSAMPFGMSSDHQPMSAGPAAAAPGATTAGGPGTPG 103
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 26.2 bits (55), Expect = 9.0
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 294 CPTCCASRPSRTRVAHRPVPAASRETAPPHTGAGAAVPPGP 172
CP A A P PA + P G G A PPGP
Sbjct: 175 CPPGPAGPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPGP 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,127,875
Number of Sequences: 27780
Number of extensions: 97996
Number of successful extensions: 599
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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