Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0544
(666 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56371| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_54972| Best HMM Match : Syntaxin (HMM E-Value=1.6e-05) 35 0.052
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_27802| Best HMM Match : Filament (HMM E-Value=0.2) 33 0.21
SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34) 33 0.21
SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28) 31 0.64
SB_2860| Best HMM Match : IncA (HMM E-Value=0.41) 31 0.64
SB_57119| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=1.4e-20) 31 0.84
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_17228| Best HMM Match : DivIVA (HMM E-Value=2.5) 30 1.9
SB_41266| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 29 3.4
SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 29 3.4
SB_56992| Best HMM Match : Copper-bind (HMM E-Value=0.82) 29 4.5
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 29 4.5
SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_20308| Best HMM Match : TP2 (HMM E-Value=3.6) 29 4.5
SB_56974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_57594| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_20706| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_17699| Best HMM Match : CsbD (HMM E-Value=0.014) 28 5.9
SB_57911| Best HMM Match : Drf_FH1 (HMM E-Value=2.3) 28 5.9
SB_52853| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_35785| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_19137| Best HMM Match : Pox_A_type_inc (HMM E-Value=3e-05) 28 5.9
SB_9235| Best HMM Match : TolA (HMM E-Value=0.33) 28 5.9
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 28 5.9
SB_54232| Best HMM Match : Pkinase (HMM E-Value=1.1e-39) 28 7.9
SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023) 28 7.9
SB_22230| Best HMM Match : CARD (HMM E-Value=3.8e-17) 28 7.9
SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11) 28 7.9
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 28 7.9
>SB_56371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1035
Score = 36.7 bits (81), Expect = 0.017
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +3
Query: 303 DEKTKHELEDLMADVKKTANKVRGKLKHIEQNIGTR--GALEQIVGRSQDKKDPTFNSLP 476
DE+TK + D VK+T VR K+K +Q + R +++ R + K +
Sbjct: 410 DEETKQHVRD---KVKQTKQHVRDKVKQTKQRVRDRVKQTKQRVRDRVKQTKQRVRDKAK 466
Query: 477 QVR-RGDDRVQSTQTDYRDRCKSRIQR 554
Q + R DR++ + RDR K R QR
Sbjct: 467 QTKQRVRDRIKQRKQRVRDRVKQRKQR 493
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 35.5 bits (78), Expect = 0.039
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 13/147 (8%)
Frame = +3
Query: 228 DDRQDSGEREEVKKKHSAILSAPQSDEKTK--------HELEDLMADVKKTANKVRGKLK 383
DD ++ E +E K S ++A + D+K K E ED + + ++ K +GK
Sbjct: 737 DDEEEESEEDESNKPSSRQVTAKKEDKKGKKKKKEEEEEEEEDQEEEDEDSSGKKKGKKD 796
Query: 384 HIEQNIGTRGALEQIVGRSQDKKDPTFNSLPQVRRGDDRVQSTQTDYRDRC-----KSRI 548
E G A +Q GR + K+ N + R ++ D D K +
Sbjct: 797 SSESEKGK--AKKQRKGREKKGKEIKKNDDEEEERDEEEDDEEDDDEEDDSKKASGKGKK 854
Query: 549 QRQLEITGRATTDDELEEMLEQGNSAR 629
+ + G++ DDE EE E G +
Sbjct: 855 GQDNKKKGKSKKDDEDEEAEEDGEKTK 881
>SB_54972| Best HMM Match : Syntaxin (HMM E-Value=1.6e-05)
Length = 175
Score = 35.1 bits (77), Expect = 0.052
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 181 GGFMDEFFSEVEEIREMIDKIQANVKK*RKS 273
G FMD+FF + IRE IDKI +V++ +K+
Sbjct: 71 GEFMDDFFQQTANIRENIDKIAQDVERVKKA 101
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Frame = +3
Query: 255 EEVKKKHSAILSAPQSDE----KTKHELEDLMADVKKTANKVRGK-LKHIEQNIGTRGAL 419
E VKK HSA+LS+ D+ KT E+ED++ + G+ + IE N+ A+
Sbjct: 96 ERVKKAHSAVLSSAVPDQAGKSKTSEEVEDMLESGNPSIFTSDGEMIDRIEFNV--EQAV 153
Query: 420 EQIVGRSQD-KKDPTFNS 470
+ + D KK T+ S
Sbjct: 154 DYVQSAKTDTKKALTYQS 171
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Frame = +3
Query: 228 DDRQDSGEREEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIGT 407
DDR +GE+ + S +SD+ + E E+ + KK K +GK ++ GT
Sbjct: 191 DDRDGNGEQSK---------SGSESDDDEEEEEEEEKEE-KKLTQKKKGKTPEQKKTPGT 240
Query: 408 RGALEQIVGRSQDKKDPTFNSLPQVRRGD-DRVQSTQTDYRDRCKSRIQRQLEITGRATT 584
+ A + + +K+ + + +G+ + Q+T+ + + + ++ ++Q ++ A
Sbjct: 241 KKAASKQRHPTDEKRKDGQEKVEEKEKGEVEDAQTTEEEEKQKEEAERKKQEKLEKLAKK 300
Query: 585 DDELEEMLEQ 614
+EL+E Q
Sbjct: 301 KEELKERKRQ 310
>SB_27802| Best HMM Match : Filament (HMM E-Value=0.2)
Length = 528
Score = 33.1 bits (72), Expect = 0.21
Identities = 32/131 (24%), Positives = 60/131 (45%)
Frame = +3
Query: 237 QDSGEREEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIGTRGA 416
Q+ E E+K KHS + + + HE++ + K +V+ KLK E+ + A
Sbjct: 119 QEKEEILELKNKHSDSIKLAEDTNRLLHEVQRKNDSLAKDMKRVKEKLKAKEKEL---SA 175
Query: 417 LEQIVGRSQDKKDPTFNSLPQVRRGDDRVQSTQTDYRDRCKSRIQRQLEITGRATTDDEL 596
+ + + Q NS D+++ + + R++ +RI +LE R ++L
Sbjct: 176 MAEKMSYDQ------INSFNLAANCDEKLMKLEREIREK-TARI-TELEEDSRIEM-EQL 226
Query: 597 EEMLEQGNSAR 629
+E L Q SA+
Sbjct: 227 QEKLNQERSAK 237
>SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)
Length = 758
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/106 (23%), Positives = 45/106 (42%)
Frame = +3
Query: 306 EKTKHELEDLMADVKKTANKVRGKLKHIEQNIGTRGALEQIVGRSQDKKDPTFNSLPQVR 485
E+ K ELE A++ + V+G H+E + A + D + + L V
Sbjct: 181 EQPKEELEMPSAEIPPGGSTVKGSSSHVEIEQDSTTASTSRLQSDSDLNSKSLSELTDV- 239
Query: 486 RGDDRVQSTQTDYRDRCKSRIQRQLEITGRATTDDELEEMLEQGNS 623
+ + S T +D KS+I+ + T DD+ ++ + NS
Sbjct: 240 QDTQHIDSDSTGVKD--KSQIEEEFYDTEEGLYDDDNDQFMMYLNS 283
>SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28)
Length = 552
Score = 31.5 bits (68), Expect = 0.64
Identities = 26/103 (25%), Positives = 48/103 (46%)
Frame = +3
Query: 261 VKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIGTRGALEQIVGRS 440
V KK S I + Q E+ + E + L D+K+ + + + IEQN L++
Sbjct: 171 VAKKESQIQALQQETERLRSEFQRLETDIKERTDDLEQRRSSIEQNNKEYSELKR----- 225
Query: 441 QDKKDPTFNSLPQVRRGDDRVQSTQTDYRDRCKSRIQRQLEIT 569
K+D N+ ++ R + ++ T R+ S+ +R L+ T
Sbjct: 226 --KRDELTNTRKELWRQEAAMEQTINTAREEL-SKSERGLKGT 265
>SB_2860| Best HMM Match : IncA (HMM E-Value=0.41)
Length = 417
Score = 31.5 bits (68), Expect = 0.64
Identities = 24/130 (18%), Positives = 58/130 (44%), Gaps = 5/130 (3%)
Frame = +3
Query: 267 KKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIGTRGALEQIVGRSQD 446
+K +LS ++ K E+L D ++ +++ + ++++ + +E+ + +D
Sbjct: 138 EKRERLLS--DNEAKVMRLKEELQRDHERKMTELKEAARRMKEDCAHQVEMER--SKVRD 193
Query: 447 KKDPTFNSLPQVRRGDDRVQSTQTDY-----RDRCKSRIQRQLEITGRATTDDELEEMLE 611
+ + Q+ + R Q + ++ R+ K ++ Q E+ ELE LE
Sbjct: 194 LEQQKQRLVEQLYAAEKRYQDKENEFMTHKERELSKPEVKLQSELDFLRVEKAELERKLE 253
Query: 612 QGNSARFHFK 641
N ++ H+K
Sbjct: 254 SSNKSKIHYK 263
>SB_57119| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=1.4e-20)
Length = 1423
Score = 31.1 bits (67), Expect = 0.84
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +3
Query: 234 RQDSGEREEVKKKHSAILS--APQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIGT 407
++DS +R+EVK KH LS + QS + K +E + D + T + K + T
Sbjct: 529 KRDS-KRDEVKNKHEGHLSFNSGQSSKMVKKIMEK-VGDDESTKGATKQLNKPLIDQTDT 586
Query: 408 RGALEQIVGR 437
+G ++Q+ G+
Sbjct: 587 KGIIKQVAGK 596
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 30.3 bits (65), Expect = 1.5
Identities = 26/131 (19%), Positives = 52/131 (39%)
Frame = +3
Query: 249 EREEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIGTRGALEQI 428
+ ++ KKK L+ S HEL+ + N ++ K+ +E ++ + A + I
Sbjct: 861 QADDDKKKLEETLATRHSTANKVHELQVQLKAKDDKVNNLQAKISKLEADMNEQQASKDI 920
Query: 429 VGRSQDKKDPTFNSLPQVRRGDDRVQSTQTDYRDRCKSRIQRQLEITGRATTDDELEEML 608
+QD+ + L R + ++Q R++ I + +ELE +
Sbjct: 921 T--AQDRVSELKDLLKVSRESESKLQERIESLREKITG--LELAAINDATASKEELESAV 976
Query: 609 EQGNSARFHFK 641
E+ A K
Sbjct: 977 EEKAKAETKLK 987
>SB_17228| Best HMM Match : DivIVA (HMM E-Value=2.5)
Length = 160
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +3
Query: 255 EEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTAN---KVRGKLKHIEQNIGTRGALEQ 425
EE+K K +A+ AP+S + K + ++L + K+ ++ +VRGK A +
Sbjct: 49 EEIKDKVNAVGVAPRSLVEVKDKWKNLFSQAKRESSEFKRVRGKTGGGPAPKPPSAATAK 108
Query: 426 IVGRSQDKKDPTFNSLPQVRRGD 494
I+ QD P+F+ L GD
Sbjct: 109 IIEEYQD--TPSFSGLIGFETGD 129
>SB_41266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 29.5 bits (63), Expect = 2.6
Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 2/126 (1%)
Frame = +3
Query: 216 RNTRDDRQDSGEREEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQ 395
R+TRD + R+ +HS P++ T+ D ++ N + +
Sbjct: 165 RDTRDPVNNRDTRDPRHPRHSQQTETPETQSTTETSETQSSTDTREPVNN-----RDTRE 219
Query: 396 NIGTRGALEQIVGRSQDKKDPTFNSLPQ--VRRGDDRVQSTQTDYRDRCKSRIQRQLEIT 569
+ R + + ++D +DP N Q + D R D RD +R R +
Sbjct: 220 TVNNRDTRDTV--NNRDTRDPVNNRDTQDPINNRDTRDPVNNRDTRDPINNRDTRD-TVN 276
Query: 570 GRATTD 587
R T D
Sbjct: 277 NRDTRD 282
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/138 (17%), Positives = 56/138 (40%)
Frame = +3
Query: 216 RNTRDDRQDSGEREEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQ 395
+ DD REE+++ + + + ++ + ELE+++ + K ++R K++H+
Sbjct: 664 KTDEDDLDADAVREELEQVRKDKIESEKVAQELRMELEEVVRNRDKIVGELREKMQHVVS 723
Query: 396 NIGTRGALEQIVGRSQDKKDPTFNSLPQVRRGDDRVQSTQTDYRDRCKSRIQRQLEITGR 575
L + +KD Q + + Q+ Q +R + G
Sbjct: 724 EKERSEILNDKYQKLVQEKDKLIEE--QAQDLEKSKQANQAIKDERVALEASYAEAVMGS 781
Query: 576 ATTDDELEEMLEQGNSAR 629
T E + +L++ + A+
Sbjct: 782 ERTMKEKDALLDELDQAK 799
>SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/95 (20%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Frame = +3
Query: 264 KKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIGTRGAL-------- 419
KKK +A + DEKT H ++ +K+ +GK K+ +++ ++
Sbjct: 327 KKKDQT--NAAKKDEKTMHAENTIIGTAEKSVEDKKGKKKNYNKSVEREDSMAMKEELHS 384
Query: 420 ---EQIVGRSQDKKDPTFNSLPQVRRGDDRVQSTQ 515
+ ++++KKD T N+ + + D+ + +
Sbjct: 385 KGTNTVKNKTKNKKDKTKNNKDKTKENKDKTKENK 419
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 29.1 bits (62), Expect = 3.4
Identities = 28/129 (21%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 237 QDSGEREEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIGTRGA 416
+D E+ E +++ SA LS+ KH+LE ++D+K+ ++ LK +E+ +
Sbjct: 911 KDMLEQLEDEEEASAELSS------VKHKLEGEISDLKQDIEELDATLKKVEEEGKQKDK 964
Query: 417 -LEQIVGRSQDKKDPTFNSLPQVRRGDDRVQSTQTDYRDRCKSRIQRQLEITGRATTDDE 593
+EQ+ Q + + ++ ++++ +V+ +T+ D + + Q +++ T +
Sbjct: 965 NIEQLNEELQQQDE----AIAKLQKAKKQVEDERTELEDHLQ---EEQNKVSHLTKTKLK 1017
Query: 594 LEEMLEQGN 620
LE L++ N
Sbjct: 1018 LESTLDEVN 1026
>SB_56992| Best HMM Match : Copper-bind (HMM E-Value=0.82)
Length = 1642
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 3/127 (2%)
Frame = +3
Query: 234 RQDSGEREEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIGTRG 413
R DS + + + + + DE T H L + + + RG + +
Sbjct: 979 RNDSAKPSSPRLEGRPLFDLQEYDELTNHCLSSDADNNRDILDSKRGFENEVPAQ-DSNS 1037
Query: 414 ALEQIVGRSQDKKDPTF---NSLPQVRRGDDRVQSTQTDYRDRCKSRIQRQLEITGRATT 584
E ++ QD D T N +P+V DD+V ++ D + +S E + A
Sbjct: 1038 CDEDVIDSKQDVFDKTKLLENKVPKVSCSDDKVTDSKRDVFEMKESFENEAPESSSSAEV 1097
Query: 585 DDELEEM 605
+ +EM
Sbjct: 1098 SEADQEM 1104
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +3
Query: 261 VKKKHSAILSAPQSDEKTKHE-LEDLMADVKKTANKVRGKLKHIEQNIGTRGALEQIVGR 437
++K S I+ A + E+ E LE ++ DV+K ++ LKH + T+G ++ +
Sbjct: 658 LEKARSGIVEAEEGMERVNPEKLETMVKDVRKRTKEIVKSLKHFLKE--TKGEVDIPLPP 715
Query: 438 SQDKKDPTFNSLPQ 479
+ + +P +P+
Sbjct: 716 APEVSEPEPEVVPE 729
>SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1553
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/78 (20%), Positives = 37/78 (47%)
Frame = +3
Query: 222 TRDDRQDSGEREEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNI 401
TR + E +++++ L Q+ + E+E+ ++++K A++ +L+H E I
Sbjct: 1446 TRYSSRTRASIERIRQQYEDCLQDVQTRNNSVVEMENKLSEMKSKADEYTDQLEHCEDTI 1505
Query: 402 GTRGALEQIVGRSQDKKD 455
+ + D+KD
Sbjct: 1506 REMNLKIHSLESNIDQKD 1523
>SB_20308| Best HMM Match : TP2 (HMM E-Value=3.6)
Length = 318
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 118 APLTCPSSSFTENHAPSKRFFSLHNPIQRYFSNK 17
AP+ SSF + P +RF S +P +R+ S++
Sbjct: 171 APINISRSSFLISEDPKERFLSSEDPKERFLSSE 204
>SB_56974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 785
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Frame = +3
Query: 294 PQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIGTRGALEQIVGRSQDKKDPTFNSL 473
P+ K K DL ++ T K R +++ I + +I S+ K
Sbjct: 598 PRKSSKAKRRSRDLDSEEHVTCTKHRV----VDERIDEMAEMAEIETDSKPKIGSEKKGA 653
Query: 474 PQVRRGDDRVQSTQTDYRDRCKSRIQRQLEITGRATTDDEL-EEMLEQGNSARFHFKGLS 650
V + + V S + + I+ ++ I+ + T D + EE +GNS + L+
Sbjct: 654 GGVTK-IEYVTSLEEQSTKETREGIEHRVRISSKRTKDCAVSEEKCSEGNSEKNELDCLA 712
Query: 651 WRPN 662
W+ N
Sbjct: 713 WKNN 716
>SB_57594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1386
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/92 (20%), Positives = 40/92 (43%)
Frame = +3
Query: 306 EKTKHELEDLMADVKKTANKVRGKLKHIEQNIGTRGALEQIVGRSQDKKDPTFNSLPQVR 485
E+T ++E +++T K+ IEQ TRG +EQ G+ + + + ++
Sbjct: 746 EQTHGKIEQTHGKIEQTHGKIEQTHGKIEQ---TRGKIEQTRGKIEQTRGKIEQTHGKIE 802
Query: 486 RGDDRVQSTQTDYRDRCKSRIQRQLEITGRAT 581
+ +++ T +R +R + G T
Sbjct: 803 QTHGKIEQTHGKIEQTLTARAERNRKPPGVIT 834
>SB_20706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 588
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 237 QDSGEREEVKKKHSAILSAPQSDEKT-KHELEDLMADVKK 353
+D E EEVK K S P+++EKT +H+ E+++ ++ +
Sbjct: 135 KDEKEEEEVKPKPIQQESQPETEEKTEQHKEEEVVIELSE 174
>SB_17699| Best HMM Match : CsbD (HMM E-Value=0.014)
Length = 178
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/92 (20%), Positives = 40/92 (43%)
Frame = +3
Query: 306 EKTKHELEDLMADVKKTANKVRGKLKHIEQNIGTRGALEQIVGRSQDKKDPTFNSLPQVR 485
E+T ++E +++T K+ IEQ TRG +EQ G+ + + + ++
Sbjct: 76 EQTHGKIEQTHGKIEQTHGKIEQTHGKIEQ---TRGKIEQTRGKIEQTRGKIEQTHGKIE 132
Query: 486 RGDDRVQSTQTDYRDRCKSRIQRQLEITGRAT 581
+ +++ T +R +R + G T
Sbjct: 133 QTHGKIEQTHGKIEQTLTARAERNRKPPGVIT 164
>SB_57911| Best HMM Match : Drf_FH1 (HMM E-Value=2.3)
Length = 169
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +1
Query: 514 RPTTETAARAGYRDNSRSRAAPPPTMNLRKCSNKATRPVFTSR 642
RP +E+ R Y D S P P + R+ S +P + R
Sbjct: 70 RPPSESRPRPPYDDRRTSETRPRPPYDERRVSENRPKPPYDDR 112
>SB_52853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = +3
Query: 225 RDDRQDSGEREEVKKKHSA----ILSAPQSD-EKTKHELEDLMADVKKTANKVRGKL 380
R DR +SG++ H A + P D +T+H+LE + D++KT ++ +L
Sbjct: 2 RRDRPESGKKPRPVSAHLAKARTVKPPPAFDTSRTRHQLELIERDLRKTTKGLQDRL 58
>SB_35785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1089
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +3
Query: 255 EEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANK 365
EE+K K +A+ APQS + K + E+L++ K+ ++
Sbjct: 47 EEIKDKVNAVGVAPQSLVEVKDKWENLLSQAKRETSE 83
>SB_19137| Best HMM Match : Pox_A_type_inc (HMM E-Value=3e-05)
Length = 462
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/70 (25%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +3
Query: 228 DDRQDSGEREEVKKKHSAILSAPQSDEKTKHELEDLMADVK-KTANKVR---GKLKHIEQ 395
++ Q+ G+RE+++ + LS + ++K KH++EDL + + KTA + +K I++
Sbjct: 129 ENSQEWGKREKLESEK---LSLERENKKLKHQIEDLESLLSHKTARATKLLDTDMKEIQK 185
Query: 396 NIGTRGALEQ 425
+ + A+ +
Sbjct: 186 KLDEKNAVSR 195
>SB_9235| Best HMM Match : TolA (HMM E-Value=0.33)
Length = 579
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +3
Query: 216 RNTRDDRQDSGEREEVKKKHSAILSAPQSDE--KTKHELEDLMADVKKTANKVRG--KLK 383
R T + + R +K + SA ++ K E +ADVK TAN++ G KL+
Sbjct: 371 RKTAEKAEKIKARRAARKAEARGSSAALTERLNKASENREKHLADVKSTANRLAGSSKLQ 430
Query: 384 HIEQNIGTRGALEQ 425
+E R L Q
Sbjct: 431 AMEGEACARAELRQ 444
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Frame = +3
Query: 219 NTRDDRQDSGEREEVKKKHSAILSAPQSDEKTKH-----ELEDLMADVKKTANKVRGKLK 383
N ++ Q + + EE +K+ A L E+ +H E +A+++KT +RG+++
Sbjct: 1173 NLQEQLQKAEKDEETRKEEVAKLECDLKREQNEHDQLGEEARQKIAELEKTVLSLRGEVE 1232
Query: 384 HIEQNIGTRGALE-QIVGRSQD 446
+ + A E Q +G ++D
Sbjct: 1233 RWKMEVDMYVAGESQRIGSNED 1254
>SB_54232| Best HMM Match : Pkinase (HMM E-Value=1.1e-39)
Length = 1123
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +3
Query: 285 LSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIGTRGALEQIVGRSQDKKDPTF 464
+S ++ +H +VK T +++ +H + G G + VGR D+ DP+
Sbjct: 376 VSCKMDEKAVRHGKRKGEEEVKLTRSRLEIMKEHERRRRGLIGDGKGGVGR--DEGDPSS 433
Query: 465 NSLPQVRRGDDRVQSTQTDYRDRCKS 542
+ V R Q T +RD+ KS
Sbjct: 434 GQVAVVNAQQGRDQGTAFIHRDKGKS 459
>SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1293
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = +3
Query: 381 KHIEQNIGTRGALEQIVGRSQDKKDPTFNSLPQVRRGDDRVQSTQTDYRDRCKSRIQRQL 560
K I+Q T+ L+ +S D+KDP + RRG ++ D R + S +
Sbjct: 847 KKIKQGQETKEDLKDPKKKSSDRKDPLSRHHTEERRGSVGSKADIEDNRRKRSSSRESDR 906
Query: 561 EITGRATTDDELEE 602
R D+E EE
Sbjct: 907 YSIKRRRHDNEQEE 920
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 499 EYNPRRPTTETAARAGYRDNSRSRAAPPP 585
E P P + A+ +RDN + + APPP
Sbjct: 1588 ETQPETPIHQAASPFVFRDNQQPKPAPPP 1616
>SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023)
Length = 873
Score = 27.9 bits (59), Expect = 7.9
Identities = 24/122 (19%), Positives = 51/122 (41%)
Frame = +3
Query: 255 EEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIGTRGALEQIVG 434
E+ ++ +S D K E ++ A K +K + L ++N + ++
Sbjct: 476 EQTNYSQASKISEHSEDVVVKQE--NVAALTKAVVSKEQQLLNLDQKNKEKEVVILEMNK 533
Query: 435 RSQDKKDPTFNSLPQVRRGDDRVQSTQTDYRDRCKSRIQRQLEITGRATTDDELEEMLEQ 614
R Q+KK+ N + D +++S Q+ + D C+ + T + +E++E
Sbjct: 534 RIQEKKETITNMEKNISDKDKQLRSLQSRFVDNCRLGESSKDHQKSEETVKKQKKEIMEL 593
Query: 615 GN 620
N
Sbjct: 594 EN 595
>SB_22230| Best HMM Match : CARD (HMM E-Value=3.8e-17)
Length = 555
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 249 EREEVKKKHSAILSAPQSDEKT-KHELEDLMADVKKTANKVR 371
E EE+K H A++ QSD T E++ L KK A K++
Sbjct: 158 ELEELKSMHQAMIKQFQSDFSTMSFEIKQLKEARKKDAKKLK 199
>SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11)
Length = 672
Score = 27.9 bits (59), Expect = 7.9
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 14/125 (11%)
Frame = +3
Query: 276 SAILSAPQSDEKTKHELEDLMADVKKTANKV--RGKLKHIEQNIGTRG------ALEQIV 431
S+I A SD+ EL D + ++KK + R L +++G+ G A +IV
Sbjct: 5 SSIAGAQGSDDIQDDELGDELGEIKKIPVEYPQRRTLTSSLRSVGSIGKKKNGAAKGKIV 64
Query: 432 GRSQDKKDP---TFNS-LPQVRRGDD--RVQSTQTDYRDRCKSRIQRQLEITGRATTDDE 593
+S + F+S ++RR + R Q D R + ++QRQ +I R + E
Sbjct: 65 SKSDSLRSALSFDFDSETEKIRREYEVFRAQQANRDSRTPKRDKVQRQFKIF-REAKEQE 123
Query: 594 LEEML 608
++++L
Sbjct: 124 IQDLL 128
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/95 (21%), Positives = 38/95 (40%)
Frame = +3
Query: 234 RQDSGEREEVKKKHSAILSAPQSDEKTKHELEDLMADVKKTANKVRGKLKHIEQNIGTRG 413
RQDS E ++ K S ++ PQ E + + A ++ K + + +
Sbjct: 287 RQDSTEMYDIGDKPSTVVPLPQGAEVKLQDKRRQFETLDYKAQRLHSSGKSFDSSANSI- 345
Query: 414 ALEQIVGRSQDKKDPTFNSLPQVRRGDDRVQSTQT 518
L R++ K P + +R DD ++ + T
Sbjct: 346 PLSTSTRRAESKPRPKSEAFNYLRYQDDGIEKSVT 380
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,567,968
Number of Sequences: 59808
Number of extensions: 284107
Number of successful extensions: 1432
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1423
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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