Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0544
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    27   0.53 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.7  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            23   8.7  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   8.7  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 27.1 bits (57), Expect = 0.53
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +1

Query: 469  LSRKFVEVMTEYNPRRPTTETAARAGYRDNSRSRAAPPPTMNLRKCSNKA 618
            L  +  E+    N RR  +  AARA  R+  R+   P P  + R  + +A
Sbjct: 1033 LEARRAEIRRARNDRRNASRRAARARQRELQRAGRPPSPPPSPRTAARRA 1082


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 294  ALIRWHCAFSSLLHVRLNLVYHLSYFF 214
            +++R HCA  S +HVR N    + + +
Sbjct: 3338 SVLREHCATDSSVHVRRNANSKIDFLY 3364


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 500 SVITSTNLRERVECWVFLILRSADDL 423
           ++ TS    +R EC+VF+  + A D+
Sbjct: 112 NLTTSNGTEDRHECFVFISNKLASDI 137


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 584 GGGAARDLELSLYPALAAVS 525
           GGGAA D+E++  P   +V+
Sbjct: 12  GGGAANDVEMNALPRNQSVN 31


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,163
Number of Sequences: 2352
Number of extensions: 8651
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)