Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0543
         (628 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001859-1|AAN71622.1|  618|Drosophila melanogaster RH65876p pro...    29   6.8  
AY051804-1|AAK93228.1|  637|Drosophila melanogaster LD31969p pro...    29   6.8  
AE013599-2822|AAM68436.1|  592|Drosophila melanogaster CG15118-P...    29   6.8  
AE013599-2821|AAM68435.1|  637|Drosophila melanogaster CG15118-P...    29   6.8  
AE013599-2820|AAF57600.2|  637|Drosophila melanogaster CG15118-P...    29   6.8  
AE013599-2819|AAG22258.2|  637|Drosophila melanogaster CG15118-P...    29   6.8  

>BT001859-1|AAN71622.1|  618|Drosophila melanogaster RH65876p
           protein.
          Length = 618

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 508 DARRHTQRASHSPPILR*MRNLATFEVEIK 597
           D +RH QR +H P +L+ + +   F +E+K
Sbjct: 78  DLQRHVQRVTHVPKLLQHLLDAPDFYIEMK 107


>AY051804-1|AAK93228.1|  637|Drosophila melanogaster LD31969p
           protein.
          Length = 637

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 508 DARRHTQRASHSPPILR*MRNLATFEVEIK 597
           D +RH QR +H P +L+ + +   F +E+K
Sbjct: 97  DLQRHVQRVTHVPKLLQHLLDAPDFYIEMK 126


>AE013599-2822|AAM68436.1|  592|Drosophila melanogaster CG15118-PD,
           isoform D protein.
          Length = 592

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 508 DARRHTQRASHSPPILR*MRNLATFEVEIK 597
           D +RH QR +H P +L+ + +   F +E+K
Sbjct: 52  DLQRHVQRVTHVPKLLQHLLDAPDFYIEMK 81


>AE013599-2821|AAM68435.1|  637|Drosophila melanogaster CG15118-PC,
           isoform C protein.
          Length = 637

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 508 DARRHTQRASHSPPILR*MRNLATFEVEIK 597
           D +RH QR +H P +L+ + +   F +E+K
Sbjct: 97  DLQRHVQRVTHVPKLLQHLLDAPDFYIEMK 126


>AE013599-2820|AAF57600.2|  637|Drosophila melanogaster CG15118-PB,
           isoform B protein.
          Length = 637

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 508 DARRHTQRASHSPPILR*MRNLATFEVEIK 597
           D +RH QR +H P +L+ + +   F +E+K
Sbjct: 97  DLQRHVQRVTHVPKLLQHLLDAPDFYIEMK 126


>AE013599-2819|AAG22258.2|  637|Drosophila melanogaster CG15118-PA,
           isoform A protein.
          Length = 637

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 508 DARRHTQRASHSPPILR*MRNLATFEVEIK 597
           D +RH QR +H P +L+ + +   F +E+K
Sbjct: 97  DLQRHVQRVTHVPKLLQHLLDAPDFYIEMK 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,876,714
Number of Sequences: 53049
Number of extensions: 529629
Number of successful extensions: 1450
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)