Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0543
         (628 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.60 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.2  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          22   5.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   5.6  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.4  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   9.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 375 KTSTSQRYHHIQTNLHCTYST 437
           K  T QR+HH+Q + H   ST
Sbjct: 134 KQETLQRHHHLQNHHHHLQST 154


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 245 LKSNTSYNVLDGIRIKIYTIDTYHY 319
           L SN  YNV++ +R K      Y Y
Sbjct: 99  LASNAGYNVIEQVRTKEEPHAPYRY 123


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 245 LKSNTSYNVLDGIRIKIYTIDTYHY 319
           L SN  YNV++ +R K      Y Y
Sbjct: 99  LASNAGYNVIEQVRTKEEPHAPYRY 123


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 245 LKSNTSYNVLDGIRIKIYTIDTYHY 319
           L SN  YNV++ +R K      Y Y
Sbjct: 99  LASNAGYNVIEQVRTKEEPHAPYRY 123


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +1

Query: 400 TIFRLIYIAHTPLAANATD*NHISSTLTHTTGTQSNDARRHT 525
           TI  ++YI H     NA +      T         +DAR HT
Sbjct: 89  TINSVVYIEHLTKLNNAIEEKRFELTNRKGVVFHHDDARPHT 130


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 458 KITFRVHSHTQLVHNRTTRGDTHSAHHTRPQSYVKC 565
           ++T R+H     VHN +  G   S     P+S  +C
Sbjct: 302 RLTLRIHRGRGSVHNGSNNGSPRS-----PESNSRC 332


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 417 N*SEYGDIVEMWMFYVP 367
           N S++  +V+ WM Y+P
Sbjct: 319 NSSDFKKLVDNWMTYMP 335


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 79  DFFVLCILCMVISW 38
           D+++  IL +VISW
Sbjct: 237 DYYIPSILIVVISW 250


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -2

Query: 417 N*SEYGDIVEMWMFYVP 367
           N S++  +++ WM Y+P
Sbjct: 319 NSSDFKKLIDNWMTYMP 335


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,643
Number of Sequences: 438
Number of extensions: 3544
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)