Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0541
(665 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 199 1e-51
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 199 1e-51
SB_56| Best HMM Match : Actin (HMM E-Value=0) 199 1e-51
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 199 1e-51
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 1e-29
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 2e-23
SB_54| Best HMM Match : Actin (HMM E-Value=0) 103 2e-22
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 76 2e-14
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 73 3e-13
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 67 1e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 52 4e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 43 2e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.64
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.84
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 31 0.84
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 31 1.1
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 31 1.1
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 1.1
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.1
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 1.1
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 1.1
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 30 1.5
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.9
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 29 2.6
SB_18355| Best HMM Match : Extensin_2 (HMM E-Value=0.55) 29 3.4
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 3.4
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 29 3.4
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 29 4.5
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 29 4.5
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 28 5.9
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 28 5.9
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 28 5.9
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 28 5.9
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 5.9
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 28 5.9
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 28 5.9
SB_11456| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40) 28 5.9
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 28 5.9
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 5.9
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 28 7.9
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 199 bits (486), Expect = 1e-51
Identities = 101/137 (73%), Positives = 104/137 (75%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 432
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 433 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT* 612
QIMFETFN+PAMYVAIQAVLSLYAS P + P
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDL 181
Query: 613 PGRDLTDYLMKILTERG 663
GRDLTDYLMKILTERG
Sbjct: 182 AGRDLTDYLMKILTERG 198
Score = 128 bits (309), Expect = 4e-30
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2
Query: 71 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 250
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 251 SK 256
SK
Sbjct: 61 SK 62
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/35 (91%), Positives = 35/35 (100%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLA
Sbjct: 148 RTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLA 182
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 199 bits (486), Expect = 1e-51
Identities = 101/137 (73%), Positives = 104/137 (75%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 432
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 433 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT* 612
QIMFETFN+PAMYVAIQAVLSLYAS P + P
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Query: 613 PGRDLTDYLMKILTERG 663
GRDLTDYLMKILTERG
Sbjct: 181 AGRDLTDYLMKILTERG 197
Score = 125 bits (302), Expect = 3e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +2
Query: 77 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 74.5 bits (175), Expect = 7e-14
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 147 RTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 199 bits (486), Expect = 1e-51
Identities = 101/137 (73%), Positives = 104/137 (75%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 432
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 433 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT* 612
QIMFETFN+PAMYVAIQAVLSLYAS P + P
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Query: 613 PGRDLTDYLMKILTERG 663
GRDLTDYLMKILTERG
Sbjct: 181 AGRDLTDYLMKILTERG 197
Score = 126 bits (305), Expect = 1e-29
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +2
Query: 77 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 74.5 bits (175), Expect = 7e-14
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 147 RTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 199 bits (486), Expect = 1e-51
Identities = 101/137 (73%), Positives = 104/137 (75%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 432
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 433 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT* 612
QIMFETFN+PAMYVAIQAVLSLYAS P + P
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 181
Query: 613 PGRDLTDYLMKILTERG 663
GRDLTDYLMKILTERG
Sbjct: 182 AGRDLTDYLMKILTERG 198
Score = 132 bits (320), Expect = 2e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +2
Query: 71 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 250
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 251 SK 256
SK
Sbjct: 61 SK 62
Score = 74.5 bits (175), Expect = 7e-14
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 148 RTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 182
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 183 bits (445), Expect = 1e-46
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 432
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 433 QIMFETFNTPAMYVAIQAVLSLYAS 507
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146
Score = 128 bits (309), Expect = 4e-30
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +2
Query: 71 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 250
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 251 SK 256
SK
Sbjct: 61 SK 62
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/26 (84%), Positives = 24/26 (92%), Gaps = 2/26 (7%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYE--GYA 581
RTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 148 RTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 126 bits (305), Expect = 1e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +2
Query: 77 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/35 (91%), Positives = 35/35 (100%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLA
Sbjct: 110 RTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLA 144
Score = 69.7 bits (163), Expect = 2e-12
Identities = 43/83 (51%), Positives = 47/83 (56%)
Frame = +1
Query: 415 NREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTP 594
N + M +IMFETFN+PAMYVAIQAVLSLYAS P + P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 595 SCVWT*PGRDLTDYLMKILTERG 663
GRDLTDYLMKILTERG
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERG 160
Score = 60.9 bits (141), Expect = 9e-10
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTF 342
+RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 105 bits (253), Expect = 2e-23
Identities = 55/140 (39%), Positives = 82/140 (58%), Gaps = 1/140 (0%)
Frame = +1
Query: 247 TEQRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 423
++ R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NRE
Sbjct: 62 SQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNRE 121
Query: 424 KMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 603
KM ++MFE + +Y+AIQAVL+LYA + CP + P +
Sbjct: 122 KMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRR 181
Query: 604 WT*PGRDLTDYLMKILTERG 663
GRD+T YL+K++ RG
Sbjct: 182 LDIAGRDITKYLIKLMLLRG 201
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 89 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 247
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 103 bits (246), Expect = 2e-22
Identities = 55/114 (48%), Positives = 71/114 (62%)
Frame = +1
Query: 322 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 501
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 502 ASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PGRDLTDYLMKILTERG 663
AS + + P P + GRDLT YL +++TERG
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERG 2242
Score = 61.7 bits (143), Expect = 5e-10
Identities = 29/43 (67%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA-RSRPHRL 635
RTTG V D GDGVSHTVP+Y+GY LPHA R+DLA R H L
Sbjct: 2192 RTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYL 2234
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 95 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 196
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 76.2 bits (179), Expect = 2e-14
Identities = 31/46 (67%), Positives = 41/46 (89%)
Frame = +1
Query: 370 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 507
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYAT 171
Score = 66.1 bits (154), Expect = 2e-11
Identities = 26/35 (74%), Positives = 34/35 (97%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+A
Sbjct: 173 RTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIA 207
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 72.5 bits (170), Expect = 3e-13
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 26 RTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Score = 61.3 bits (142), Expect = 7e-10
Identities = 37/76 (48%), Positives = 43/76 (56%)
Frame = +1
Query: 436 IMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 615
IMFE FN+PA+YVAIQAVLSLYAS + P + P
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 616 GRDLTDYLMKILTERG 663
GRDLTDYLMK++TERG
Sbjct: 61 GRDLTDYLMKLMTERG 76
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/76 (35%), Positives = 49/76 (64%)
Frame = +1
Query: 280 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 459
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 460 PAMYVAIQAVLSLYAS 507
PA ++ +VL+ +A+
Sbjct: 63 PAFFLCKNSVLTAFAN 78
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
R+ G+V+DSG + VP+++GY L AI+R LA
Sbjct: 80 RSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLA 114
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 80 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 196
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +2
Query: 65 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 235
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 236 GDEAQSK 256
GD A +K
Sbjct: 753 GDAAVAK 759
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +1
Query: 274 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 387
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 507 RRTTGIVLDSGDGVSHTVPI 566
R TG V+DSGDGV+H +P+
Sbjct: 353 RTLTGCVIDSGDGVTHVIPV 372
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 507 RRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
R TG V+DSGDGV+H +P+ EGY + I + +A
Sbjct: 59 RTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIA 94
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 193 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 77
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 32.3 bits (70), Expect = 0.37
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 355 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWT 534
++A + +P + E N K + +K+ Q M +T + + ++ +A +P W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMT---LLYNMPKIMRKFAFELPN---WA 919
Query: 535 PATVSPTPCPSTKDTHSP-TPSCV 603
P PT P+ K T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 271 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 423
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 168 GNTARGASSPAKPALHIPEPLSTT 97
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 168 GNTARGASSPAKPALHIPEPLSTT 97
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 31.1 bits (67), Expect = 0.84
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = +1
Query: 337 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 516
T E VAPE + E ++P+ T + ET TP VA + ++ +V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 517 PVSCWTPATVSPTPCPSTKDTHSP 588
+ TV+P + + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +1
Query: 349 ELRVAPE--EHP--VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 516
E +APE E P + E+ P+ MT + ET TP VA + + +++ P
Sbjct: 4372 ETTMAPESTEAPETTMAPESTEAPETTMAPMTTVASETTKTPDTPVAPETNMVAESTLAP 4431
Query: 517 PVSCWTPATVSPTPCPSTKDTHSP 588
+ TV+P + + T SP
Sbjct: 4432 ETTMTPEITVAPKTTMAPETTVSP 4455
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = +1
Query: 337 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 516
T E VAPE + E+ L + +T + ET TP VA + + ++ P
Sbjct: 4915 TMVPETTVAPET--TMAPESTLAAETTMAPVTTVASETTKTPDTTVAPETTMVPEGTLAP 4972
Query: 517 PVSCWTPATVSPTPCPSTKDTHSP 588
+ TV+P + + T +P
Sbjct: 4973 ETTMAPETTVAPETTMAPETTVAP 4996
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = +1
Query: 349 ELRVAPE--EHP--VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 516
E +APE E P ++ E + P+ + T + +T TP A + ++ A+V
Sbjct: 4264 ETTMAPESTEAPETTIVPETTVAPETTKAPETTVASKTTKTPETTFAPETTMAPEATVAE 4323
Query: 517 PVSCWTPATVSPTPCPSTKDTHSPTPSCV 603
+ TV+P + + T +P + V
Sbjct: 4324 ETTMAPVTTVAPETTKAPESTEAPETTMV 4352
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.1 bits (67), Expect = 0.84
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 31.1 bits (67), Expect = 0.84
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Frame = +1
Query: 349 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 516
E APE V T AP + P+ +T + ET PA A++ +L ++VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 517 PVSCWTPATVSP--TPCPSTKDTHSPT--PSCVW 606
+ + TV+P T P+T T P W
Sbjct: 1383 ETTASSETTVAPETTDAPATTLAPETTAAPETTW 1416
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +1
Query: 349 ELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 516
E VAPE L E P+ + +T P VAI++ L+L ++V P
Sbjct: 19 ETTVAPETTSAADTTLAPETTFAPETTVPPESTAAPDTTVAPETTVAIESTLALESTVAP 78
Query: 517 PVSCWTPATVSPTPCPSTKDTHSP 588
+ T TV+P + + T +P
Sbjct: 79 ETTVATETTVAPETTAAPESTLAP 102
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = -2
Query: 259 LFALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQ 95
+FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 461 IFATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNK 519
Query: 94 RGNFFVAHLELVK 56
G V L+ K
Sbjct: 520 HGQVDVLLLDFQK 532
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 440 CSKHSTRPPCTSPSKPCSRCTRPSYHRYRAG 532
C H+ R P T+PS PC S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 168 GNTARGASSPAKPALHIPEPLSTT 97
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 396 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 488
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 280 PIEHGIVTNWDDMEKIWHHTFYNE 351
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 83 EVAALVVDNGSGMCKAGFAGDDAPRAV 163
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -1
Query: 374 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMG--YLRVRIPLCSVPHLLHKSPSVPYRPS 201
CS + + C + ++V CS Y+ V +CS + H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 200 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 108
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_18355| Best HMM Match : Extensin_2 (HMM E-Value=0.55)
Length = 247
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 470 TSPSKPCSRCTRPSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPA 601
+SPS P ++ +PS H+Y + CLP + L PP +PA
Sbjct: 153 SSPSPP-TKPPKPSVHKYASDPELACLPQQTSL-----PPANPA 190
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 388 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTP 558
T+AP L PK T + ET + PA+ +A + + +V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 559 CPSTKDTHSP 588
+T+ T +P
Sbjct: 575 TAATEITAAP 584
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 470 TSPSKPCSRCTRPSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPA 601
+SPS P ++ +PS H+Y + CLP + L PP +PA
Sbjct: 258 SSPSPP-TKPPKPSVHKYASDPELACLPQQTSL-----PPANPA 295
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = +1
Query: 376 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPT 555
PVL A P A + TQ + P ++ V + A PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 556 PCPSTKDTHSPTP 594
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +3
Query: 354 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRRTTGIVLD 533
ACR R P P P+ + ++D D +I R P R + V +T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 534 SGDGVSHTVPI 566
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/92 (28%), Positives = 30/92 (32%), Gaps = 4/92 (4%)
Frame = +1
Query: 334 HTFYNELRVAP--EEHPVLLTEAPLNPKAN--REKMTQIMFETFNTPAMYVAIQAVLSLY 501
HT N AP HP L P+A M + ET P M V
Sbjct: 276 HTISNPAMAAPWVTPHPATLPVTLFTPQAAPVTPPMGAQLPET-EQPQMVAPSSTVTPPV 334
Query: 502 ASVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 597
PP S P PTP + +P PS
Sbjct: 335 TEPAPPSSVVAPPPAVPTPATAPPPVVAPPPS 366
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 168 GNTARGASSPAKPALHIPEPLSTT 97
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = -1
Query: 320 SMSSQLVTIPCSMGYLRVRIPLCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHL 141
+++SQ VT M R +PL S P + KSP V + P PD + R E HH
Sbjct: 792 ALTSQQVTSSHDMP--RTSMPLVSYPPHMKKSPFVVHHP--PDSAS--RHGNQAPEAHH- 844
Query: 140 LRNRPCTYRS 111
+ P +Y+S
Sbjct: 845 --HEPGSYKS 852
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 168 GNTARGASSPAKPALHIPEPLSTT 97
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 163 VPLDRGKAPPSGRDGRYGTEGLLCRR*GTEQRGILTLKYPIEHGIVTNW--DDMEKIWHH 336
V L + +GR+ G+ +CR+ + ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 337 TFYN 348
T N
Sbjct: 497 TCPN 500
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 505 SVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 603
+VVPP+ P V P+P + + SPTPSC+
Sbjct: 209 AVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L LC + ++LSH + H L +HG R +SCET L T
Sbjct: 854 LTCLCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_11456| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40)
Length = 391
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 478 IQAVLSLYASVVPPVSCWTP-ATVSPTPCPSTKDTHSP 588
++ +L+A+VV V+CWTP A + S+ H P
Sbjct: 250 VKVTKTLFATVVGFVTCWTPIAVIDMLDAYSSHQVHVP 287
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 259 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 116
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Frame = -1
Query: 311 SQLVTIPCSMGYLRVRIPLCSVPHLLHKS---------PSVPYRPSRPDGGAFP 177
S+ ++IP G+ R L P L H S P+ PY PS+ G +FP
Sbjct: 3759 SKPISIPSRDGHARAATSLPGSPQLSHLSGRFSSDDVSPTPPYSPSQKQGFSFP 3812
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 11/100 (11%)
Frame = +1
Query: 328 WHHTFYNELRVAPEEH----PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 495
+ H Y + P H P T P P+ + + ++ + P+ ++ +
Sbjct: 170 YKHPSYPTYNIPPTPHTSIPPTPHTSIPPTPRPTYKHPSYPSYKHPSYPSSHIQASLLPH 229
Query: 496 LYASVVPPVSCW------TPAT-VSPTPCPSTKDTHSPTP 594
+ AS++P + TP T + PTP P T +PTP
Sbjct: 230 IQASLLPLIPNTSIPPTPTPHTSIPPTPTPHTSIPPTPTP 269
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,317,369
Number of Sequences: 59808
Number of extensions: 619944
Number of successful extensions: 2524
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 2049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2496
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -