Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0541
(665 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 200 9e-52
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 198 4e-51
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 198 4e-51
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 198 4e-51
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 197 5e-51
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 197 5e-51
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 194 4e-50
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 193 8e-50
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 193 8e-50
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 173 9e-44
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 169 2e-42
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 166 1e-41
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 112 2e-25
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 98 4e-21
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 82 3e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 68 5e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 2e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 57 9e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 50 2e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.098
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 31 0.52
At3g28790.1 68416.m03593 expressed protein 30 1.2
At5g18270.2 68418.m02148 no apical meristem (NAM) family protein... 30 1.6
At5g18270.1 68418.m02147 no apical meristem (NAM) family protein... 30 1.6
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 30 1.6
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 29 2.1
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 29 2.1
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 29 2.1
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 2.8
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 2.8
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 29 2.8
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 29 3.7
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 29 3.7
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 29 3.7
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.7
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.7
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 4.9
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.5
At4g30070.1 68417.m04277 plant defensin-fusion protein, putative... 27 8.5
At1g11130.1 68414.m01274 leucine-rich repeat family protein / pr... 27 8.5
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 200 bits (487), Expect = 9e-52
Identities = 104/138 (75%), Positives = 109/138 (78%), Gaps = 1/138 (0%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 432
+RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 433 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 609
QIMFETFNTPAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 610 *PGRDLTDYLMKILTERG 663
GRDLTDYLMKILTERG
Sbjct: 182 LAGRDLTDYLMKILTERG 199
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +2
Query: 80 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 149 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 198 bits (482), Expect = 4e-51
Identities = 101/138 (73%), Positives = 109/138 (78%), Gaps = 1/138 (0%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 432
+RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 433 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 609
QIMFETFN+PAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAILRLD 181
Query: 610 *PGRDLTDYLMKILTERG 663
GRDLTDYLMKILTERG
Sbjct: 182 LAGRDLTDYLMKILTERG 199
Score = 106 bits (254), Expect = 2e-23
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +2
Query: 80 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLA
Sbjct: 149 RTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLA 183
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 198 bits (482), Expect = 4e-51
Identities = 101/138 (73%), Positives = 109/138 (78%), Gaps = 1/138 (0%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 432
+RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 433 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 609
QIMFETFN+PAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAILRLD 181
Query: 610 *PGRDLTDYLMKILTERG 663
GRDLTDYLMKILTERG
Sbjct: 182 LAGRDLTDYLMKILTERG 199
Score = 106 bits (254), Expect = 2e-23
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +2
Query: 80 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLA
Sbjct: 149 RTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLA 183
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 198 bits (482), Expect = 4e-51
Identities = 101/138 (73%), Positives = 109/138 (78%), Gaps = 1/138 (0%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 432
+RGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 433 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 609
QIMFETFN+PAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAILRLD 181
Query: 610 *PGRDLTDYLMKILTERG 663
GRDLTDYLMKILTERG
Sbjct: 182 LAGRDLTDYLMKILTERG 199
Score = 106 bits (254), Expect = 2e-23
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +2
Query: 80 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSK
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLA
Sbjct: 149 RTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLA 183
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 197 bits (481), Expect = 5e-51
Identities = 103/138 (74%), Positives = 108/138 (78%), Gaps = 1/138 (0%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 432
+RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 433 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 609
QIMFETFNTPAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 610 *PGRDLTDYLMKILTERG 663
GRDLTD+LMKILTERG
Sbjct: 182 LAGRDLTDHLMKILTERG 199
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +2
Query: 80 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 149 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 197 bits (481), Expect = 5e-51
Identities = 103/138 (74%), Positives = 108/138 (78%), Gaps = 1/138 (0%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 432
+RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 433 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 609
QIMFETFNTPAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 610 *PGRDLTDYLMKILTERG 663
GRDLTD+LMKILTERG
Sbjct: 182 LAGRDLTDHLMKILTERG 199
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +2
Query: 80 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 149 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 194 bits (473), Expect = 4e-50
Identities = 102/138 (73%), Positives = 107/138 (77%), Gaps = 1/138 (0%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 432
+RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 433 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 609
QIMFETFN PAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 610 *PGRDLTDYLMKILTERG 663
GRDLTD LMKILTERG
Sbjct: 182 LAGRDLTDSLMKILTERG 199
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +2
Query: 80 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 149 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 193 bits (471), Expect = 8e-50
Identities = 101/138 (73%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 432
+RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 433 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 609
QIMFETFN PAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 610 *PGRDLTDYLMKILTERG 663
GRDLTD LMKILTERG
Sbjct: 182 LAGRDLTDALMKILTERG 199
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +2
Query: 80 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 149 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 193 bits (471), Expect = 8e-50
Identities = 101/138 (73%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 432
+RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 433 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 609
QIMFETFN PAMYVAIQAVLSLYAS + + VS T P + P
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 610 *PGRDLTDYLMKILTERG 663
GRDLTD LMKILTERG
Sbjct: 182 LAGRDLTDALMKILTERG 199
Score = 110 bits (265), Expect = 7e-25
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +2
Query: 80 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSK
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 149 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 173 bits (421), Expect = 9e-44
Identities = 87/138 (63%), Positives = 102/138 (73%), Gaps = 1/138 (0%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 432
+RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMT
Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMT 123
Query: 433 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 609
QIMFE+F P+MY+ IQAVLSLY+S + + VS T P + P
Sbjct: 124 QIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 182
Query: 610 *PGRDLTDYLMKILTERG 663
GRDLT+YL KI+ ERG
Sbjct: 183 LAGRDLTEYLTKIMMERG 200
Score = 102 bits (245), Expect = 2e-22
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = +2
Query: 80 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 256
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 150 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 184
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 169 bits (410), Expect = 2e-42
Identities = 93/156 (59%), Positives = 106/156 (67%), Gaps = 1/156 (0%)
Frame = +1
Query: 199 RDGRYGTEGLLCRR*GTEQRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 378
RDG E + G R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 379 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPT 555
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+S V VS T
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 556 PCPSTKDTHSPTPSCVWT*PGRDLTDYLMKILTERG 663
P + P GRDLTDYL++I+TERG
Sbjct: 154 -VPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERG 188
Score = 65.3 bits (152), Expect = 3e-11
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 611
RTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL
Sbjct: 138 RTTGVVLDLGERVSHTVPVYEGYALPHGILRLDL 171
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +2
Query: 95 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 253
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E +
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 166 bits (404), Expect = 1e-41
Identities = 82/135 (60%), Positives = 97/135 (71%)
Frame = +1
Query: 259 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 438
GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQI
Sbjct: 20 GILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQI 79
Query: 439 MFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PG 618
MFETF P+MY+ +QA LSL+AS + P + + P G
Sbjct: 80 MFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAG 139
Query: 619 RDLTDYLMKILTERG 663
R LT+YLMKI+ ERG
Sbjct: 140 RHLTNYLMKIMMERG 154
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
RTTG VLDSGDGVS+ VPIYEG ALPHAILRLDLA
Sbjct: 104 RTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLA 138
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 112 bits (269), Expect = 2e-25
Identities = 56/139 (40%), Positives = 78/139 (56%)
Frame = +1
Query: 247 TEQRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 426
+E R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 427 MTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 606
M + MFE +N +++ IQAVL+LYA + P P +
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRM 179
Query: 607 T*PGRDLTDYLMKILTERG 663
GR +T YL+ +L+ RG
Sbjct: 180 NVAGRHITAYLVDLLSRRG 198
Score = 49.6 bits (113), Expect = 2e-06
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +3
Query: 516 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
TG+V+DSGDGV+H VP+ +GY+ PH R+++A
Sbjct: 150 TGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVA 182
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +2
Query: 95 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 241
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 98.3 bits (234), Expect = 4e-21
Identities = 53/137 (38%), Positives = 77/137 (56%), Gaps = 6/137 (4%)
Frame = +1
Query: 271 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 450
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 451 FNTPAMYVAIQAVLSLYASVVPPVSCWTPATV----SPTPCPSTKDTHSPTPSCVWT*P- 615
FN P +Y+A+ +VL+L A T V T + + SC+ + P
Sbjct: 146 FNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPVAEGY-VIGSCIKSIPI 204
Query: 616 -GRDLTDYLMKILTERG 663
G+D+T ++ +++ ERG
Sbjct: 205 AGKDVTLFIQQLMRERG 221
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 516 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 614
TG+V+D GDG +H VP+ EGY + I + +A
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIA 205
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 92 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 178
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 82.2 bits (194), Expect = 3e-16
Identities = 34/76 (44%), Positives = 52/76 (68%)
Frame = +1
Query: 280 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 459
PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE +
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153
Query: 460 PAMYVAIQAVLSLYAS 507
PA+++A VL+ +A+
Sbjct: 154 PALFMAKNPVLTSFAT 169
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 80 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 181
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 510 RTTGIVLDSGDGVSHTVPIYEGYALPHAIL 599
R T +V+D G G + P+++GY L A++
Sbjct: 171 RATSLVVDCGGGSTTISPVHDGYVLQKAVV 200
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 68.1 bits (159), Expect = 5e-12
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +1
Query: 280 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 456
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 457 TPAMYVAIQAVLSLYA 504
Y + QAVLSLYA
Sbjct: 117 VSGFYASEQAVLSLYA 132
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 92 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 184
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.5 bits (145), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 253 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 426
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 80 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 181
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 57.2 bits (132), Expect = 9e-09
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +1
Query: 271 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 450
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 451 FNTPAMYVA-IQAVLSLYASVVPPVS 525
F ++Y+A Q+++ LY + P S
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDS 146
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 438 HVRNIQHARHVRRHPSRALAVRVRRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 611
H +++ H R P L+ + +V+D G +H VP+ + L HAI R+DL
Sbjct: 130 HPQSLVHLYEASRQPDSILS---KTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDL 184
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 95 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 187
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +1
Query: 280 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 456
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 457 TPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHS 585
PA+ + A S + + + C V CP THS
Sbjct: 145 VPAVAFGVDAAFSYKYNQLHGI-CKKDGIVL---CPGFTTTHS 183
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2
Query: 95 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 241
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.098
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 216 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 79
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 31.5 bits (68), Expect = 0.52
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 505 SVVPPVSCWTPATVSPTPCPSTKDT-HSPTPSC 600
S+ PP+SC TP PCP + HS T C
Sbjct: 644 SIPPPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 505 SVVPPVSCWTPATVSP-TPCPSTKDTHSPTPS 597
S P S TP+T +P TP PST +PTPS
Sbjct: 278 SPTPTPSTPTPSTPTPSTPTPSTPTPSTPTPS 309
>At5g18270.2 68418.m02148 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +1
Query: 292 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 465
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 466 MYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPT 591
I +L S +PP+ P+ +S T P+ K + PT
Sbjct: 195 SLENIDHLLDF--SSLPPLI--DPSFMSQTEQPNFKPINPPT 232
>At5g18270.1 68418.m02147 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +1
Query: 292 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 465
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 466 MYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPT 591
I +L S +PP+ P+ +S T P+ K + PT
Sbjct: 195 SLENIDHLLDF--SSLPPLI--DPSFMSQTEQPNFKPINPPT 232
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1
Query: 463 AMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 597
+M AI++ S +A++ PV +P SP+P PS + SP+PS
Sbjct: 509 SMVGAIESRSSTHATIEDPVCEQSP---SPSPSPSPSPSPSPSPS 550
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 514 PPVSCWTPATVSPTPCPSTKDTHSPTP 594
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 514 PPVSCWTPATVSPTPCPSTKDTHSPTP 594
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 491 SRCTRPSYHRYRAGLRRRCL-PHRAHLRRIRTPPRHPASG 607
S T SY ++AG R R L P + L +R PPR PA+G
Sbjct: 594 STATSKSY-TFKAGDRVRFLGPSTSSLASLRAPPRGPATG 632
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +1
Query: 337 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 486
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 487 VLSLYAS 507
VL+LYA+
Sbjct: 241 VLALYAA 247
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +1
Query: 337 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 486
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 487 VLSLYAS 507
VL+LYA+
Sbjct: 241 VLALYAA 247
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 505 SVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 597
+ +PPV+ TP+ ++ P P + T +PT S
Sbjct: 36 TALPPVTAETPSPIASPPVPVNEPTPAPTTS 66
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 514 PPVSCWTPATVSPTPCPSTKDTHSPTP 594
PP S TP SP P P + SPTP
Sbjct: 233 PPSSSPTPGPDSPLPSPGPPPSPSPTP 259
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 514 PPVSCWTPATVSPTPCPSTK-DTHSPTPS 597
PP +P P P P+TK D+ SP+PS
Sbjct: 112 PPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 514 PPVSCWTPATVSPTPCPSTK-DTHSPTPS 597
PP +P P P P+TK D+ SP+PS
Sbjct: 112 PPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 265 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 426
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 265 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 426
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 393 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 494
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 192 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 70
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g30070.1 68417.m04277 plant defensin-fusion protein, putative
contains a C-terminal plant defensin domain, personal
communication, Bart Thomma
(Bart.Thomma@agr.kuleuven.ac.be)
Length = 129
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 269 VRIPLCSVPHLLHKSPSVPYRPSRPDGGA 183
V +PLC + PS P P + DGGA
Sbjct: 59 VGVPLCKCYYECESPPSPPAPPKKCDGGA 87
>At1g11130.1 68414.m01274 leucine-rich repeat family protein /
protein kinase family protein contains leucine
rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to leucine-rich
repeat transmembrane protein kinase 2 [Zea mays]
gi|3360291|gb|AAC27895
Length = 768
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 511 VPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PGRD 624
+PPVS PA +P + P+P VW+ P D
Sbjct: 270 IPPVSGVPPAPFAPFAPLQPQQHPPPSPPLVWSPPSSD 307
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,444,843
Number of Sequences: 28952
Number of extensions: 397955
Number of successful extensions: 1483
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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