Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0539
         (469 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   2.5  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   3.3  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   3.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   3.3  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.5  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    20   9.9  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 77  VGQAGVQIGNACWELYCLEHGIQPDGQMPTD 169
           +G+  V +    W LYC   G  P GQ+  D
Sbjct: 345 LGELAVCVNERPWSLYC---GEPPCGQLNPD 372


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 355 NYARGHYTIGKEIVDLVLDIIRKLADQCTG 444
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 73  TRWPSRSPDR*CLLGALLSGARHPA*WPD 159
           T W   + ++ C+ G L +   H   WP+
Sbjct: 117 TCWNGTATEQLCIGGLLYNERTHSCDWPE 145


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 243 RGTCLPAPVSLKKVLKES 190
           RGTC P    LKK L ++
Sbjct: 53  RGTCSPDGEELKKALPDA 70


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/27 (33%), Positives = 10/27 (37%)
 Frame = -1

Query: 430 QRACGLCPKPNRRFPFQWCSDHGHSCW 350
           Q  C     PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 110 CWELYCLEHGIQPDGQMPTDKT 175
           CW  Y +   +Q  GQ+P  +T
Sbjct: 263 CWSPYIIFDLLQVFGQIPGTQT 284


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 342 RCGQQLCPWSLH 377
           RCG  L P SLH
Sbjct: 701 RCGNHLPPISLH 712


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -2

Query: 111 QALPIWTPAWPTCTEMHSR 55
           ++ P+  PAW  CT    R
Sbjct: 184 ESQPMLWPAWVYCTRYSDR 202


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,643
Number of Sequences: 336
Number of extensions: 2743
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)