Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0539
(469 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 147 3e-36
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 144 3e-35
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 137 4e-33
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 130 7e-31
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 91 5e-19
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 91 5e-19
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 89 2e-18
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 87 5e-18
03_01_0034 + 318432-318825,318902-319851 87 5e-18
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 87 5e-18
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 85 2e-17
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 74 5e-14
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 55 3e-08
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.61
06_03_0019 + 15506702-15506896,15507741-15507875,15508264-155085... 30 0.81
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 0.81
04_04_1181 + 31526672-31527099,31527580-31527677,31527923-31528089 30 1.1
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 1.4
05_04_0062 + 17607290-17608852 29 1.4
10_03_0016 - 7099862-7099967,7100059-7100357,7101862-7102171,710... 29 1.9
08_01_0312 + 2764744-2767390,2767632-2767990 29 1.9
01_06_0637 + 30763657-30763858,30765600-30766261 29 1.9
12_02_0399 - 18600444-18600591,18600626-18601656 28 3.3
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 28 3.3
05_04_0068 + 17635693-17637204 28 3.3
01_06_1473 - 37619415-37619561,37619649-37619723,37619800-376199... 28 3.3
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 3.3
06_03_0530 + 21807464-21807685,21807809-21808207,21808312-21808818 28 4.3
01_06_1357 + 36632992-36633621,36634003-36635136,36635525-366361... 28 4.3
10_02_0143 + 5795028-5795108,5795197-5795403,5795878-5795976,579... 27 5.7
08_01_0009 + 68825-68950,72571-72669,72841-72929,74971-75087,757... 27 5.7
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 5.7
09_01_0105 + 1668103-1668174,1668277-1668344,1668858-1669116 27 7.5
08_02_1034 + 23823194-23823307,23823399-23823620,23823984-238243... 27 7.5
07_01_0284 - 2082249-2082256,2082496-2083009 27 7.5
03_02_0220 - 6531255-6532667 27 7.5
02_05_1359 + 35915507-35915905,35915999-35916188,35916298-35917133 27 7.5
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 27 7.5
12_02_0346 - 17776871-17781445 27 10.0
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 27 10.0
08_02_0647 - 19687142-19687145,19687244-19689352,19689764-19690617 27 10.0
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 147 bits (357), Expect = 3e-36
Identities = 60/67 (89%), Positives = 66/67 (98%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 233 HVPRAVF 253
HVPRAVF
Sbjct: 61 HVPRAVF 67
Score = 137 bits (332), Expect = 4e-33
Identities = 62/71 (87%), Positives = 67/71 (94%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD IRKLAD
Sbjct: 69 DLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 436 CTGLQGFLIFH 468
CTGLQGFL+F+
Sbjct: 129 CTGLQGFLVFN 139
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 144 bits (349), Expect = 3e-35
Identities = 58/67 (86%), Positives = 66/67 (98%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 233 HVPRAVF 253
HVPRAVF
Sbjct: 61 HVPRAVF 67
Score = 137 bits (331), Expect = 5e-33
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHYTIGKEIVDL LD IRKLAD
Sbjct: 69 DLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 436 CTGLQGFLIFH 468
CTGLQGFL+F+
Sbjct: 129 CTGLQGFLVFN 139
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 137 bits (332), Expect = 4e-33
Identities = 60/71 (84%), Positives = 68/71 (95%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD +RKLAD
Sbjct: 69 DLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADN 128
Query: 436 CTGLQGFLIFH 468
CTGLQGFL+F+
Sbjct: 129 CTGLQGFLVFN 139
Score = 129 bits (312), Expect = 1e-30
Identities = 52/67 (77%), Positives = 61/67 (91%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 233 HVPRAVF 253
HVPRA+F
Sbjct: 61 HVPRAIF 67
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 130 bits (313), Expect = 7e-31
Identities = 56/71 (78%), Positives = 66/71 (92%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DEV+TG YRQLFHPEQLI+ KEDAANN+ARGHYT+G+E+VDL LD +RKLAD
Sbjct: 129 DLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLDRLRKLADN 188
Query: 436 CTGLQGFLIFH 468
CTGLQGFL+F+
Sbjct: 189 CTGLQGFLVFN 199
Score = 81.4 bits (192), Expect = 3e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 169
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 164 TDKTIGGGDDSFNTFFSETGAGKHVPRAVF 253
+D T G D+FNTFFSET +GKHVPRA+F
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALF 127
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 90.6 bits (215), Expect = 5e-19
Identities = 38/73 (52%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 245 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 304
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 305 ENCDCLQGFQVCH 317
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/72 (40%), Positives = 41/72 (56%)
Frame = +2
Query: 35 KKTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 214
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDL--QLERVNVYYN 232
Query: 215 ETGAGKHVPRAV 250
E G+ VPRAV
Sbjct: 233 EASCGRFVPRAV 244
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 90.6 bits (215), Expect = 5e-19
Identities = 38/73 (52%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 54.8 bits (126), Expect = 3e-08
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 223
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGTSDLQLERVNVYYNEAS 55
Query: 224 AGKHVPRAV 250
G+ VPRAV
Sbjct: 56 CGRFVPRAV 64
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 89.0 bits (211), Expect = 2e-18
Identities = 37/73 (50%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 54.0 bits (124), Expect = 6e-08
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 233 HVPRAV 250
+VPRAV
Sbjct: 59 YVPRAV 64
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 87.4 bits (207), Expect = 5e-18
Identities = 36/73 (49%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 65 LMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 54.0 bits (124), Expect = 6e-08
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDL--QLERINVYYNEASGGR 58
Query: 233 HVPRAV 250
+VPRAV
Sbjct: 59 YVPRAV 64
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 87.4 bits (207), Expect = 5e-18
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 65 LMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 54.0 bits (124), Expect = 6e-08
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDL--QLERVNVYYNEASCGR 58
Query: 233 HVPRAV 250
VPRAV
Sbjct: 59 FVPRAV 64
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 87.4 bits (207), Expect = 5e-18
Identities = 36/73 (49%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 65 LMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 52.8 bits (121), Expect = 1e-07
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 233 HVPRAV 250
VPRAV
Sbjct: 59 FVPRAV 64
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 85.4 bits (202), Expect = 2e-17
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 430 DQCTGLQG 453
+ C LQG
Sbjct: 125 ENCDCLQG 132
Score = 54.0 bits (124), Expect = 6e-08
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDL--QLERVNVYYNEASCGR 58
Query: 233 HVPRAV 250
VPRAV
Sbjct: 59 FVPRAV 64
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 74.1 bits (174), Expect = 5e-14
Identities = 31/67 (46%), Positives = 45/67 (67%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 65 LMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 430 DQCTGLQ 450
+ C LQ
Sbjct: 125 ENCDCLQ 131
Score = 56.8 bits (131), Expect = 8e-09
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTY--TGTSPQQLERINVYFNEASGGR 58
Query: 233 HVPRAV 250
HVPRAV
Sbjct: 59 HVPRAV 64
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 54.8 bits (126), Expect = 3e-08
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDIIRK 423
L DLEP V++ ++ YR L++ E + + A NN+A G++ G+++VD ++D+I +
Sbjct: 66 LVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIMDMIDR 124
Query: 424 LADQCTGLQGFLIFH 468
AD L+GF++ H
Sbjct: 125 EADGSDSLEGFVLCH 139
Score = 54.4 bits (125), Expect = 4e-08
Identities = 28/65 (43%), Positives = 37/65 (56%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 236 VPRAV 250
+PRA+
Sbjct: 61 IPRAL 65
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 30.7 bits (66), Expect = 0.61
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 192 SSPPPMVLSVGIWPSGWMPCSR 127
S P P+ LS I SGW+PCSR
Sbjct: 147 SMPYPITLSAVISLSGWLPCSR 168
>06_03_0019 +
15506702-15506896,15507741-15507875,15508264-15508501,
15508652-15508855,15508945-15509111
Length = 312
Score = 30.3 bits (65), Expect = 0.81
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = -2
Query: 336 TSNKLFWMKQLS-VCASADLINNSRFKIAKTARGTCLPAPVSLKKVLKESSPPPMVLSV- 163
T NK+ +++ S + + +L++ K+ KT +P LKK+ + +P +VLS+
Sbjct: 211 TLNKILYLRPSSNILSHNELVSLWEKKVGKTFDRVYIPEDEVLKKIQESPAPLNVVLSIN 270
Query: 162 -GIWPSG 145
+W G
Sbjct: 271 HSVWVKG 277
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 30.3 bits (65), Expect = 0.81
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 189 SPPPMVLSVGIWPSGWMPCSR 127
+P P+ LSV + SGW+PC+R
Sbjct: 149 NPYPVNLSVSVGLSGWLPCAR 169
>04_04_1181 + 31526672-31527099,31527580-31527677,31527923-31528089
Length = 230
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 81 AKPESRSVMPAGSFTVWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVLSSRS 260
AKPE+ S +P + T+ ++ASS R + +GV ++ ++ +A Y V + R+
Sbjct: 72 AKPEAASAIPRATATITASASSAPPRRSVSVAAGVACAVAAVAVVGVAVAVAYVVRARRA 131
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 186 PPPMVLSVGIWPSGWMPCSR 127
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>05_04_0062 + 17607290-17608852
Length = 520
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 151 WPDAHRQDHRGWRRFFQHFLQRDRSWQARTPCCLRDLEPTVVDEVRTGTYRQL-FHPE 321
W H ++ FQ + + W+ P + L ++D+V TG R L HPE
Sbjct: 442 WFPKHSSQLARFKSEFQKTFRHQKLWKVPNPRLRQKLREAIIDKVITGYKRYLEDHPE 499
>10_03_0016 -
7099862-7099967,7100059-7100357,7101862-7102171,
7104402-7105054,7105266-7105554,7106549-7106634
Length = 580
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 309 VSSRTTYYW*GRCGQQLCPWSLHHWK 386
VS+RTTY +C Q CPW +H +K
Sbjct: 239 VSNRTTYKV--KCTQAGCPWRVHGYK 262
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 153 ARCPQTRPSGVETILSTLSSARPE 224
+RCPQ RPS + +LS L ARP+
Sbjct: 969 SRCPQERPS-MREVLSMLQEARPK 991
>01_06_0637 + 30763657-30763858,30765600-30766261
Length = 287
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 214 RDRSWQARTPCCLRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDA 348
R+ +TP RDL ++V++ GTY F +++ T D+
Sbjct: 65 REEGLNLKTPKAERDLSTSIVNDFGDGTYTVAFDEDKIYTTVTDS 109
>12_02_0399 - 18600444-18600591,18600626-18601656
Length = 392
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 309 VSSRTTYYW*GRCGQQLCPWSLHHWK 386
+S+RTTY +C Q CPW +H +K
Sbjct: 240 ISNRTTYDV--KCTQAGCPWRVHGYK 263
>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
Length = 400
Score = 28.3 bits (60), Expect = 3.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 382 QWCSDHGHSCWPHLP 338
++ S+HGHSCW +P
Sbjct: 26 RYISEHGHSCWSSVP 40
>05_04_0068 + 17635693-17637204
Length = 503
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +1
Query: 196 FQHFLQRDRSWQARTPCCLRDLEPTVVDEVRTGT--YRQLF--HPEQ 324
FQ + + W+ P R L ++D+V TG YR HPEQ
Sbjct: 437 FQRTCRHQKLWKVPNPELRRSLRKAIIDKVITGPTGYRTYLEAHPEQ 483
>01_06_1473 -
37619415-37619561,37619649-37619723,37619800-37619919,
37620074-37620127,37620204-37620426,37620506-37620585,
37620675-37620764,37620847-37620960,37621192-37621272,
37621383-37621490,37621677-37621722,37621802-37621899,
37621975-37622148,37622456-37622548,37623229-37623285,
37623399-37623438,37623567-37623685,37624179-37624298,
37624723-37624815,37624940-37625251,37625325-37625444,
37625545-37625658,37625731-37625910,37625996-37626110,
37626195-37626358,37626584-37626769,37626888-37626978,
37627089-37627153,37627223-37627297,37627410-37627493,
37627575-37627742,37628160-37629293
Length = 1579
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 118 LPAGITDLDSGLANVYRDALTHFNLSFFLCLNVELNY 8
L A + +L SGL + D L+ FN+S F V+ NY
Sbjct: 429 LRASLHELASGLKSEIADKLSDFNVSNFAMTPVKRNY 465
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 180 PMVLSVGIWPSGWMPCSR 127
P+ LS I SGW+PCSR
Sbjct: 184 PVTLSAVIGLSGWLPCSR 201
>06_03_0530 + 21807464-21807685,21807809-21808207,21808312-21808818
Length = 375
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 436 TGQRACGLCPKPNRRFPFQWCSDHGH 359
TG A + PK RR P Q DHGH
Sbjct: 149 TGGAATTVAPKKPRRRPAQAYEDHGH 174
>01_06_1357 +
36632992-36633621,36634003-36635136,36635525-36636193,
36636250-36636343,36636378-36636490
Length = 879
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 114 GSFTVWSTASSLMARCPQTRPSGVETILSTLSSARPE-LASTYPVLSS 254
G FTV + T+P ++ ++S PE +A T PV++S
Sbjct: 50 GGFTVLGNYIGALGNPQNTKPEKIDMTAPVITSGEPESIAMTAPVITS 97
>10_02_0143 +
5795028-5795108,5795197-5795403,5795878-5795976,
5796136-5796224,5797876-5797992,5798262-5798367,
5798522-5798606,5798699-5798808,5799335-5799465,
5799686-5799782,5800310-5800603
Length = 471
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 72 YTLAKPESRSVMPAGSFTVWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVL 248
Y++ +PES S GSF W +++ P + P G++ + S + +R S++ +L
Sbjct: 393 YSIVEPESASAATLGSF--WDVVPGALSKAP-SEP-GLKEMNSGQNGSRKTHGSSFSIL 447
>08_01_0009 +
68825-68950,72571-72669,72841-72929,74971-75087,
75747-75906,76419-76549,76810-76906,77584-77877
Length = 370
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 72 YTLAKPESRSVMPAGSFTVWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVL 248
Y++ +PES S GSF W +++ P + P G++ + S + +R S++ +L
Sbjct: 292 YSIVEPESASAATLGSF--WDVVPGALSKAP-SEP-GLKEMNSGQNGSRKTHGSSFSIL 346
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 149 DGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 244
DG++PTD G D N S+ A + P+
Sbjct: 343 DGELPTDAAAQGADVDLNLRISQPAASQQSPK 374
>09_01_0105 + 1668103-1668174,1668277-1668344,1668858-1669116
Length = 132
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 265 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKL 426
P + + VR P +L +AA YA+ T+ KE+ V+DI K+
Sbjct: 38 PPIYEPVRIRDMYGEDDPSKLPERTNEAAGTYAQACLTVAKELNHPVIDIWTKM 91
>08_02_1034 +
23823194-23823307,23823399-23823620,23823984-23824309,
23824648-23824777,23825145-23825441,23825550-23825815,
23827835-23828333,23828902-23828993,23829571-23829735,
23829817-23830204,23830275-23830393,23830494-23830524,
23830675-23830880,23830970-23831014,23831120-23831201,
23832210-23832398,23834499-23834602,23834669-23834759,
23835097-23835225,23835425-23835556,23835779-23835949,
23836143-23836171,23836214-23836301,23836313-23836391,
23836666-23836844
Length = 1390
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = -1
Query: 262 QDREDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQTVKLPAGIT 101
+DRE+ ++A+S + E++ IV G+VC ++++ D L+ ++LP +T
Sbjct: 46 EDRENEGDLIMAASKVTPEAMAFIVRHGTGIVC--VSMKEDD-LERLELPLMVT 96
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 225 APVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 97
+P+ K E PPP + I W P + ++QQ +PI
Sbjct: 63 SPIFAKLAAAEPPPPPSTTAPIIAAPAWAPLLQFAATQQIIPI 105
>03_02_0220 - 6531255-6532667
Length = 470
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 147 LMARCPQTRPSGVETILSTLSSARPELASTYPVLSSRS 260
L+ R P + P LS+L+++ P+L S P+L S S
Sbjct: 77 LLWRLPPSSPLPSSYALSSLAASLPDLPSAVPLLLSSS 114
>02_05_1359 + 35915507-35915905,35915999-35916188,35916298-35917133
Length = 474
Score = 27.1 bits (57), Expect = 7.5
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 291 SADLINNSRFKIAKTARGTCLPAPVSLKKVLK-ESSPPP 178
S + + R K +TAR LP P S KK L+ E SP P
Sbjct: 31 SIKFLRDWRHKKERTARPDRLPLPKSSKKGLRIEDSPHP 69
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 96 RSVMPAGSFTVWSTASSLMARCPQTRPSGVETILSTLSSARPE 224
++ M A T S +S P + PSGV L + SSA PE
Sbjct: 690 QTAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPE 732
>12_02_0346 - 17776871-17781445
Length = 1524
Score = 26.6 bits (56), Expect = 10.0
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = -1
Query: 265 VQDREDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQTVKLPAGITDLDSG 86
++ R +T ++ + ++RIV+ D ++ G VL V P GI +
Sbjct: 234 LEKRPKTTPTIIEHELFGRKDLKRIVA--DEIMIGKYRDNDITVLPIVG-PGGIGKT-TF 289
Query: 85 LANVYRDALTHFNLSFFLCLNVELNYN 5
++Y + HF +S ++C++ N N
Sbjct: 290 TQHIYEEVKNHFQISVWICVSQNFNAN 316
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 26.6 bits (56), Expect = 10.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 104 NACWELYCLEHGI 142
N CW+L C+EH +
Sbjct: 467 NLCWKLICMEHAV 479
>08_02_0647 - 19687142-19687145,19687244-19689352,19689764-19690617
Length = 988
Score = 26.6 bits (56), Expect = 10.0
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -2
Query: 318 WMKQLSVCASADLINNSRFKIAKTARGTCLPAPVSLKKVLKESSPPPMVLS 166
WM LS D IN +F + +PA +SLK L+ES +V+S
Sbjct: 783 WMSSLSELTFLD-INVKQFGVEDMKILQNMPALLSLKLYLEESPQETLVIS 832
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,446,399
Number of Sequences: 37544
Number of extensions: 333697
Number of successful extensions: 1182
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -