Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0539
(469 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 151 2e-37
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 151 4e-37
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 5e-37
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 150 5e-37
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 150 6e-37
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 9e-37
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 149 1e-36
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 148 3e-36
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 3e-36
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 1e-34
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 1e-32
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 6e-32
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 132 1e-31
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 126 9e-30
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-26
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 3e-22
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 91 6e-19
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 87 9e-18
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 87 9e-18
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 86 2e-17
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 85 4e-17
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 71 5e-13
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 52 2e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 42 3e-04
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 36 0.022
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 30 1.1
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028) 28 3.4
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 27 7.7
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 27 7.7
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 151 bits (367), Expect = 2e-37
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 233 HVPRAVF 253
HVPRAVF
Sbjct: 61 HVPRAVF 67
Score = 150 bits (364), Expect = 5e-37
Identities = 69/71 (97%), Positives = 70/71 (98%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEIVDLVLD IRKLADQ
Sbjct: 502 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADQ 561
Query: 436 CTGLQGFLIFH 468
CTGLQGFLIFH
Sbjct: 562 CTGLQGFLIFH 572
Score = 150 bits (363), Expect = 6e-37
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHYT+GKEIVDLVLD IRKLADQ
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADQ 128
Query: 436 CTGLQGFLIFH 468
CTGLQGFLIFH
Sbjct: 129 CTGLQGFLIFH 139
Score = 149 bits (362), Expect = 9e-37
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 236 VPRAVF 253
VPRAVF
Sbjct: 495 VPRAVF 500
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 151 bits (365), Expect = 4e-37
Identities = 66/69 (95%), Positives = 67/69 (97%)
Frame = +2
Query: 47 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 226
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 227 GKHVPRAVF 253
GKHVPRAVF
Sbjct: 123 GKHVPRAVF 131
Score = 151 bits (365), Expect = 4e-37
Identities = 70/71 (98%), Positives = 70/71 (98%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD IRKLADQ
Sbjct: 133 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQ 192
Query: 436 CTGLQGFLIFH 468
CTGLQGFLIFH
Sbjct: 193 CTGLQGFLIFH 203
Score = 150 bits (363), Expect = 6e-37
Identities = 64/67 (95%), Positives = 67/67 (100%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 233 HVPRAVF 253
HVPRAVF
Sbjct: 646 HVPRAVF 652
Score = 149 bits (362), Expect = 9e-37
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 236 VPRAVF 253
VPRAVF
Sbjct: 574 VPRAVF 579
Score = 149 bits (361), Expect = 1e-36
Identities = 67/71 (94%), Positives = 70/71 (98%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLD IRKLADQ
Sbjct: 654 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQ 713
Query: 436 CTGLQGFLIFH 468
CTGLQGFLIFH
Sbjct: 714 CTGLQGFLIFH 724
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 150 bits (364), Expect = 5e-37
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 236 VPRAVFA 256
VPRAVFA
Sbjct: 866 VPRAVFA 872
Score = 149 bits (360), Expect = 1e-36
Identities = 67/71 (94%), Positives = 70/71 (98%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLD IRKLADQ
Sbjct: 873 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRKLADQ 932
Query: 436 CTGLQGFLIFH 468
CTGLQGFLIFH
Sbjct: 933 CTGLQGFLIFH 943
Score = 147 bits (356), Expect = 5e-36
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAGKH
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 236 VPRAVF 253
VPRAVF
Sbjct: 433 VPRAVF 438
Score = 142 bits (344), Expect = 1e-34
Identities = 63/71 (88%), Positives = 68/71 (95%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE +D+VLD +RKLAD
Sbjct: 440 DLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRKLADG 499
Query: 436 CTGLQGFLIFH 468
CTGLQGFLIFH
Sbjct: 500 CTGLQGFLIFH 510
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 150 bits (364), Expect = 5e-37
Identities = 64/67 (95%), Positives = 67/67 (100%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 233 HVPRAVF 253
HVPRAVF
Sbjct: 61 HVPRAVF 67
Score = 148 bits (359), Expect = 2e-36
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD RKLADQ
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLADQ 128
Query: 436 CTGLQGFLIFH 468
CTGLQGFLIFH
Sbjct: 129 CTGLQGFLIFH 139
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 150 bits (363), Expect = 6e-37
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLD IRKLADQ
Sbjct: 68 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQ 127
Query: 436 CTGLQGFLIFH 468
CTGLQGFLIFH
Sbjct: 128 CTGLQGFLIFH 138
Score = 149 bits (362), Expect = 9e-37
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 236 VPRAVF 253
VPRAVF
Sbjct: 61 VPRAVF 66
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 149 bits (362), Expect = 9e-37
Identities = 64/67 (95%), Positives = 67/67 (100%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 233 HVPRAVF 253
HVPRAVF
Sbjct: 61 HVPRAVF 67
Score = 143 bits (346), Expect = 7e-35
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D VLD +RKLAD
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLADG 128
Query: 436 CTGLQGFLIFH 468
CTGLQGFLIFH
Sbjct: 129 CTGLQGFLIFH 139
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 149 bits (360), Expect = 1e-36
Identities = 64/67 (95%), Positives = 66/67 (98%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 233 HVPRAVF 253
HVPRAVF
Sbjct: 61 HVPRAVF 67
Score = 99.5 bits (237), Expect = 1e-21
Identities = 51/71 (71%), Positives = 54/71 (76%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVV PEQLITGKEDAANNYARGHYTIGK+ VD VLD +RKLADQ
Sbjct: 69 DLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQ 118
Query: 436 CTGLQGFLIFH 468
C+GLQGF IFH
Sbjct: 119 CSGLQGFFIFH 129
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 148 bits (358), Expect = 3e-36
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 236 VPRAVF 253
VPRAVF
Sbjct: 480 VPRAVF 485
Score = 144 bits (350), Expect = 2e-35
Identities = 63/71 (88%), Positives = 70/71 (98%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK+++++VLD +RKLADQ
Sbjct: 54 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQ 113
Query: 436 CTGLQGFLIFH 468
CTGLQGFLIFH
Sbjct: 114 CTGLQGFLIFH 124
Score = 138 bits (335), Expect = 2e-33
Identities = 60/71 (84%), Positives = 68/71 (95%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK+ +D VLD IRKLADQ
Sbjct: 487 DLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLADQ 546
Query: 436 CTGLQGFLIFH 468
C+GLQGFL+FH
Sbjct: 547 CSGLQGFLVFH 557
Score = 119 bits (287), Expect = 1e-27
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +2
Query: 98 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 253
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVF
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVF 52
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 147 bits (357), Expect = 3e-36
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 233 HVPRAVF 253
HVPRAVF
Sbjct: 61 HVPRAVF 67
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 142 bits (344), Expect = 1e-34
Identities = 62/71 (87%), Positives = 68/71 (95%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DE+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE +DL LD IRKLADQ
Sbjct: 34 DLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQ 93
Query: 436 CTGLQGFLIFH 468
CTGLQGFLIFH
Sbjct: 94 CTGLQGFLIFH 104
Score = 70.9 bits (166), Expect = 5e-13
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +2
Query: 158 MPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 253
MP+DKTIGGGDDSFNTFF+ETGAGKHVPRAVF
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVF 32
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 135 bits (327), Expect = 1e-32
Identities = 60/66 (90%), Positives = 64/66 (96%)
Frame = +1
Query: 271 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQCTGLQ 450
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLD IRKLADQCTGLQ
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQ 70
Query: 451 GFLIFH 468
GFLIFH
Sbjct: 71 GFLIFH 76
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 133 bits (322), Expect = 6e-32
Identities = 58/73 (79%), Positives = 68/73 (93%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHYTIGKE+V++V+D IRK+
Sbjct: 978 LVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMT 1037
Query: 430 DQCTGLQGFLIFH 468
DQC+GLQGFLIFH
Sbjct: 1038 DQCSGLQGFLIFH 1050
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 132 bits (320), Expect = 1e-31
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = +1
Query: 280 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQCTGLQGFL 459
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLD IRKLADQCTGLQGFL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFL 61
Query: 460 IFH 468
IFH
Sbjct: 62 IFH 64
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 126 bits (304), Expect = 9e-30
Identities = 55/63 (87%), Positives = 60/63 (95%)
Frame = +1
Query: 280 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQCTGLQGFL 459
E+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE +DL LD IRKLADQCTGLQGFL
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFL 61
Query: 460 IFH 468
IFH
Sbjct: 62 IFH 64
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 116 bits (279), Expect = 1e-26
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 233 H 235
H
Sbjct: 256 H 256
Score = 35.9 bits (79), Expect = 0.017
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 421 KLADQCTGLQGFLIFH 468
K ADQCTGLQGFL+FH
Sbjct: 255 KHADQCTGLQGFLVFH 270
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 101 bits (242), Expect = 3e-22
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = +1
Query: 280 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKL 426
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLD IRKL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 90.6 bits (215), Expect = 6e-19
Identities = 40/49 (81%), Positives = 44/49 (89%)
Frame = +1
Query: 280 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKL 426
EVR GTYR LFHP+QLITGKEDAANNYARGHYT+GKE +DL L+ IRKL
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 86.6 bits (205), Expect = 9e-18
Identities = 37/73 (50%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD++RK A
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 125 ESCDCLQGFQLTH 137
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/66 (39%), Positives = 35/66 (53%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 233 HVPRAV 250
+VPRA+
Sbjct: 59 YVPRAI 64
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 86.6 bits (205), Expect = 9e-18
Identities = 37/73 (50%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD++RK A
Sbjct: 278 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 337
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 338 ESCDCLQGFQLTH 350
Score = 55.6 bits (128), Expect = 2e-08
Identities = 29/71 (40%), Positives = 37/71 (52%)
Frame = +2
Query: 38 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 217
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNE 266
Query: 218 TGAGKHVPRAV 250
GK+VPRAV
Sbjct: 267 ATGGKYVPRAV 277
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 85.8 bits (203), Expect = 2e-17
Identities = 36/73 (49%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD++RK A
Sbjct: 10 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 69
Query: 430 DQCTGLQGFLIFH 468
+ C +QGF + H
Sbjct: 70 ESCDCIQGFQLTH 82
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 84.6 bits (200), Expect = 4e-17
Identities = 35/73 (47%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 65 LIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ C +QGF + H
Sbjct: 125 ESCDCIQGFQLTH 137
Score = 54.4 bits (125), Expect = 4e-08
Identities = 27/66 (40%), Positives = 37/66 (56%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 233 HVPRAV 250
+VPR+V
Sbjct: 59 YVPRSV 64
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 70.9 bits (166), Expect = 5e-13
Identities = 29/68 (42%), Positives = 44/68 (64%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VR G +F P+ + + AANN+A+GHY+ G E++D + D++RK A
Sbjct: 21 LVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEA 80
Query: 430 DQCTGLQG 453
+ C +QG
Sbjct: 81 ENCDCMQG 88
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/66 (39%), Positives = 35/66 (53%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 233 HVPRAV 250
+VPRA+
Sbjct: 59 YVPRAI 64
Score = 31.9 bits (69), Expect = 0.27
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLI 330
L DLEP +D VR+G + Q+F P+ +
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1
Query: 337 KEDAANNYARGHYTIGKEIVDLVLDIIRKLADQCTGLQGFLIFH 468
+ AANN+A+G YT G E++D +D IRKLA+ C +QGF I H
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAH 45
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/67 (29%), Positives = 38/67 (56%)
Frame = +1
Query: 259 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQC 438
+ T+ + ++GT+R + Q + K + NN+A G G + +D VLD++++ ++C
Sbjct: 78 ISQTLSEASKSGTWR--YPKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKC 135
Query: 439 TGLQGFL 459
L GFL
Sbjct: 136 DRLDGFL 142
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 35.5 bits (78), Expect = 0.022
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 427 ADQCTGLQGFLIFH 468
ADQCTGLQGFLIFH
Sbjct: 1 ADQCTGLQGFLIFH 14
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG-QMPTDKT-IGGGDDSFNTFFSETGAG 229
+ C S + +GV+ G W L + GIQP P+D + D +NT +
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSDDSDCNVLCDQYNTVLNHF-IE 295
Query: 230 KHVPRAVFAI 259
KH P F++
Sbjct: 296 KHAPVRTFSV 305
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 134 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFA 256
+GI+PDGQ D+ +NT F G P A+ A
Sbjct: 708 NGIRPDGQGLVDEGFKTASGIYNTCFERLGMNFQTPEAIVA 748
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 113 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 217
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028)
Length = 302
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 282 GPHWHIQTVVSSRTTYYW*GRCGQQLCPWSLHHWKGN 392
G HW+ T + +W G G + W HW GN
Sbjct: 48 GKHWYGNTGTKTLIWKHWYGNTGTKTLIWK--HWYGN 82
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 360
L D+E VV+ + G +F +QLIT NN+
Sbjct: 79 LIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -2
Query: 243 RGTCLPAPVSLKKV-LKESSPPPMVLSVGI 157
RGTCLP+ L++V LK+ + LSVG+
Sbjct: 759 RGTCLPSRDMLRRVLLKKGAREQGTLSVGV 788
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,313,876
Number of Sequences: 59808
Number of extensions: 360587
Number of successful extensions: 1025
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 969807871
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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