Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0539
(469 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 50 3e-08
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 44 3e-06
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 44 3e-06
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 44 3e-06
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 44 3e-06
AY146746-1|AAO12061.1| 333|Anopheles gambiae odorant-binding pr... 27 0.43
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 3.0
Z69977-1|CAA93817.1| 151|Anopheles gambiae ribosomal protein RS... 23 5.3
AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450 pr... 23 5.3
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 5.3
AY545988-1|AAS99341.1| 423|Anopheles gambiae carboxypeptidase B... 23 7.0
AJ627286-1|CAF28572.1| 423|Anopheles gambiae carboxypeptidase B... 23 7.0
AJ496389-1|CAD43035.1| 103|Anopheles gambiae mannosyl glycoprot... 23 7.0
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 23 7.0
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 50.4 bits (115), Expect = 3e-08
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWE 118
MRECISVHVGQAGVQIGN CW+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
Score = 41.1 bits (92), Expect = 2e-05
Identities = 23/46 (50%), Positives = 25/46 (54%)
Frame = +3
Query: 108 PAGSFTVWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPV 245
P TVWS AS+ RCP+TR S ST SS R AST PV
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPV 64
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 44.0 bits (99), Expect = 3e-06
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +1
Query: 370 HYTIGKEIVDLVLDIIRKLADQCTGLQGFLIFH 468
HYT G E+VD VLD++RK + C LQGF + H
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 33
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 44.0 bits (99), Expect = 3e-06
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +1
Query: 370 HYTIGKEIVDLVLDIIRKLADQCTGLQGFLIFH 468
HYT G E+VD VLD++RK + C LQGF + H
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 33
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 44.0 bits (99), Expect = 3e-06
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +1
Query: 370 HYTIGKEIVDLVLDIIRKLADQCTGLQGFLIFH 468
HYT G E+VD VLD++RK + C LQGF + H
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 33
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 44.0 bits (99), Expect = 3e-06
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +1
Query: 370 HYTIGKEIVDLVLDIIRKLADQCTGLQGFLIFH 468
HYT G E+VD VLD++RK + C LQGF + H
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTH 33
>AY146746-1|AAO12061.1| 333|Anopheles gambiae odorant-binding
protein AgamOBP43 protein.
Length = 333
Score = 26.6 bits (56), Expect = 0.43
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 217 DRSWQARTPCCLRDLEPTVVD 279
D+ +Q RT CL LEP+V D
Sbjct: 111 DQDYQNRTRSCLAALEPSVTD 131
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.8 bits (49), Expect = 3.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 159 CPQTRPSGVETILSTLSSARPELAS 233
C RPS ++ ++ S RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188
>Z69977-1|CAA93817.1| 151|Anopheles gambiae ribosomal protein RS11
protein.
Length = 151
Score = 23.0 bits (47), Expect = 5.3
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 166 RQDHRGWRRFFQHFLQRDRSWQARTPCCLRDLE 264
R+D+ + R + F +R+R+ + C RD+E
Sbjct: 82 RRDYLQFIRKYDTFEKRNRNMRLHLSPCFRDVE 114
>AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 23.0 bits (47), Expect = 5.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 181 GWRRFFQHFLQRDRSWQAR 237
GW + HF QR R W R
Sbjct: 12 GWLWIYLHFNQRYRFWVER 30
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.0 bits (47), Expect = 5.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 277 QQQ*VQDREDSTGYVLASSGLAEESVE 197
QQQ QD STG +S L++++++
Sbjct: 3016 QQQQQQDARSSTGICTSSDTLSQQTLQ 3042
>AY545988-1|AAS99341.1| 423|Anopheles gambiae carboxypeptidase B
precursor protein.
Length = 423
Score = 22.6 bits (46), Expect = 7.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 400 NRRFPFQW 377
NR FPFQW
Sbjct: 258 NRNFPFQW 265
>AJ627286-1|CAF28572.1| 423|Anopheles gambiae carboxypeptidase B
protein.
Length = 423
Score = 22.6 bits (46), Expect = 7.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 400 NRRFPFQW 377
NR FPFQW
Sbjct: 258 NRNFPFQW 265
>AJ496389-1|CAD43035.1| 103|Anopheles gambiae mannosyl glycoprotein
transferase protein.
Length = 103
Score = 22.6 bits (46), Expect = 7.0
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +3
Query: 294 HIQTVVSSRTTYYW*GRCGQQLCPWSLHHW 383
H + +RT +Y RC + C + ++W
Sbjct: 66 HNMGMAFNRTMWYEIVRCARHFCEYDDYNW 95
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 22.6 bits (46), Expect = 7.0
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 209 RKC*KNRLHPRWSCLWASGHQAGCRAPDSKAPSRHYR 99
RK +R +PR + G CR+P ++ SR R
Sbjct: 248 RKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTR 284
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,500
Number of Sequences: 2352
Number of extensions: 11372
Number of successful extensions: 24
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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