Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0539
(469 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 142 1e-34
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 142 1e-34
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 142 1e-34
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 142 1e-34
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 136 7e-33
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 136 7e-33
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 136 7e-33
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 136 7e-33
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 132 9e-32
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 132 9e-32
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 131 3e-31
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 130 5e-31
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 130 6e-31
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 127 5e-30
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 127 5e-30
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 123 6e-29
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 90 8e-19
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 87 8e-18
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 87 8e-18
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 86 1e-17
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 83 1e-16
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 83 1e-16
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 72 2e-13
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 72 2e-13
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 40 7e-04
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 40 7e-04
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 31 0.54
U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical p... 28 3.8
U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical p... 28 3.8
AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassi... 28 3.8
AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical ... 28 3.8
AF324489-1|AAK49910.1| 351|Caenorhabditis elegans F44C8.7-like ... 27 6.7
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 27 6.7
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 27 6.7
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 27 6.7
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 27 6.7
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 27 6.7
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 27 6.7
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 27 6.7
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 27 6.7
AF016438-4|AAB65894.2| 351|Caenorhabditis elegans Hypothetical ... 27 6.7
Z37983-10|CAA86060.4| 267|Caenorhabditis elegans Hypothetical p... 27 8.9
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 142 bits (344), Expect = 1e-34
Identities = 62/71 (87%), Positives = 67/71 (94%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD IR+LAD
Sbjct: 69 DLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADN 128
Query: 436 CTGLQGFLIFH 468
CTGLQGFL+FH
Sbjct: 129 CTGLQGFLVFH 139
Score = 135 bits (327), Expect = 1e-32
Identities = 56/66 (84%), Positives = 64/66 (96%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 233 HVPRAV 250
HVPRAV
Sbjct: 61 HVPRAV 66
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 142 bits (344), Expect = 1e-34
Identities = 62/71 (87%), Positives = 67/71 (94%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD IR+LAD
Sbjct: 68 DLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADN 127
Query: 436 CTGLQGFLIFH 468
CTGLQGFL+FH
Sbjct: 128 CTGLQGFLVFH 138
Score = 133 bits (322), Expect = 5e-32
Identities = 55/65 (84%), Positives = 63/65 (96%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 236 VPRAV 250
VPRAV
Sbjct: 61 VPRAV 65
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 142 bits (344), Expect = 1e-34
Identities = 62/71 (87%), Positives = 67/71 (94%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD IR+LAD
Sbjct: 69 DLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADN 128
Query: 436 CTGLQGFLIFH 468
CTGLQGFL+FH
Sbjct: 129 CTGLQGFLVFH 139
Score = 135 bits (327), Expect = 1e-32
Identities = 56/66 (84%), Positives = 64/66 (96%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 233 HVPRAV 250
HVPRAV
Sbjct: 61 HVPRAV 66
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 142 bits (344), Expect = 1e-34
Identities = 62/71 (87%), Positives = 67/71 (94%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD IR+LAD
Sbjct: 69 DLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADN 128
Query: 436 CTGLQGFLIFH 468
CTGLQGFL+FH
Sbjct: 129 CTGLQGFLVFH 139
Score = 135 bits (327), Expect = 1e-32
Identities = 56/66 (84%), Positives = 64/66 (96%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 233 HVPRAV 250
HVPRAV
Sbjct: 61 HVPRAV 66
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 136 bits (329), Expect = 7e-33
Identities = 57/71 (80%), Positives = 67/71 (94%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD IR+LAD
Sbjct: 67 DLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADN 126
Query: 436 CTGLQGFLIFH 468
C+GLQGF +FH
Sbjct: 127 CSGLQGFFVFH 137
Score = 114 bits (275), Expect = 3e-26
Identities = 50/67 (74%), Positives = 58/67 (86%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 233 HVPRAVF 253
+VPR++F
Sbjct: 59 YVPRSIF 65
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 136 bits (329), Expect = 7e-33
Identities = 57/71 (80%), Positives = 67/71 (94%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD IR+LAD
Sbjct: 67 DLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADN 126
Query: 436 CTGLQGFLIFH 468
C+GLQGF +FH
Sbjct: 127 CSGLQGFFVFH 137
Score = 113 bits (272), Expect = 6e-26
Identities = 49/67 (73%), Positives = 58/67 (86%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 233 HVPRAVF 253
+VPR++F
Sbjct: 59 YVPRSIF 65
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 136 bits (329), Expect = 7e-33
Identities = 57/71 (80%), Positives = 67/71 (94%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD IR+LAD
Sbjct: 67 DLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADN 126
Query: 436 CTGLQGFLIFH 468
C+GLQGF +FH
Sbjct: 127 CSGLQGFFVFH 137
Score = 113 bits (272), Expect = 6e-26
Identities = 49/67 (73%), Positives = 58/67 (86%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 233 HVPRAVF 253
+VPR++F
Sbjct: 59 YVPRSIF 65
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 136 bits (329), Expect = 7e-33
Identities = 57/71 (80%), Positives = 67/71 (94%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD IR+LAD
Sbjct: 67 DLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADN 126
Query: 436 CTGLQGFLIFH 468
C+GLQGF +FH
Sbjct: 127 CSGLQGFFVFH 137
Score = 114 bits (275), Expect = 3e-26
Identities = 50/67 (74%), Positives = 58/67 (86%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 233 HVPRAVF 253
+VPR++F
Sbjct: 59 YVPRSIF 65
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 132 bits (320), Expect = 9e-32
Identities = 55/71 (77%), Positives = 65/71 (91%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD IR+LAD
Sbjct: 67 DLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADN 126
Query: 436 CTGLQGFLIFH 468
C+GLQGF +FH
Sbjct: 127 CSGLQGFFVFH 137
Score = 112 bits (269), Expect = 1e-25
Identities = 49/67 (73%), Positives = 58/67 (86%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 233 HVPRAVF 253
+VPR++F
Sbjct: 59 YVPRSIF 65
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 132 bits (320), Expect = 9e-32
Identities = 55/71 (77%), Positives = 65/71 (91%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD IR+LAD
Sbjct: 67 DLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADN 126
Query: 436 CTGLQGFLIFH 468
C+GLQGF +FH
Sbjct: 127 CSGLQGFFVFH 137
Score = 112 bits (269), Expect = 1e-25
Identities = 49/67 (73%), Positives = 58/67 (86%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 233 HVPRAVF 253
+VPR++F
Sbjct: 59 YVPRSIF 65
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 131 bits (316), Expect = 3e-31
Identities = 54/71 (76%), Positives = 65/71 (91%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+D +R+L +
Sbjct: 74 DLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVEN 133
Query: 436 CTGLQGFLIFH 468
C GLQGFL+FH
Sbjct: 134 CRGLQGFLVFH 144
Score = 117 bits (282), Expect = 4e-27
Identities = 50/67 (74%), Positives = 58/67 (86%)
Frame = +2
Query: 50 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 229
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 230 KHVPRAV 250
KHVPRA+
Sbjct: 65 KHVPRAI 71
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 130 bits (314), Expect = 5e-31
Identities = 55/71 (77%), Positives = 66/71 (92%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D +R+L ++
Sbjct: 69 DLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTER 128
Query: 436 CTGLQGFLIFH 468
C LQGFLIFH
Sbjct: 129 CQSLQGFLIFH 139
Score = 119 bits (287), Expect = 9e-28
Identities = 50/67 (74%), Positives = 57/67 (85%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 233 HVPRAVF 253
HVPRA+F
Sbjct: 61 HVPRAIF 67
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 130 bits (313), Expect = 6e-31
Identities = 54/71 (76%), Positives = 64/71 (90%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD IR+LA+
Sbjct: 66 DLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANN 125
Query: 436 CTGLQGFLIFH 468
C GLQGF +FH
Sbjct: 126 CEGLQGFFVFH 136
Score = 101 bits (243), Expect = 2e-22
Identities = 46/67 (68%), Positives = 51/67 (76%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 233 HVPRAVF 253
HVPR++F
Sbjct: 58 HVPRSIF 64
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 127 bits (306), Expect = 5e-30
Identities = 54/75 (72%), Positives = 66/75 (88%)
Frame = +1
Query: 244 CCLRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRK 423
C DLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+D +++
Sbjct: 71 CLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKR 130
Query: 424 LADQCTGLQGFLIFH 468
LA+ C GLQGF+IFH
Sbjct: 131 LAENCNGLQGFVIFH 145
Score = 104 bits (250), Expect = 3e-23
Identities = 45/66 (68%), Positives = 51/66 (77%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 236 VPRAVF 253
VPR +F
Sbjct: 68 VPRCLF 73
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 127 bits (306), Expect = 5e-30
Identities = 54/75 (72%), Positives = 66/75 (88%)
Frame = +1
Query: 244 CCLRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRK 423
C DLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+D +++
Sbjct: 43 CLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKR 102
Query: 424 LADQCTGLQGFLIFH 468
LA+ C GLQGF+IFH
Sbjct: 103 LAENCNGLQGFVIFH 117
Score = 60.9 bits (141), Expect = 4e-10
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +2
Query: 119 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 253
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +F
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLF 45
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 123 bits (297), Expect = 6e-29
Identities = 52/71 (73%), Positives = 61/71 (85%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLD IRK +
Sbjct: 72 DLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTEN 131
Query: 436 CTGLQGFLIFH 468
C GLQGFL+FH
Sbjct: 132 CEGLQGFLVFH 142
Score = 87.4 bits (207), Expect = 4e-18
Identities = 36/66 (54%), Positives = 47/66 (71%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 236 VPRAVF 253
VPRA++
Sbjct: 65 VPRAIY 70
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 89.8 bits (213), Expect = 8e-19
Identities = 39/74 (52%), Positives = 51/74 (68%)
Frame = +1
Query: 247 CLRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKL 426
CL DLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD++RK
Sbjct: 64 CLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKE 123
Query: 427 ADQCTGLQGFLIFH 468
A+ C LQGF + H
Sbjct: 124 AESCDCLQGFQMTH 137
Score = 53.6 bits (123), Expect = 7e-08
Identities = 26/65 (40%), Positives = 35/65 (53%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 233 HVPRA 247
+VPRA
Sbjct: 59 YVPRA 63
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 86.6 bits (205), Expect = 8e-18
Identities = 39/73 (53%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD+IRK A
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 125 EGCDCLQGFQLTH 137
Score = 58.0 bits (134), Expect = 3e-09
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDL--QLERIDVYYNEANNGK 58
Query: 233 HVPRAV 250
+VPRAV
Sbjct: 59 YVPRAV 64
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 86.6 bits (205), Expect = 8e-18
Identities = 39/73 (53%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD+IRK A
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 125 EGCDCLQGFQLTH 137
Score = 57.6 bits (133), Expect = 4e-09
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDL--QLERIDVYYNEANNGK 58
Query: 233 HVPRAV 250
+VPRAV
Sbjct: 59 YVPRAV 64
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 86.2 bits (204), Expect = 1e-17
Identities = 38/73 (52%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD++RK A
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 125 EGCDCLQGFQLTH 137
Score = 59.3 bits (137), Expect = 1e-09
Identities = 29/66 (43%), Positives = 38/66 (57%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 233 HVPRAV 250
+VPRAV
Sbjct: 59 YVPRAV 64
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 82.6 bits (195), Expect = 1e-16
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD++RK A
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ LQGF + H
Sbjct: 125 ESTDCLQGFQLTH 137
Score = 59.7 bits (138), Expect = 1e-09
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 233 HVPRAV 250
+VPRAV
Sbjct: 59 YVPRAV 64
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 82.6 bits (195), Expect = 1e-16
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD++RK A
Sbjct: 65 LVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ LQGF + H
Sbjct: 125 ESTDCLQGFQLTH 137
Score = 59.7 bits (138), Expect = 1e-09
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 233 HVPRAV 250
+VPRAV
Sbjct: 59 YVPRAV 64
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 71.7 bits (168), Expect = 2e-13
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL +IR+ A
Sbjct: 65 LVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREA 124
Query: 430 DQCTGLQGFLIFH 468
+ L+GF + H
Sbjct: 125 EAADSLEGFQLIH 137
Score = 52.8 bits (121), Expect = 1e-07
Identities = 27/66 (40%), Positives = 36/66 (54%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 233 HVPRAV 250
+VPRA+
Sbjct: 59 YVPRAI 64
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 71.7 bits (168), Expect = 2e-13
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL +IR+ A
Sbjct: 65 LVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREA 124
Query: 430 DQCTGLQGFLIFH 468
+ L+GF + H
Sbjct: 125 EAADSLEGFQLIH 137
Score = 52.8 bits (121), Expect = 1e-07
Identities = 27/66 (40%), Positives = 36/66 (54%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 233 HVPRAV 250
+VPRA+
Sbjct: 59 YVPRAI 64
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 40.3 bits (90), Expect = 7e-04
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +1
Query: 250 LRDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDIIR 420
L DLEP V++ + ++ + LF+ + + A NN+A G Y G+E+ + ++DII
Sbjct: 67 LVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIII 125
Query: 421 KLADQCTGLQGFLIFH 468
+ A+ L G L H
Sbjct: 126 REAENTNNLDGILFTH 141
Score = 39.9 bits (89), Expect = 9e-04
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +2
Query: 65 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 244
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 245 AV 250
AV
Sbjct: 65 AV 66
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 40.3 bits (90), Expect = 7e-04
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +1
Query: 250 LRDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDIIR 420
L DLEP V++ + ++ + LF+ + + A NN+A G Y G+E+ + ++DII
Sbjct: 67 LVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIII 125
Query: 421 KLADQCTGLQGFLIFH 468
+ A+ L G L H
Sbjct: 126 REAENTNNLDGILFTH 141
Score = 39.9 bits (89), Expect = 9e-04
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +2
Query: 65 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 244
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 245 AV 250
AV
Sbjct: 65 AV 66
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 30.7 bits (66), Expect = 0.54
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 81 AKPESRSVMPAGSFTVWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 236
A P MP+ S S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical
protein F36D4.5b protein.
Length = 315
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 81 AKPESRSVMPAGSFTVWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVLSS 254
++ +SRS P F +W+T + + QT P+G T++ S++ ++ P +S
Sbjct: 248 SEKKSRSNSPP-IFRIWNTIKATINGTQQTAPTGAATVIPASSASNIGKTNSTPGTTS 304
>U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical
protein F36D4.5a protein.
Length = 334
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 81 AKPESRSVMPAGSFTVWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVLSS 254
++ +SRS P F +W+T + + QT P+G T++ S++ ++ P +S
Sbjct: 267 SEKKSRSNSPP-IFRIWNTIKATINGTQQTAPTGAATVIPASSASNIGKTNSTPGTTS 323
>AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassium
channel protein.
Length = 580
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 157 DAHRQDHRGWRRFFQHFLQRDRSWQARTPCCLRDL 261
DAHR R RR ++F+ R R QAR P +RD+
Sbjct: 422 DAHRNAIRAIRRV-KYFVARRRFQQARKPYDVRDV 455
>AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical
protein Y54G9A.3 protein.
Length = 621
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 157 DAHRQDHRGWRRFFQHFLQRDRSWQARTPCCLRDL 261
DAHR R RR ++F+ R R QAR P +RD+
Sbjct: 463 DAHRNAIRAIRRV-KYFVARRRFQQARKPYDVRDV 496
>AF324489-1|AAK49910.1| 351|Caenorhabditis elegans F44C8.7-like
protein protein.
Length = 351
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 319 EQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLAD 432
E ++TGK N+ TIG IV L + ++ K AD
Sbjct: 246 EAVLTGKMFFGWNWIVWFVTIGNSIVGLCISLVMKYAD 283
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 271 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 411
VV +++TG + PE+ + E A+N+Y + Y + K V ++D
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIID 669
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 271 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 411
VV +++TG + PE+ + E A+N+Y + Y + K V ++D
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIID 883
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 271 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 411
VV +++TG + PE+ + E A+N+Y + Y + K V ++D
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIID 1019
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 271 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 411
VV +++TG + PE+ + E A+N+Y + Y + K V ++D
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIID 1068
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 271 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 411
VV +++TG + PE+ + E A+N+Y + Y + K V ++D
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIID 1068
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 271 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 411
VV +++TG + PE+ + E A+N+Y + Y + K V ++D
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIID 1060
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 271 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 411
VV +++TG + PE+ + E A+N+Y + Y + K V ++D
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIID 1071
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 271 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 411
VV +++TG + PE+ + E A+N+Y + Y + K V ++D
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIID 1072
>AF016438-4|AAB65894.2| 351|Caenorhabditis elegans Hypothetical
protein F44C8.7 protein.
Length = 351
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 319 EQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLAD 432
E ++TGK N+ TIG IV L + ++ K AD
Sbjct: 246 EAVLTGKMFFGWNWIVWFVTIGNSIVGLCISLVMKYAD 283
>Z37983-10|CAA86060.4| 267|Caenorhabditis elegans Hypothetical
protein B0393.7 protein.
Length = 267
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 466 GRSGILADRYTGQRACGLCPKP 401
G+ IL D GQ+ CG C +P
Sbjct: 71 GQGTILCDAGVGQKRCGKCVRP 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,814,452
Number of Sequences: 27780
Number of extensions: 258343
Number of successful extensions: 788
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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