Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0539
(469 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 149 1e-36
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 149 1e-36
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 147 3e-36
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 147 3e-36
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 139 1e-33
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 139 1e-33
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 135 1e-32
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 91 3e-19
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 89 1e-18
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 89 1e-18
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 89 1e-18
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 87 4e-18
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 87 7e-18
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 87 7e-18
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 86 1e-17
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 82 2e-16
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 54 5e-08
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 54 5e-08
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 30 0.90
At1g07160.1 68414.m00762 protein phosphatase 2C, putative / PP2C... 29 1.2
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 1.6
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 29 2.1
At1g08080.1 68414.m00884 carbonic anhydrase family protein simil... 29 2.1
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 28 3.6
At1g66690.1 68414.m07580 S-adenosyl-L-methionine:carboxyl methyl... 28 3.6
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 28 3.6
At1g43245.1 68414.m04985 expressed protein 27 8.4
At1g06470.2 68414.m00686 phosphate translocator-related low simi... 27 8.4
At1g06470.1 68414.m00685 phosphate translocator-related low simi... 27 8.4
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 149 bits (360), Expect = 1e-36
Identities = 60/67 (89%), Positives = 67/67 (100%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 233 HVPRAVF 253
HVPRAVF
Sbjct: 61 HVPRAVF 67
Score = 140 bits (338), Expect = 6e-34
Identities = 63/71 (88%), Positives = 68/71 (95%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD IRKLAD
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 436 CTGLQGFLIFH 468
CTGLQGFL+F+
Sbjct: 129 CTGLQGFLVFN 139
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 149 bits (360), Expect = 1e-36
Identities = 60/67 (89%), Positives = 67/67 (100%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 233 HVPRAVF 253
HVPRAVF
Sbjct: 61 HVPRAVF 67
Score = 140 bits (338), Expect = 6e-34
Identities = 63/71 (88%), Positives = 68/71 (95%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD IRKLAD
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 436 CTGLQGFLIFH 468
CTGLQGFL+F+
Sbjct: 129 CTGLQGFLVFN 139
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 147 bits (357), Expect = 3e-36
Identities = 60/67 (89%), Positives = 66/67 (98%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 233 HVPRAVF 253
HVPRAVF
Sbjct: 61 HVPRAVF 67
Score = 140 bits (338), Expect = 6e-34
Identities = 63/71 (88%), Positives = 68/71 (95%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD IRKLAD
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 436 CTGLQGFLIFH 468
CTGLQGFL+F+
Sbjct: 129 CTGLQGFLVFN 139
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 147 bits (357), Expect = 3e-36
Identities = 60/67 (89%), Positives = 66/67 (98%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 233 HVPRAVF 253
HVPRAVF
Sbjct: 61 HVPRAVF 67
Score = 140 bits (338), Expect = 6e-34
Identities = 63/71 (88%), Positives = 68/71 (95%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD IRKLAD
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 436 CTGLQGFLIFH 468
CTGLQGFL+F+
Sbjct: 129 CTGLQGFLVFN 139
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 139 bits (336), Expect = 1e-33
Identities = 61/71 (85%), Positives = 68/71 (95%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD +RKLAD
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADN 128
Query: 436 CTGLQGFLIFH 468
CTGLQGFL+F+
Sbjct: 129 CTGLQGFLVFN 139
Score = 130 bits (314), Expect = 5e-31
Identities = 53/67 (79%), Positives = 61/67 (91%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 233 HVPRAVF 253
HVPRAVF
Sbjct: 61 HVPRAVF 67
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 139 bits (336), Expect = 1e-33
Identities = 61/71 (85%), Positives = 68/71 (95%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLADQ 435
DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD +RKLAD
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADN 128
Query: 436 CTGLQGFLIFH 468
CTGLQGFL+F+
Sbjct: 129 CTGLQGFLVFN 139
Score = 130 bits (314), Expect = 5e-31
Identities = 53/67 (79%), Positives = 61/67 (91%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 233 HVPRAVF 253
HVPRAVF
Sbjct: 61 HVPRAVF 67
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 135 bits (327), Expect = 1e-32
Identities = 62/91 (68%), Positives = 71/91 (78%)
Frame = +1
Query: 196 FQHFLQRDRSWQARTPCCLRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 375
F F S Q DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 376 TIGKEIVDLVLDIIRKLADQCTGLQGFLIFH 468
T+G+EIVD L+ +RKLAD CTGLQGFL+F+
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGFLVFN 139
Score = 125 bits (301), Expect = 2e-29
Identities = 50/67 (74%), Positives = 60/67 (89%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 233 HVPRAVF 253
HVPRAVF
Sbjct: 61 HVPRAVF 67
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 91.1 bits (216), Expect = 3e-19
Identities = 38/73 (52%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 56.4 bits (130), Expect = 9e-09
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 223
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 224 AGKHVPRAV 250
G++VPRA+
Sbjct: 56 CGRYVPRAI 64
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 89.0 bits (211), Expect = 1e-18
Identities = 37/73 (50%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 52.4 bits (120), Expect = 1e-07
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 233 HVPRAV 250
VPRAV
Sbjct: 59 FVPRAV 64
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 89.0 bits (211), Expect = 1e-18
Identities = 37/73 (50%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 53.2 bits (122), Expect = 8e-08
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 233 HVPRAV 250
+VPRAV
Sbjct: 59 YVPRAV 64
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 89.0 bits (211), Expect = 1e-18
Identities = 36/73 (49%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 66 LMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 125
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 126 ENCDCLQGFQVCH 138
Score = 56.8 bits (131), Expect = 7e-09
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 233 HVPRAV 250
+VPRAV
Sbjct: 60 YVPRAV 65
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 87.4 bits (207), Expect = 4e-18
Identities = 35/73 (47%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 66 LMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 125
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 126 ENCDCLQGFQVCH 138
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 233 HVPRAV 250
+VPRAV
Sbjct: 60 YVPRAV 65
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 86.6 bits (205), Expect = 7e-18
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 65 LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 57.6 bits (133), Expect = 4e-09
Identities = 27/66 (40%), Positives = 37/66 (56%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 233 HVPRAV 250
VPRAV
Sbjct: 59 FVPRAV 64
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 86.6 bits (205), Expect = 7e-18
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 65 LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 57.6 bits (133), Expect = 4e-09
Identities = 27/66 (40%), Positives = 37/66 (56%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 233 HVPRAV 250
VPRAV
Sbjct: 59 FVPRAV 64
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 86.2 bits (204), Expect = 1e-17
Identities = 35/73 (47%), Positives = 51/73 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ C LQGF + H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 57.2 bits (132), Expect = 5e-09
Identities = 29/66 (43%), Positives = 37/66 (56%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 233 HVPRAV 250
+VPRAV
Sbjct: 59 YVPRAV 64
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 82.2 bits (194), Expect = 2e-16
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDIIRKLA 429
L DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD++RK A
Sbjct: 65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 430 DQCTGLQGFLIFH 468
+ LQGF + H
Sbjct: 125 ENSDCLQGFQVCH 137
Score = 55.6 bits (128), Expect = 2e-08
Identities = 28/66 (42%), Positives = 37/66 (56%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 233 HVPRAV 250
+VPRAV
Sbjct: 59 YVPRAV 64
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 54.0 bits (124), Expect = 5e-08
Identities = 28/65 (43%), Positives = 37/65 (56%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 236 VPRAV 250
+PRA+
Sbjct: 61 IPRAL 65
Score = 52.4 bits (120), Expect = 1e-07
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDIIRK 423
L DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D+I +
Sbjct: 66 LIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMDMIDR 124
Query: 424 LADQCTGLQGFLIFH 468
AD L+GF++ H
Sbjct: 125 EADGSDSLEGFVLCH 139
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 54.0 bits (124), Expect = 5e-08
Identities = 28/65 (43%), Positives = 37/65 (56%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 236 VPRAV 250
+PRA+
Sbjct: 61 IPRAL 65
Score = 52.8 bits (121), Expect = 1e-07
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDIIRK 423
L DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D+I +
Sbjct: 66 LIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMDMIDR 124
Query: 424 LADQCTGLQGFLIFH 468
AD L+GF++ H
Sbjct: 125 EADGSDSLEGFVLCH 139
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 29.9 bits (64), Expect = 0.90
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 276 NNSRFKIAKTARGTCLPAPVSLKKVLKESSPPPM 175
N R K A ++ + L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At1g07160.1 68414.m00762 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase 2C GI:2582800
from [Medicago sativa]
Length = 380
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 126 VWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVLSSRS*TYC 272
V+S +SSL P ET+ +LS P ++ST P +S + +C
Sbjct: 12 VFSPSSSLFCNKPLNTSPAHETLTLSLSHLNPPVSSTSPSAASPTSPFC 60
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 222 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 97
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 28.7 bits (61), Expect = 2.1
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = -1
Query: 253 EDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQTVKLPAGITD---LDSG- 86
E G+ + SG + E + ++ D + H A DA+++ T +D G
Sbjct: 750 EQILGWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDVGS 809
Query: 85 LANVYRDALTHFN 47
ANVYR LTHF+
Sbjct: 810 AANVYRIVLTHFS 822
>At1g08080.1 68414.m00884 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 275
Score = 28.7 bits (61), Expect = 2.1
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +1
Query: 238 TPCCLRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDII 417
TP C +++ +VV +VRT T +Q+ + L D AN+ AR K IV L I+
Sbjct: 219 TPPCTQNVTWSVVRKVRTVTRKQV---KLLRVAVHDDANSNARPVQPTNKRIVHLYRPIV 275
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.9 bits (59), Expect = 3.6
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = -1
Query: 421 CGLCPKPNRRFPFQWCSDHGHSCWPHLPYQ 332
C + P PN + PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At1g66690.1 68414.m07580 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
defense-related protein cjs1 [Brassica
carinata][GI:14009292][Mol Plant Pathol (2001)
2(3):159-169]
Length = 353
Score = 27.9 bits (59), Expect = 3.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 160 HLAIRLDAVLQTVKLPAGITDLDSGLAN 77
H+A+ A L T K+P GI D DS L N
Sbjct: 140 HIAVMSYAFLFTSKIPKGIMDRDSPLWN 167
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 27.9 bits (59), Expect = 3.6
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = -1
Query: 421 CGLCPKPNRRFPFQWCSDHGHSCWPHLPYQ 332
C + P PN + PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
>At1g43245.1 68414.m04985 expressed protein
Length = 558
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 432 VSELADYVQNQIDDFLSN 379
V ++ DY+Q IDDFLS+
Sbjct: 313 VGKMNDYIQEAIDDFLSD 330
>At1g06470.2 68414.m00686 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 414
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 288 HWHIQTVVSSRTTYYW*GR 344
H+ IQ V+S T+YW GR
Sbjct: 114 HFSIQAVLSKMITWYWSGR 132
>At1g06470.1 68414.m00685 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 414
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 288 HWHIQTVVSSRTTYYW*GR 344
H+ IQ V+S T+YW GR
Sbjct: 114 HFSIQAVLSKMITWYWSGR 132
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,225,753
Number of Sequences: 28952
Number of extensions: 245019
Number of successful extensions: 847
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 791932800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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