Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0537
         (595 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   1.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   6.9  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              21   9.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.1  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 567 NPPTNTLQLRNITTLTTNAIKS 502
           N P   L+L NITT T ++I S
Sbjct: 93  NKPFKRLELFNITTTTIHSIHS 114


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 106 VALKHFYFYF*HN 68
           V L HFYF   HN
Sbjct: 226 VGLNHFYFMLNHN 238


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 106 VALKHFYFYF*HN 68
           V L HFYF   HN
Sbjct: 226 VGLNHFYFMLNHN 238


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 202 GERGYVGSWERLPMPAERYFFPQHCSLDRSVMVA 101
           G +G   SW R    A RY +      DR ++++
Sbjct: 543 GVKGIPCSWGRAINVANRYVYASQPDKDRVLVIS 576


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 334 LRCGSDCITNRVKFVN 287
           L C  DC+  +V FVN
Sbjct: 59  LACYVDCMLKKVGFVN 74


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 96  LSATITLRSKEQCCGKK*RSAGIGSR 173
           L+ T ++ S    C K  ++AG GSR
Sbjct: 567 LARTPSVMSASSTCKKDKKNAGSGSR 592


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,550
Number of Sequences: 438
Number of extensions: 3501
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)