Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0536
(595 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53417| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_30266| Best HMM Match : Fzo_mitofusin (HMM E-Value=1.2) 45 5e-05
SB_42301| Best HMM Match : Keratin_B2 (HMM E-Value=1.2) 31 0.53
SB_17449| Best HMM Match : DAD (HMM E-Value=1.7) 31 0.93
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 29 2.1
SB_19807| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_44102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_23698| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_18598| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_364| Best HMM Match : Tim17 (HMM E-Value=0.45) 29 3.7
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 28 4.9
SB_16636| Best HMM Match : EGF (HMM E-Value=7.6e-07) 28 4.9
SB_7399| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_20962| Best HMM Match : Microvir_J (HMM E-Value=4.8) 28 4.9
SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11) 25 5.2
SB_57228| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_31792| Best HMM Match : DUF1373 (HMM E-Value=2.5) 28 6.5
SB_24674| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_54208| Best HMM Match : fn3 (HMM E-Value=0) 27 8.6
SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_53417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/48 (45%), Positives = 25/48 (52%)
Frame = +3
Query: 105 ADGPGSESNKQNKAKTAEPNIDFELDVKVHINSGKCVLHTKEPLKDDE 248
AD S A + N+DFELDV V I GKCVLHT + DE
Sbjct: 38 ADVQDQSSESPRPAALPQQNLDFELDVTVDIEGGKCVLHTCDTADKDE 85
>SB_30266| Best HMM Match : Fzo_mitofusin (HMM E-Value=1.2)
Length = 1052
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/48 (45%), Positives = 25/48 (52%)
Frame = +3
Query: 105 ADGPGSESNKQNKAKTAEPNIDFELDVKVHINSGKCVLHTKEPLKDDE 248
AD S A + N+DFELDV V I GKCVLHT + DE
Sbjct: 564 ADVQDQSSESPRPAALPQQNLDFELDVTVDIEGGKCVLHTCDTADKDE 611
>SB_42301| Best HMM Match : Keratin_B2 (HMM E-Value=1.2)
Length = 600
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 442 SRNSEDGEVQYGLVSRRWGLAACSRGRPPGT 350
S +SE+ +V VS W +CS G PPGT
Sbjct: 74 SSSSEELDVYVRSVSPSWTSGSCSNGHPPGT 104
>SB_17449| Best HMM Match : DAD (HMM E-Value=1.7)
Length = 414
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 330 LARGQWGVPGGRPRLHAASPQRLDTSPYWTSPSSEFRDLTSRYITSRKPYRRKF 491
L GQ PGG P+L SP++ + P +SP S R + Y T ++ + F
Sbjct: 279 LGLGQGLKPGGLPKLSPVSPRKSLSLP--SSPGSPVRTVLEDYSTEKEQIEQLF 330
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +3
Query: 3 GVQRQSSLPAHPD-RWPDD---IEHVQLRKKHDHSVPPADGPGSESNKQNKAKTAE 158
G R+SS+ ++ D R P D +H +K +HS+P A+ + +NK++ AE
Sbjct: 562 GPDRESSVGSYDDEREPRDHKPSQHQDYPEKPEHSIPKAENRERMPSVENKSELAE 617
>SB_19807| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 462 TSRKPYRRKFRHPKRRLKESRNQESVP 542
T KP R+ R+P+RRL+E R+ + P
Sbjct: 6 TRHKPAARRVRNPRRRLEEERSGYTCP 32
>SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1810
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 416 PVRAGVEALGACGVQPWATPRHP 348
PVRA ++ A G P ATP HP
Sbjct: 1368 PVRASASSISALGPAPSATPFHP 1390
>SB_44102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -1
Query: 205 PLLMCTLTSSSKSMFGSAVLALFCLLLSEPGPSAGGTEWSCFFRSC 68
PL + S + +++ + +LL+ PGP GT+ F+ +C
Sbjct: 133 PLKYYNIVSERRCFLSISLVWVMSILLAVPGPFLSGTDLGIFWLNC 178
>SB_23698| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 394 RWGLAACSRGRPPGTPHCPRASRVGSCSTS 305
RW +A RGR P PHC + + S S S
Sbjct: 31 RWNVAQFFRGRHPTCPHCRAKASLPSPSPS 60
>SB_18598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = -1
Query: 211 HFPLL-MCTLTSSSKSMFGSAVL-ALFCLLLSEPGPSAGGTEWSCFFRSCTCSMSSGQRS 38
HF +L + L+ K M G AV+ A C L P P A G C R T S R
Sbjct: 206 HFVVLALLWLSRDPKFMPGWAVMFAKGCASLHAPRPVASGGGGGCISRHLTFSRGIQWRI 265
Query: 37 GCAGS 23
C G+
Sbjct: 266 RCRGT 270
>SB_364| Best HMM Match : Tim17 (HMM E-Value=0.45)
Length = 437
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -1
Query: 178 SSKSMFGSAVLALFCLLLSEPGPSAGGTEWSCFFRSCTCSMSSGQRSGCA 29
S+ + S+V+ + CLL+S G C+ +C S SG+R G A
Sbjct: 113 SNSAWSASSVIGVACLLVSLIGLYTPSYRSPCYRSACYRSACSGRRRGSA 162
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +1
Query: 376 TPQAPSASTPARTGPHRLQSSGT*PQGTLRVENRTGGSSVTPNDASRKVGT 528
TP PS +TP T P + + T P T + ++ TP + K T
Sbjct: 35 TPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPT 85
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 420 SPSSEFRDLTSRYITSRKPYRRKFRHPKRRLKESRNQE 533
SP+ + R TS SRK +RK H + K+S+ +E
Sbjct: 388 SPTPDSRSQTSNGDKSRKHRKRKKTHKHKHAKKSKTEE 425
>SB_16636| Best HMM Match : EGF (HMM E-Value=7.6e-07)
Length = 302
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +3
Query: 198 NSGKCVLHTK---EPLKDDEIKLEGVCASVGQ 284
N C+LH K +P K + K +G C VGQ
Sbjct: 219 NLASCLLHNKPSADPCKPNPCKHDGYCVQVGQ 250
>SB_7399| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +2
Query: 110 RSGLGEQQTEQGQNCGAEHRL*TGRQSAHQQREMRAAHQGTFEG*RN*IGGRMRVGRSTS 289
RS +G Q E N G + + Q+E R+ G + R+ +GG + RS
Sbjct: 144 RSNMGGDQKEHRSNMGGDQKERRSYVGGGDQKEHRSNVGGDQKEHRSNMGGDQKEHRSNM 203
Query: 290 GG 295
GG
Sbjct: 204 GG 205
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +3
Query: 393 RLDTSPYWTSPSSEFRDLTSRYITSRKPYRRKFRHPKRRLKESRNQES 536
R +TS + +SP R TSR+ TSR + RH R+ + SR++ S
Sbjct: 38 RHETSRHESSPHETSRHETSRHETSR---HERSRHETRQHERSRHKTS 82
>SB_20962| Best HMM Match : Microvir_J (HMM E-Value=4.8)
Length = 329
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2
Query: 110 RSGLGEQQTEQGQNCGA---EHRL*TGRQSAHQQREMRAAHQGTFEG*RN*IGGRMRVGR 280
RS +G Q E+ N G EHR G Q+E R++ G + R+ +GG + R
Sbjct: 207 RSNVGGDQKERRSNVGGDQKEHRSNVGGD----QKERRSSVGGDQKEHRSNVGGDQKEHR 262
Query: 281 STSGG 295
S GG
Sbjct: 263 SNMGG 267
>SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11)
Length = 1692
Score = 25.4 bits (53), Expect(2) = 5.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 368 WATPRHPPLPPR*QGWELQY 309
+ TPR PPL Q W L Y
Sbjct: 395 YETPRRPPLQTNYQPWSLGY 414
Score = 21.0 bits (42), Expect(2) = 5.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 371 PWATPRHPP 345
P ATPR+PP
Sbjct: 368 PTATPRYPP 376
>SB_57228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +3
Query: 24 LPAHPDRWPDDIEHVQLRKKHDHSVPPA--DGP-GSESNKQNKAKTAEPNIDFELDVKVH 194
LP H RW D E ++ ++ H + D P SES K +K + PN++ + VH
Sbjct: 599 LPTHGFRWMTDREMTEVDLEYPHYLHDLHNDYPLASESVKVDKVEKLIPNLNNKTKYVVH 658
>SB_31792| Best HMM Match : DUF1373 (HMM E-Value=2.5)
Length = 696
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 411 YWTSPSSEFRDLTSRYITSRKPYRRKFRH 497
Y S + D S Y+ R+P+RR+FR+
Sbjct: 501 YGGSDLLPYEDRRSHYLRHRRPHRRRFRY 529
>SB_24674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 578
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 453 RYITSRKPYRRKFRHPKRRLKESRNQESVPVRVDNAAEAFPERRTNH 593
R+I+ R+ K + ++ R + S DNA E FP + TNH
Sbjct: 449 RWISRRQTENEKTQRHNMEIRSKRVEVSTK---DNAIENFPTQNTNH 492
>SB_54208| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1292
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +1
Query: 19 ARCRR-TPTAGPTTSSTCSCGRNMTT 93
AR RR AG T TC C RN+TT
Sbjct: 886 ARTRRGVGPAGVTFGETCRCKRNLTT 911
>SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1735
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/69 (24%), Positives = 28/69 (40%)
Frame = +3
Query: 6 VQRQSSLPAHPDRWPDDIEHVQLRKKHDHSVPPADGPGSESNKQNKAKTAEPNIDFELDV 185
V+R PA +D E V + P GP +S + ++ + N E D
Sbjct: 890 VKRNKGKPARLQDHEEDEEPVASTSATGITKTPGKGPNPKSARSTRSSRKKKNEKEEEDD 949
Query: 186 KVHINSGKC 212
+ + SG+C
Sbjct: 950 DLSVPSGEC 958
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 346 HCPRASRVGSCSTSL*QTPRC*PTDAHTPSNLISSSFKGSLVCS 215
H +++ SC TP+ PT HT + L SSF +VCS
Sbjct: 421 HIALPNKLMSCRRPFMGTPKSVPTYPHTHNTLAKSSF---IVCS 461
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,208,268
Number of Sequences: 59808
Number of extensions: 436422
Number of successful extensions: 1636
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1632
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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