Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0536
         (595 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    27   0.46 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   2.4  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   3.2  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   4.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   5.6  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    23   5.6  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   5.6  
AY748840-1|AAV28188.1|  104|Anopheles gambiae cytochrome P450 pr...    23   7.4  

>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 27.1 bits (57), Expect = 0.46
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 358 PGTPHCPRASRVGSCSTSL 302
           PGT  C  + R+GSCS S+
Sbjct: 82  PGTEPCQSSDRLGSCSKSM 100


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -3

Query: 380 GVQPWATPRHPPLP-PR*QGWELQYQ 306
           G QP A+PR PP P PR    + Q Q
Sbjct: 194 GGQPSASPRQPPTPLPRRSSAQPQQQ 219


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 499 PNDASRKVGTKKAFLFAWITLQKHSPKEE 585
           PN  +  +G  K+F   +I +  HSP+ E
Sbjct: 126 PNQVNLTLGLGKSFDITYIRIVFHSPRPE 154


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +3

Query: 426 SSEFR-DLTSRYITSRKPYRRKFRHPKRR 509
           SSE R DL   YI +R   +RK +  KRR
Sbjct: 297 SSEQREDLRRLYILARSNLKRKIKASKRR 325


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 117 GSESNKQNKAKTAEPNIDFELDVKVHIN 200
           G+  N+QN AK     +D  L+ K HI+
Sbjct: 835 GTAVNRQNHAKDLGVLLDSSLNFKQHID 862


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 66  VQLRKKHDHSVPPADGPGSESNKQNKAK 149
           V L   H H V P +GP +  NK  + +
Sbjct: 205 VNLHHWHWHLVYPGEGPNNVVNKDRRGE 232


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = +3

Query: 465 SRKPYRRKFRHPKRRLKESRNQESVPVRVDNAAEA-FPERRT 587
           +RKP+   F     ++K S   E  PV++ +  E  FP   T
Sbjct: 341 ARKPWGLAFNTLMNKVKSSEPVEQCPVKLKSIIETLFPTHPT 382


>AY748840-1|AAV28188.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +3

Query: 36  PDRW-PDDIEHVQLRKKHDHSVP 101
           P+R+  DD +  QL  +HD SVP
Sbjct: 70  PERFLSDDGQQQQLALEHDRSVP 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,731
Number of Sequences: 2352
Number of extensions: 13796
Number of successful extensions: 52
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)