Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0536
(595 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 3.0
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 3.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 3.9
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 3.9
AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding pr... 22 5.2
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.1
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 9.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 9.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 9.1
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 9.1
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 9.1
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 21 9.1
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -1
Query: 79 FRSCTCSMSSGQRSGCAGSELWR 11
FR CS+ SG E+WR
Sbjct: 14 FRESRCSVRCSAASGLRWFEIWR 36
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/36 (25%), Positives = 15/36 (41%)
Frame = +3
Query: 3 GVQRQSSLPAHPDRWPDDIEHVQLRKKHDHSVPPAD 110
G ++ P HP D EH+ ++ H + D
Sbjct: 383 GKEKTCYYPYHPSTQEDSEEHLTPKRFHSRAASKED 418
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/36 (25%), Positives = 15/36 (41%)
Frame = +3
Query: 3 GVQRQSSLPAHPDRWPDDIEHVQLRKKHDHSVPPAD 110
G ++ P HP D EH+ ++ H + D
Sbjct: 383 GKEKTCYYPYHPSTQEDSEEHLTPKRFHSRAASKED 418
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.2 bits (45), Expect = 3.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 454 GTLRVENRTGGSSVTPNDASRKVGTKKAFLFA 549
G L + GG+S PN +R V +A LFA
Sbjct: 60 GGLFPVHEKGGASCGPNVYNRGVQRLEAMLFA 91
>AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding
protein protein.
Length = 132
Score = 21.8 bits (44), Expect = 5.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 183 VKVHINSGKCVLHTKEPLKDDEIKLE 260
V++ N+G L T P K+ EIK +
Sbjct: 41 VELTENNGLYTLKTTSPFKNTEIKFK 66
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/24 (29%), Positives = 9/24 (37%)
Frame = -1
Query: 85 CFFRSCTCSMSSGQRSGCAGSELW 14
C F +C C M+ C W
Sbjct: 750 CDFDACDCEMTCPAGCKCYNDRTW 773
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.0 bits (42), Expect = 9.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 178 SSKSMFGSAVLALFCLLLSEPGPSAGGTE 92
S K FG ++L+ EPGP G E
Sbjct: 6 SGKVHFGVDDVSLYGTPKEEPGPGLPGQE 34
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.0 bits (42), Expect = 9.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 178 SSKSMFGSAVLALFCLLLSEPGPSAGGTE 92
S K FG ++L+ EPGP G E
Sbjct: 6 SGKVHFGVDDVSLYGTPKEEPGPGLPGQE 34
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.0 bits (42), Expect = 9.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 178 SSKSMFGSAVLALFCLLLSEPGPSAGGTE 92
S K FG ++L+ EPGP G E
Sbjct: 6 SGKVHFGVDDVSLYGTPKEEPGPGLPGQE 34
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.0 bits (42), Expect = 9.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 202 LLMCTLTSSSKSMFGSAVLALFC 134
L++C L+ S+ S+ G + L C
Sbjct: 223 LVICKLSHSNASVAGGMEMILLC 245
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.0 bits (42), Expect = 9.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 202 LLMCTLTSSSKSMFGSAVLALFC 134
L++C L+ S+ S+ G + L C
Sbjct: 223 LVICKLSHSNASVAGGMEMILLC 245
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1
Query: 76 RSCTCSMSSGQR 41
RSC C SG+R
Sbjct: 73 RSCMCCQESGER 84
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,693
Number of Sequences: 438
Number of extensions: 3382
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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