Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0534
         (280 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   3.3  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    19   9.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    19   9.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    19   9.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    19   9.9  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 170 TPLGYDKNNLGKV 208
           TP+GY +N +G V
Sbjct: 398 TPVGYHQNEVGGV 410


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 268 RWYLPRVLTRRL 233
           R+YL + +TRRL
Sbjct: 237 RYYLEKKVTRRL 248


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 48  FNNAHENVGCYVLHQSHL 101
           +N  H N   Y+ HQ+++
Sbjct: 361 YNKNHPNSENYINHQNYV 378


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 268 RWYLPRVLTRRL 233
           R+YL + +TRRL
Sbjct: 237 RYYLEKKVTRRL 248


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 48  FNNAHENVGCYVLHQSHL 101
           +N  H N   Y+ HQ+++
Sbjct: 309 YNKNHPNSENYINHQNYV 326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,799
Number of Sequences: 336
Number of extensions: 1083
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4684108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)