BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0534 (280 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81555-6|CAJ85762.1| 709|Caenorhabditis elegans Hypothetical pr... 27 2.0 Z81555-5|CAB04517.2| 694|Caenorhabditis elegans Hypothetical pr... 27 2.0 Z54236-6|CAA90981.3| 465|Caenorhabditis elegans Hypothetical pr... 26 3.5 >Z81555-6|CAJ85762.1| 709|Caenorhabditis elegans Hypothetical protein F58E10.1b protein. Length = 709 Score = 27.1 bits (57), Expect = 2.0 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +2 Query: 182 YDKNNLGKVALPSFTDSKTSC 244 Y K L +VA+PS T+S SC Sbjct: 503 YHKRRLKRVAVPSVTESNESC 523 >Z81555-5|CAB04517.2| 694|Caenorhabditis elegans Hypothetical protein F58E10.1a protein. Length = 694 Score = 27.1 bits (57), Expect = 2.0 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +2 Query: 182 YDKNNLGKVALPSFTDSKTSC 244 Y K L +VA+PS T+S SC Sbjct: 488 YHKRRLKRVAVPSVTESNESC 508 >Z54236-6|CAA90981.3| 465|Caenorhabditis elegans Hypothetical protein C27B7.6 protein. Length = 465 Score = 26.2 bits (55), Expect = 3.5 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +1 Query: 37 TFEYLTMLMKTLAAMYFTSHTSHVRAVCT 123 TFE+ L+ +A Y++ H S++ +V T Sbjct: 271 TFEFDNRLLTVFSAPYYSGHNSNLGSVAT 299 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,091,244 Number of Sequences: 27780 Number of extensions: 93861 Number of successful extensions: 134 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 134 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 134 length of database: 12,740,198 effective HSP length: 69 effective length of database: 10,823,378 effective search space used: 248937694 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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