Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0533
         (654 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    42   0.013
UniRef50_Q74DZ9 Cluster: Phosphoenolpyruvate-protein phosphotran...    35   1.5  
UniRef50_Q39DV3 Cluster: Putative uncharacterized protein; n=13;...    35   2.0  
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   2.0  
UniRef50_UPI00006CD1CC Cluster: hypothetical protein TTHERM_0012...    33   4.5  
UniRef50_Q0UFH6 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_UPI000023D52A Cluster: predicted protein; n=1; Gibberel...    33   6.0  
UniRef50_A5DE84 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 41.9 bits (94), Expect = 0.013
 Identities = 21/38 (55%), Positives = 22/38 (57%)
 Frame = +3

Query: 3   FLLHRWVDELTAHLVLSGYRXXXXXXXXXXXXXXRYEF 116
           FLL RWVDELTAHLVLSGY               RY+F
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSPRHLYDVNAPPTSRYKF 191


>UniRef50_Q74DZ9 Cluster: Phosphoenolpyruvate-protein
           phosphotransferase PtsP; n=8; Desulfuromonadales|Rep:
           Phosphoenolpyruvate-protein phosphotransferase PtsP -
           Geobacter sulfurreducens
          Length = 569

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = +2

Query: 524 REEFHHKVRSYLKFRRGVFISIYRRIVERISKDPVAPRTLEGG 652
           R EF +  RS    R  +F S+YRR++E  S +PV  RTL+ G
Sbjct: 291 RTEFPYMTRSAFPSRDALF-SLYRRVLEGFSPNPVTIRTLDIG 332


>UniRef50_Q39DV3 Cluster: Putative uncharacterized protein; n=13;
           Bacteria|Rep: Putative uncharacterized protein -
           Burkholderia sp. (strain 383) (Burkholderia cepacia
           (strain ATCC 17760/ NCIB 9086 / R18194))
          Length = 1360

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +2

Query: 140 GCPILETETHYCFTAETGRVVV-PTRVDSQGVLPPVKSFIID*GTTKSAGSAS 295
           G P +  ++    +A  GRV +  TR+  +G    +KSF+ D G  +SAGS S
Sbjct: 739 GTPAIALQSPLTVSAGAGRVTLGATRLTLEGAAIDLKSFVFDHGQMRSAGSVS 791


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +3

Query: 189 QAGWWYLPVWTHKGSYHQ 242
           +A WWYLP  THK SYH+
Sbjct: 568 RAEWWYLPARTHKRSYHR 585


>UniRef50_UPI00006CD1CC Cluster: hypothetical protein
           TTHERM_00129630; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00129630 - Tetrahymena
           thermophila SB210
          Length = 1586

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 468 VTSLLCNTTNGLCIFCSGSGKN 533
           +++ +CN  +G C+ CSGSGKN
Sbjct: 175 LSNAICNACDGTCLTCSGSGKN 196


>UniRef50_Q0UFH6 Cluster: Putative uncharacterized protein; n=1;
            Phaeosphaeria nodorum|Rep: Putative uncharacterized
            protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 4353

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +3

Query: 159  PKRITASRQKQAGWWYLPVWTHKGSYHQ*SLLLSIEALRSL 281
            P ++   RQK  G WY  V  H   Y   SL L I+AL+S+
Sbjct: 2978 PLQLVGVRQKSNGTWYWEVVLHHAIYDGWSLSLIIDALKSI 3018


>UniRef50_UPI000023D52A Cluster: predicted protein; n=1; Gibberella
           zeae PH-1|Rep: predicted protein - Gibberella zeae PH-1
          Length = 222

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
 Frame = +2

Query: 452 APPLWRHVASLQYNQWSVHLLFRKREEFHHKVRSYL---KFRRGVFISIYRRIVERISKD 622
           AP  W H+  + Y+    +  F+K   +H   R+YL   +FR G++I+   R +   S+ 
Sbjct: 116 APKGWEHLHPIIYDGQQEYHGFKKFPRYHANQRAYLVTREFRDGIYIATAIRNLSACSQR 175

Query: 623 PVAPRTLEG 649
            +  R LEG
Sbjct: 176 EIV-RLLEG 183


>UniRef50_A5DE84 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 708

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = +2

Query: 131 SYNGCPILETETHY-CFTAETGRVVVPTRVD-SQGVLPPVK 247
           SY+GC IL+   H    ++ETG+ VVPT+ D S+  L P++
Sbjct: 132 SYDGCLILQVYDHRNMISSETGKPVVPTKEDPSEKRLSPLQ 172


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,914,628
Number of Sequences: 1657284
Number of extensions: 12544887
Number of successful extensions: 28109
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28104
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)