Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0533
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    26   0.31 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   1.3  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   6.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   6.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.7  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   6.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   6.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.9  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   8.9  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 514 VQEAGRISS-QGSFVFEIQKRGLHLHLSPNSRTNIEGS 624
           V +AGR S  Q   +    +RGL LH +P+ R  ++G+
Sbjct: 5   VGDAGRASKGQDKHMVHWFRRGLRLHDNPSLREGLKGA 42


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -2

Query: 176 SSNAFRFQGWGSRCNYTETLELIS*GGWR 90
           + N+ ++ G      Y E +EL   GGW+
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWK 312


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +3

Query: 162 KRITASRQKQAGWWYLP 212
           ++I  +  +   WWYLP
Sbjct: 264 RQIALTVPRYQAWWYLP 280


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +3

Query: 162 KRITASRQKQAGWWYLP 212
           ++I  +  +   WWYLP
Sbjct: 264 RQIALTVPRYQAWWYLP 280


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +3

Query: 162 KRITASRQKQAGWWYLP 212
           ++I  +  +   WWYLP
Sbjct: 264 RQIALTVPRYQAWWYLP 280


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +3

Query: 162 KRITASRQKQAGWWYLP 212
           ++I  +  +   WWYLP
Sbjct: 264 RQIALTVPRYQAWWYLP 280


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +3

Query: 162 KRITASRQKQAGWWYLP 212
           ++I  +  +   WWYLP
Sbjct: 264 RQIALTVPRYQAWWYLP 280


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 351 LCTYFFCR 374
           LC Y+FCR
Sbjct: 296 LCIYYFCR 303


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 230 PLVSPHG*VPPP 195
           P V PH  VPPP
Sbjct: 12  PTVLPHQEVPPP 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,096
Number of Sequences: 336
Number of extensions: 3296
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)