Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0533
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein...    25   2.8  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    23   6.4  
EF588645-1|ABQ96833.1|  161|Anopheles gambiae transposase protein.     23   8.4  
EF588613-1|ABQ96804.1|  161|Anopheles gambiae transposase protein.     23   8.4  

>Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 8/29 (27%), Positives = 20/29 (68%)
 Frame = +1

Query: 61  EAHRHLQRKCRHPPQDMSSKVSV*LQRLP 147
           +A+R L+++C+    + ++KV+   ++LP
Sbjct: 68  QAYRELKQRCQEAHDERTAKVNAIYEKLP 96


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 198 WWYLPVWTHKGSY 236
           +W++PVWT   +Y
Sbjct: 159 FWFMPVWTTYSAY 171


>EF588645-1|ABQ96833.1|  161|Anopheles gambiae transposase protein.
          Length = 161

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -3

Query: 400 TKTTRRGISRQKK*VHSVVFYCPDNTPIVNEI 305
           TK T   + R    VH  V Y   N PI   I
Sbjct: 35  TKGTNSNLKRDLNLVHKTVPYLKQNQPIPQTI 66


>EF588613-1|ABQ96804.1|  161|Anopheles gambiae transposase protein.
          Length = 161

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -3

Query: 400 TKTTRRGISRQKK*VHSVVFYCPDNTPIVNEI 305
           TK T   + R    VH  V Y   N PI   I
Sbjct: 35  TKGTNSNLKRDLNLVHKTVPYLKQNQPIPQTI 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,620
Number of Sequences: 2352
Number of extensions: 13842
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)