Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0533
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC028581-1|AAH28581.1|  861|Homo sapiens piwi-like 1 (Drosophila...    30   6.3  
AK093133-1|BAC04068.1|  829|Homo sapiens protein ( Homo sapiens ...    30   6.3  
AF387507-1|AAK69348.1|  861|Homo sapiens PIWI protein protein.         30   6.3  
AF264004-1|AAK92281.1|  775|Homo sapiens HIWI protein.                 30   6.3  
AB274731-1|BAF49084.1|  530|Homo sapiens piwi-like 1 protein.          30   6.3  
AF104260-1|AAC97371.2|  861|Homo sapiens HIWI protein.                 30   8.3  

>BC028581-1|AAH28581.1|  861|Homo sapiens piwi-like 1 (Drosophila)
           protein.
          Length = 861

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -3

Query: 592 IDGDEDPSSEFQIRTNLVMKFFPLPEQKMHRPLVVLQRSDVT--PERRRAPGGT 437
           ID D++P S F+      + F     ++ ++ +  L++  +   P+RRR PGGT
Sbjct: 322 IDWDQNPKSTFKKADGSEVSFLEYYRKQYNQEITDLKQPVLVSQPKRRRGPGGT 375


>AK093133-1|BAC04068.1|  829|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35814 fis, clone TESTI2006083, highly similar to
           Mus musculus mRNA for MIWI (piwi). ).
          Length = 829

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -3

Query: 592 IDGDEDPSSEFQIRTNLVMKFFPLPEQKMHRPLVVLQRSDVT--PERRRAPGGT 437
           ID D++P S F+      + F     ++ ++ +  L++  +   P+RRR PGGT
Sbjct: 322 IDWDQNPKSTFKKADGSEVSFLEYYRKQYNQEITDLKQPVLVSQPKRRRGPGGT 375


>AF387507-1|AAK69348.1|  861|Homo sapiens PIWI protein protein.
          Length = 861

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -3

Query: 592 IDGDEDPSSEFQIRTNLVMKFFPLPEQKMHRPLVVLQRSDVT--PERRRAPGGT 437
           ID D++P S F+      + F     ++ ++ +  L++  +   P+RRR PGGT
Sbjct: 322 IDWDQNPKSTFKKADGSEVSFLEYYRKQYNQEITDLKQPVLVSQPKRRRGPGGT 375


>AF264004-1|AAK92281.1|  775|Homo sapiens HIWI protein.
          Length = 775

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -3

Query: 592 IDGDEDPSSEFQIRTNLVMKFFPLPEQKMHRPLVVLQRSDVT--PERRRAPGGT 437
           ID D++P S F+      + F     ++ ++ +  L++  +   P+RRR PGGT
Sbjct: 236 IDWDQNPKSTFKKADGSEVSFLEYYRKQYNQEITDLKQPVLVSQPKRRRGPGGT 289


>AB274731-1|BAF49084.1|  530|Homo sapiens piwi-like 1 protein.
          Length = 530

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -3

Query: 592 IDGDEDPSSEFQIRTNLVMKFFPLPEQKMHRPLVVLQRSDVT--PERRRAPGGT 437
           ID D++P S F+      + F     ++ ++ +  L++  +   P+RRR PGGT
Sbjct: 322 IDWDQNPKSTFKKADGSEVSFLEYYRKQYNQKITDLKQPVLVSQPKRRRGPGGT 375


>AF104260-1|AAC97371.2|  861|Homo sapiens HIWI protein.
          Length = 861

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -3

Query: 592 IDGDEDPSSEFQIRTNLVMKFFPLPEQKMHRPLVVLQRSDVT--PERRRAPGGT 437
           ID D++P S F+      + F     ++ ++ +  L++  +   P+RRR PGGT
Sbjct: 322 IDWDQNPKSTFKKADGSGVSFLEYYRKQYNQEITDLKQPVLVSQPKRRRGPGGT 375


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,418,728
Number of Sequences: 237096
Number of extensions: 1996508
Number of successful extensions: 3505
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3505
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)