Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0533
         (654 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001890-1|AAN71679.1|  566|Drosophila melanogaster SD16013p pro...    31   1.8  
AY752878-1|AAV33343.1|  593|Drosophila melanogaster TAF6-like pr...    31   1.8  
AE014297-268|AAF52013.3|  589|Drosophila melanogaster CG10390-PA...    31   1.8  
AE014296-1114|AAN12095.1|  127|Drosophila melanogaster CG32398-P...    28   9.6  

>BT001890-1|AAN71679.1|  566|Drosophila melanogaster SD16013p
           protein.
          Length = 566

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 285 PADFVVPQSIIKDFTGGRTPCESTR 211
           P+DFVVPQ ++  F  G  P  S R
Sbjct: 532 PSDFVVPQLVVNQFKNGLIPSNSQR 556


>AY752878-1|AAV33343.1|  593|Drosophila melanogaster TAF6-like
           protein protein.
          Length = 593

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 285 PADFVVPQSIIKDFTGGRTPCESTR 211
           P+DFVVPQ ++  F  G  P  S R
Sbjct: 532 PSDFVVPQLVVNQFKNGLIPSNSQR 556


>AE014297-268|AAF52013.3|  589|Drosophila melanogaster CG10390-PA
           protein.
          Length = 589

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 285 PADFVVPQSIIKDFTGGRTPCESTR 211
           P+DFVVPQ ++  F  G  P  S R
Sbjct: 528 PSDFVVPQLVVNQFKNGLIPSNSQR 552


>AE014296-1114|AAN12095.1|  127|Drosophila melanogaster CG32398-PA
           protein.
          Length = 127

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +1

Query: 1   FFCCIDGWTSSQPTWC*VVTEAHRHLQRKCRHPPQDMSSKVSV 129
           FF C+  W +S  TW    +E+HR+        PQ   S++ +
Sbjct: 76  FFVCLYIWAASSSTWRQQQSESHRNADLAGFSEPQCPGSRLPI 118


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,432,149
Number of Sequences: 53049
Number of extensions: 614190
Number of successful extensions: 1409
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1409
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)